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The map label for this gene is ydjI [H]

Identifier: 124485294

GI number: 124485294

Start: 446863

End: 448083

Strand: Reverse

Name: ydjI [H]

Synonym: Mlab_0469

Alternate gene names: 124485294

Gene position: 448083-446863 (Counterclockwise)

Preceding gene: 124485295

Following gene: 124485288

Centisome position: 24.83

GC content: 55.04

Gene sequence:

>1221_bases
ATGAGTTTCTTCTCAAAAACAAACAAAACCATCGGCTCCGGTTCGGATATCGAGGGTGCAGAATCCAGAAAAGGCTTCTA
CTGGGTCGATGATCAGAAGGGTGACAACGTCATCTGGCGTCTCCCAAGAAACGTTATGTGGAACGACAACGTGCTCGTCC
GCGAGGATGAGTATGGTATCTTCTTCCGGGACGGGAAAGCTCTCGTCGTTTTCGACCGCCCCGACAGATATGCCCTGACG
ACCGAGAACATCCCGGTCCTGAAAAGTATTCTTGGAACTGTTGTTGGAAACGTTCAGATCGGAGAGTTCTACTGGGCACA
GAAGCGTGAGTTCCGGGATAAGTTCGGGACTCCGCAGCCTCTTGCATTCCGCGATGTGGACTTCGGTGTTGTCCAGCTCA
GAATCTTCGGTCAGTTCTCCTACAAAGTTGTCGATCCGCTGCTTCTGATCACCCAGTTCGTCGGAACAAAAGGCCTGACG
AAATCCGAGGAGATCGTCGAGTGGCTGAAATCGCAGATCGTGATGATCTTAAACGATACCCTCGGCGAGCTGAAAGCAAA
GAAGCAGATGGGTGTTCTGGATATGCCTGCATATCTGCAGGAGATCGAGCAGCTCTGCCTTGGCAAACTGACGACCGAGA
CAGAAGTGTACGGTCTGAAGATCATGAAGTTTGCCGGCCTGAACATCAACATGCCCGAAGAGGTTCAGGAAGCGATCAAC
AAACGCGGAGCAATGTCTGCTCTGGGCGTGAACTATCTCCAGTATGAGTCCGGAAAAGCTATCGAAGGCATCGGACAGGG
AGCCGCCCAAGGCGGAGAAGGCTCCGGATTTGCCATGATGGGTGCAGGAATGGGCGCCGGAATGAGCATGGGCGGCATGA
TGACCCAGAGCATGGCAGGTGCAGGAGGCCAGCCGGCTCCCTTTGGCGGTCAGCCGGGAGCAGGCCAGGCTGCAGCACAA
CAACCGACCGGGAAAATGGAGACATGCAGCAACTGCGGAGCAAAGGTCCCGGCAGGCACGAAGTTCTGCCCGGAGTGCGG
CCAGAAGATGGTGCCTGCGGGCGGTTCAACCTGCACAAACTGCGGAGCGACTCTTGCACCAGGCGCTAAATTCTGCCCCG
AGTGCGGTACAAAAGTCGAGACCATCAGGAGATGCCCGAAATGCAATGCCGTGGTCCCTGCCGGAACAAAGTTCTGTCCT
GAATGCGGACAGAAGCTCTAA

Upstream 100 bases:

>100_bases
AAACAGCAGACAGACTCCGGGAGATCAAATCCGGGTTCAGCGAGTTTACGGTAATTTTCGACAAACGCAGCGTTGACATG
GCAGGCATTGGTGCATTCTA

Downstream 100 bases:

>100_bases
TATTTTTCTTTTTTATCAGACCCGAAAACCGGGAAAAATACGTATCGTATTGAGAGAGAACTCATACTTCCGTTTCAAAA
AGAGCGTCCATTATTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSFFSKTNKTIGSGSDIEGAESRKGFYWVDDQKGDNVIWRLPRNVMWNDNVLVREDEYGIFFRDGKALVVFDRPDRYALT
TENIPVLKSILGTVVGNVQIGEFYWAQKREFRDKFGTPQPLAFRDVDFGVVQLRIFGQFSYKVVDPLLLITQFVGTKGLT
KSEEIVEWLKSQIVMILNDTLGELKAKKQMGVLDMPAYLQEIEQLCLGKLTTETEVYGLKIMKFAGLNINMPEEVQEAIN
KRGAMSALGVNYLQYESGKAIEGIGQGAAQGGEGSGFAMMGAGMGAGMSMGGMMTQSMAGAGGQPAPFGGQPGAGQAAAQ
QPTGKMETCSNCGAKVPAGTKFCPECGQKMVPAGGSTCTNCGATLAPGAKFCPECGTKVETIRRCPKCNAVVPAGTKFCP
ECGQKL

Sequences:

>Translated_406_residues
MSFFSKTNKTIGSGSDIEGAESRKGFYWVDDQKGDNVIWRLPRNVMWNDNVLVREDEYGIFFRDGKALVVFDRPDRYALT
TENIPVLKSILGTVVGNVQIGEFYWAQKREFRDKFGTPQPLAFRDVDFGVVQLRIFGQFSYKVVDPLLLITQFVGTKGLT
KSEEIVEWLKSQIVMILNDTLGELKAKKQMGVLDMPAYLQEIEQLCLGKLTTETEVYGLKIMKFAGLNINMPEEVQEAIN
KRGAMSALGVNYLQYESGKAIEGIGQGAAQGGEGSGFAMMGAGMGAGMSMGGMMTQSMAGAGGQPAPFGGQPGAGQAAAQ
QPTGKMETCSNCGAKVPAGTKFCPECGQKMVPAGGSTCTNCGATLAPGAKFCPECGTKVETIRRCPKCNAVVPAGTKFCP
ECGQKL
>Mature_405_residues
SFFSKTNKTIGSGSDIEGAESRKGFYWVDDQKGDNVIWRLPRNVMWNDNVLVREDEYGIFFRDGKALVVFDRPDRYALTT
ENIPVLKSILGTVVGNVQIGEFYWAQKREFRDKFGTPQPLAFRDVDFGVVQLRIFGQFSYKVVDPLLLITQFVGTKGLTK
SEEIVEWLKSQIVMILNDTLGELKAKKQMGVLDMPAYLQEIEQLCLGKLTTETEVYGLKIMKFAGLNINMPEEVQEAINK
RGAMSALGVNYLQYESGKAIEGIGQGAAQGGEGSGFAMMGAGMGAGMSMGGMMTQSMAGAGGQPAPFGGQPGAGQAAAQQ
PTGKMETCSNCGAKVPAGTKFCPECGQKMVPAGGSTCTNCGATLAPGAKFCPECGTKVETIRRCPKCNAVVPAGTKFCPE
CGQKL

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 43707; Mature: 43576

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFSKTNKTIGSGSDIEGAESRKGFYWVDDQKGDNVIWRLPRNVMWNDNVLVREDEYGI
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEECCCEEEEECCCEE
FFRDGKALVVFDRPDRYALTTENIPVLKSILGTVVGNVQIGEFYWAQKREFRDKFGTPQP
EEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCCC
LAFRDVDFGVVQLRIFGQFSYKVVDPLLLITQFVGTKGLTKSEEIVEWLKSQIVMILNDT
CEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEHHHHHH
LGELKAKKQMGVLDMPAYLQEIEQLCLGKLTTETEVYGLKIMKFAGLNINMPEEVQEAIN
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEEEEEECCCCCCHHHHHHHHH
KRGAMSALGVNYLQYESGKAIEGIGQGAAQGGEGSGFAMMGAGMGAGMSMGGMMTQSMAG
HCCCHHHHCCCCEEECCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCC
AGGQPAPFGGQPGAGQAAAQQPTGKMETCSNCGAKVPAGTKFCPECGQKMVPAGGSTCTN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCEECCCCCCCHHC
CGATLAPGAKFCPECGTKVETIRRCPKCNAVVPAGTKFCPECGQKL
CCCCCCCCCHHCHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
SFFSKTNKTIGSGSDIEGAESRKGFYWVDDQKGDNVIWRLPRNVMWNDNVLVREDEYGI
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEECCCEEEEECCCEE
FFRDGKALVVFDRPDRYALTTENIPVLKSILGTVVGNVQIGEFYWAQKREFRDKFGTPQP
EEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCCC
LAFRDVDFGVVQLRIFGQFSYKVVDPLLLITQFVGTKGLTKSEEIVEWLKSQIVMILNDT
CEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEHHHHHH
LGELKAKKQMGVLDMPAYLQEIEQLCLGKLTTETEVYGLKIMKFAGLNINMPEEVQEAIN
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEEEEEECCCCCCHHHHHHHHH
KRGAMSALGVNYLQYESGKAIEGIGQGAAQGGEGSGFAMMGAGMGAGMSMGGMMTQSMAG
HCCCHHHHCCCCEEECCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCC
AGGQPAPFGGQPGAGQAAAQQPTGKMETCSNCGAKVPAGTKFCPECGQKMVPAGGSTCTN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHCCEECCCCCCCHHC
CGATLAPGAKFCPECGTKVETIRRCPKCNAVVPAGTKFCPECGQKL
CCCCCCCCCHHCHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]