Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485248

Identifier: 124485248

GI number: 124485248

Start: 401787

End: 402689

Strand: Reverse

Name: 124485248

Synonym: Mlab_0421

Alternate gene names: NA

Gene position: 402689-401787 (Counterclockwise)

Preceding gene: 124485249

Following gene: 124485247

Centisome position: 22.31

GC content: 45.07

Gene sequence:

>903_bases
ATGAAAAAAATTGATTTCAAAAAAATAACGCTCGCCGACAAACCACTTATCGAAGACTACTTCCGGCGATTTCCCCAGTA
CCACTCGGAACATAACTTTCTCACCCTCCTCTGCTGGGAGCATTACTCTCATTGCGAATATGCCGTGATAAATGATCACC
TGATCCTTTCCAACATGACCTGCGGACAATGCACATGTCATGCACCAATCGGTGAATTTGACCCGGCATTATTCGAAGAA
CTTCTACAGTACACCAAAAAACATACAGGAGACTGCGCCGTTACCTTCCATGAAGACAAATATCTCCCATACATGAAACT
GTATCATCCCGAAACACCAGTATATCAATCACGCGGCTGCAGCGATTATTATTACAGAACAAAAGAACTTGCAGAACTTG
CCGGACAAAAATACCTCAACATCCGTAAACAGATCAACCAATTCAACACCAAATATCAGTACACCGTGGATCCAATCACC
CCGGAAAGCATTCCCGAGATTCATGAGATGCTCGATAAATGGAGCGACGCCAAAAACACCGAGGTGAACTCAGTTCTCAA
TGAAGAAGTGGGAGCAGCGCACGCAGCATTGAACCAATGGGATGAACTCGGATGTGAAGGGCTGATCATCCGCATCCTTC
CCAAAAACAAAATAGGGGCTGTTGCCATTTGGGGGGAGATGAATAACGAGACTGCTGTCATCCATTTTGAGAAAGGCATA
TCTCAGTATAAGGGCATCTATAAAGTCATCAATCAGGAGACCGCTAAAGCACTCTTGGGAAAATACAGCTGGATAAACCG
CGAGTCCGACATGGATGTCCCCGGACTCCGCGAGGCAAAACTTCGGTATCATCCGGAAAAATGTGCGAAGATCTGGTACA
TCAAACGAAAAGAGATACTTTGA

Upstream 100 bases:

>100_bases
CTTACCTGGATCGGACTCATCTCCGCACCCCAAAAAGAATCGATCTACCTCAGAGCAGGCTTCTCTGAAATGAAAAACTA
CACCCCGATGCTCTTTGAAA

Downstream 100 bases:

>100_bases
TAGCCGCTTCAACAACCATCTGAAAAAATGCACAGATACCGGTGGACCCCACAGATATTATTAGCCAGACGGCACATGTA
TAAAGCGGATGAACCTGTTG

Product: CopG family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMTCGQCTCHAPIGEFDPALFEE
LLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGCSDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPIT
PESIPEIHEMLDKWSDAKNTEVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI
SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL

Sequences:

>Translated_300_residues
MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMTCGQCTCHAPIGEFDPALFEE
LLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGCSDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPIT
PESIPEIHEMLDKWSDAKNTEVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI
SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL
>Mature_300_residues
MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMTCGQCTCHAPIGEFDPALFEE
LLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGCSDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPIT
PESIPEIHEMLDKWSDAKNTEVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI
SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35098; Mature: 35098

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMT
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECEEEEECCC
CGQCTCHAPIGEFDPALFEELLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGC
CCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCHHCCCC
SDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPITPESIPEIHEMLDKWSDAKNT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
EVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEHHHH
SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHEEEHHCCC
>Mature Secondary Structure
MKKIDFKKITLADKPLIEDYFRRFPQYHSEHNFLTLLCWEHYSHCEYAVINDHLILSNMT
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECEEEEECCC
CGQCTCHAPIGEFDPALFEELLQYTKKHTGDCAVTFHEDKYLPYMKLYHPETPVYQSRGC
CCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCHHCCCC
SDYYYRTKELAELAGQKYLNIRKQINQFNTKYQYTVDPITPESIPEIHEMLDKWSDAKNT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCC
EVNSVLNEEVGAAHAALNQWDELGCEGLIIRILPKNKIGAVAIWGEMNNETAVIHFEKGI
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEHHHH
SQYKGIYKVINQETAKALLGKYSWINRESDMDVPGLREAKLRYHPEKCAKIWYIKRKEIL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA