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The map label for this gene is 124485247

Identifier: 124485247

GI number: 124485247

Start: 400745

End: 401698

Strand: Reverse

Name: 124485247

Synonym: Mlab_0420

Alternate gene names: NA

Gene position: 401698-400745 (Counterclockwise)

Preceding gene: 124485248

Following gene: 124485246

Centisome position: 22.26

GC content: 52.62

Gene sequence:

>954_bases
ATGAACCTGTTGTTTGAACTCTCCGGAGAGAACCAGCCTCTGGCAGTTGCCGAGATCTCCTGTGCGGGTAATGTGACCCG
CACGGAAAACGGCATTGCCATAGCTGACGTAAATGATCCGGAAAGAACGACACGGCTCGCACAGACGCATGTAGTCATGC
GTCTCCTTGGAGAATGCGATGCATCAAAGGAAGACCTTGAAAGGCTCCTTGACCATCTCGCGCTCACGGCCCCCGGCAGA
TTCTGCTGTCGGGTAAGAAAGATTCATCCTGTCACCGTCAATGCATCCCAACTGGAACTCGAGCGCATGATGGGACAAAA
AATTCACGGGACTGTTGACCTGAACACTCCCGATGTAGAATATCGTGCCGTCTTTACCAACGGCAGATGCTTCTTTGGAG
AAGTCCTGCACACCATAGACCGCGGATCTTACGCCTACCGAAACCCTCAGAGAAGAGCATTTTTCCATCCAGGCGTCATG
ATGCCCCTTATGGCACGAACCATGGTCAATCTGACCCATGTCGAGCCGGGAGAGAAATTGTGCGACCCGTTCTGCGGAAC
CGGAGGCATGCTCCTTGAATGTGAAATGATGGGGATTGATGCGGTCGGGAGCGACTACGACCCCGAGATGCTTATCGGAT
GCAAACAGAATCTGCCGAACGGAGCCTGCATCCGGGCCGATGCAACAAAGATGCCCTATCCAGACGAAGCGTTCGACGCG
ATCGCAACCGACCTGCCGTACGGTCAGTCAACTACCATCGGAGCCGAAAGCATCGATACCTTGTACACGGAATCACTTAA
GGAAATCAGGCGTGTTCTGAAACAAGGGGGCAGGGCAGTCATCGTGACTCATAAAGACATCAGACCTCTGGCAAAAGATC
TCTTTGAAATCGTTGGTTACTACGAACAGAGGGTGCATAAAAGTCTCACGCGAAGGATACTCGTCCTCGCATAA

Upstream 100 bases:

>100_bases
GAGATACTTTGATAGCCGCTTCAACAACCATCTGAAAAAATGCACAGATACCGGTGGACCCCACAGATATTATTAGCCAG
ACGGCACATGTATAAAGCGG

Downstream 100 bases:

>100_bases
AATAAAAGTATGAAACAAACAAGCGGAGAGTTGTAATGCTCTCGTGGATTAGTGAGCAGTTCAGCCACTACAAGCCTGAC
CGGGCAATCGCAGTGAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNLLFELSGENQPLAVAEISCAGNVTRTENGIAIADVNDPERTTRLAQTHVVMRLLGECDASKEDLERLLDHLALTAPGR
FCCRVRKIHPVTVNASQLELERMMGQKIHGTVDLNTPDVEYRAVFTNGRCFFGEVLHTIDRGSYAYRNPQRRAFFHPGVM
MPLMARTMVNLTHVEPGEKLCDPFCGTGGMLLECEMMGIDAVGSDYDPEMLIGCKQNLPNGACIRADATKMPYPDEAFDA
IATDLPYGQSTTIGAESIDTLYTESLKEIRRVLKQGGRAVIVTHKDIRPLAKDLFEIVGYYEQRVHKSLTRRILVLA

Sequences:

>Translated_317_residues
MNLLFELSGENQPLAVAEISCAGNVTRTENGIAIADVNDPERTTRLAQTHVVMRLLGECDASKEDLERLLDHLALTAPGR
FCCRVRKIHPVTVNASQLELERMMGQKIHGTVDLNTPDVEYRAVFTNGRCFFGEVLHTIDRGSYAYRNPQRRAFFHPGVM
MPLMARTMVNLTHVEPGEKLCDPFCGTGGMLLECEMMGIDAVGSDYDPEMLIGCKQNLPNGACIRADATKMPYPDEAFDA
IATDLPYGQSTTIGAESIDTLYTESLKEIRRVLKQGGRAVIVTHKDIRPLAKDLFEIVGYYEQRVHKSLTRRILVLA
>Mature_317_residues
MNLLFELSGENQPLAVAEISCAGNVTRTENGIAIADVNDPERTTRLAQTHVVMRLLGECDASKEDLERLLDHLALTAPGR
FCCRVRKIHPVTVNASQLELERMMGQKIHGTVDLNTPDVEYRAVFTNGRCFFGEVLHTIDRGSYAYRNPQRRAFFHPGVM
MPLMARTMVNLTHVEPGEKLCDPFCGTGGMLLECEMMGIDAVGSDYDPEMLIGCKQNLPNGACIRADATKMPYPDEAFDA
IATDLPYGQSTTIGAESIDTLYTESLKEIRRVLKQGGRAVIVTHKDIRPLAKDLFEIVGYYEQRVHKSLTRRILVLA

Specific function: Unknown

COG id: COG1041

COG function: function code L; Predicted DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI32566195, Length=153, Percent_Identity=31.3725490196078, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005885
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 35288; Mature: 35288

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS01261 UPF0020

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLFELSGENQPLAVAEISCAGNVTRTENGIAIADVNDPERTTRLAQTHVVMRLLGECD
CCEEEEECCCCCCEEEEEEECCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
ASKEDLERLLDHLALTAPGRFCCRVRKIHPVTVNASQLELERMMGQKIHGTVDLNTPDVE
CCHHHHHHHHHHHHHCCCCHHHHEEEEECEEEECHHHHHHHHHHCCCCCCEEECCCCCCE
YRAVFTNGRCFFGEVLHTIDRGSYAYRNPQRRAFFHPGVMMPLMARTMVNLTHVEPGEKL
EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHH
CDPFCGTGGMLLECEMMGIDAVGSDYDPEMLIGCKQNLPNGACIRADATKMPYPDEAFDA
HCCCCCCCCEEEEEEEECCCCCCCCCCCHHEEEHHCCCCCCCEEEECCCCCCCCCHHHHH
IATDLPYGQSTTIGAESIDTLYTESLKEIRRVLKQGGRAVIVTHKDIRPLAKDLFEIVGY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
YEQRVHKSLTRRILVLA
HHHHHHHHHHHHEEECC
>Mature Secondary Structure
MNLLFELSGENQPLAVAEISCAGNVTRTENGIAIADVNDPERTTRLAQTHVVMRLLGECD
CCEEEEECCCCCCEEEEEEECCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
ASKEDLERLLDHLALTAPGRFCCRVRKIHPVTVNASQLELERMMGQKIHGTVDLNTPDVE
CCHHHHHHHHHHHHHCCCCHHHHEEEEECEEEECHHHHHHHHHHCCCCCCEEECCCCCCE
YRAVFTNGRCFFGEVLHTIDRGSYAYRNPQRRAFFHPGVMMPLMARTMVNLTHVEPGEKL
EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHH
CDPFCGTGGMLLECEMMGIDAVGSDYDPEMLIGCKQNLPNGACIRADATKMPYPDEAFDA
HCCCCCCCCEEEEEEEECCCCCCCCCCCHHEEEHHCCCCCCCEEEECCCCCCCCCHHHHH
IATDLPYGQSTTIGAESIDTLYTESLKEIRRVLKQGGRAVIVTHKDIRPLAKDLFEIVGY
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH
YEQRVHKSLTRRILVLA
HHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]