| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485248
Identifier: 124485248
GI number: 124485248
Start: 401787
End: 402689
Strand: Reverse
Name: 124485248
Synonym: Mlab_0421
Alternate gene names: NA
Gene position: 402689-401787 (Counterclockwise)
Preceding gene: 124485249
Following gene: 124485247
Centisome position: 22.31
GC content: 45.07
Gene sequence:
>903_bases ATGAAAAAAATTGATTTCAAAAAAATAACGCTCGCCGACAAACCACTTATCGAAGACTACTTCCGGCGATTTCCCCAGTA CCACTCGGAACATAACTTTCTCACCCTCCTCTGCTGGGAGCATTACTCTCATTGCGAATATGCCGTGATAAATGATCACC TGATCCTTTCCAACATGACCTGCGGACAATGCACATGTCATGCACCAATCGGTGAATTTGACCCGGCATTATTCGAAGAA CTTCTACAGTACACCAAAAAACATACAGGAGACTGCGCCGTTACCTTCCATGAAGACAAATATCTCCCATACATGAAACT GTATCATCCCGAAACACCAGTATATCAATCACGCGGCTGCAGCGATTATTATTACAGAACAAAAGAACTTGCAGAACTTG CCGGACAAAAATACCTCAACATCCGTAAACAGATCAACCAATTCAACACCAAATATCAGTACACCGTGGATCCAATCACC CCGGAAAGCATTCCCGAGATTCATGAGATGCTCGATAAATGGAGCGACGCCAAAAACACCGAGGTGAACTCAGTTCTCAA TGAAGAAGTGGGAGCAGCGCACGCAGCATTGAACCAATGGGATGAACTCGGATGTGAAGGGCTGATCATCCGCATCCTTC CCAAAAACAAAATAGGGGCTGTTGCCATTTGGGGGGAGATGAATAACGAGACTGCTGTCATCCATTTTGAGAAAGGCATA TCTCAGTATAAGGGCATCTATAAAGTCATCAATCAGGAGACCGCTAAAGCACTCTTGGGAAAATACAGCTGGATAAACCG CGAGTCCGACATGGATGTCCCCGGACTCCGCGAGGCAAAACTTCGGTATCATCCGGAAAAATGTGCGAAGATCTGGTACA TCAAACGAAAAGAGATACTTTGA
Upstream 100 bases:
>100_bases CTTACCTGGATCGGACTCATCTCCGCACCCCAAAAAGAATCGATCTACCTCAGAGCAGGCTTCTCTGAAATGAAAAACTA CACCCCGATGCTCTTTGAAA
Downstream 100 bases:
>100_bases TAGCCGCTTCAACAACCATCTGAAAAAATGCACAGATACCGGTGGACCCCACAGATATTATTAGCCAGACGGCACATGTA TAAAGCGGATGAACCTGTTG
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMTCGQCTCHAPIGEFDPALFEE LLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGCSDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPIT PESIPEIHEMLDKWSDAKNTEVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL
Sequences:
>Translated_300_residues MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMTCGQCTCHAPIGEFDPALFEE LLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGCSDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPIT PESIPEIHEMLDKWSDAKNTEVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL >Mature_300_residues MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMTCGQCTCHAPIGEFDPALFEE LLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGCSDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPIT PESIPEIHEMLDKWSDAKNTEVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL
Specific function: Unknown
COG id: COG4866
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35098; Mature: 35098
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMT CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECEEEEECCC CGQCTCHAPIGEFDPALFEELLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGC CCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCHHCCCC SDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPITPESIPEIHEMLDKWSDAKNT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCC EVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEHHHH SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHEEEHHCCC >Mature Secondary Structure MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMT CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECEEEEECCC CGQCTCHAPIGEFDPALFEELLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGC CCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCHHCCCC SDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPITPESIPEIHEMLDKWSDAKNT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCC EVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEHHHH SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHEEEHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA