Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485233

Identifier: 124485233

GI number: 124485233

Start: 384977

End: 385750

Strand: Reverse

Name: 124485233

Synonym: Mlab_0406

Alternate gene names: NA

Gene position: 385750-384977 (Counterclockwise)

Preceding gene: 124485246

Following gene: 124485228

Centisome position: 21.37

GC content: 47.93

Gene sequence:

>774_bases
ATGGCACGGACTAACATTCAGTTACTTATATTGGAGAGTATGAGAGATAATGTTTCACATATGGGTTTGGCGGTTATATG
GAATGGATACATAATTCCCATTGAGGTCATTTATTCGGATCGGAGAAGATCCTGGGCGATCGAAGTTAAGACGAACGGCG
AGGTGCTGATACGCGTTCCAAAAGCCACTTCCTTGGAAAAAGTTCAGGAGATCGCACAGAGCAAAGCCGAGTGGATCGCA
AAACAGCAGGCTCTGTTTCAAAACAGGGACACAAAACCCAGAAGCTACAGTGATGGGGAAGTAATTCCATTTTTCGGGGA
AGACCTGACCATACAACGGAGTGCCGGACCCGCCAAAGCGGAGATCGCGGGAGAAGTTCTTCACATATCAACACCGGATT
CCTTTACGCCGGATGAAGCCGAAATGATTGCCCGCGATGTGGTAATGCTTTTGTACAGGCGTCGTGGACCCGCGGTTCTG
GATGCATATGTGGAAAAGTATGCGGAGCTTGCCGGCGTGACGAAGCCAAACCTGCGAATGAAGCTGCAGAAGAAAAAATG
GGGATGTTGTACTCCAAAAAATGGGATAATCATCAATGCACGAGTGCTGCTTGCCCCAAAAATCGTTGCCGAGTATCTGG
TCGTCCACGAAATAGTACATCTCAGATATCCCCACCATCAGAAAACCTACTGGAAAGAGGTCGAACGACTTATGCCCAAA
TACCGGGACGTCGAAAAACTGATGAAAGCCGACGGATGGAAATGGGAGTTTTGA

Upstream 100 bases:

>100_bases
GACGTTGATGACACCCTTTTCCATGCCCAGCATGACGATATATTCATCCGGAAAGCTTGATCTTCCCATCTCCAAAAGGA
GATCAAGTACTTCCTGATCT

Downstream 100 bases:

>100_bases
TTTTTGGAACCTGAGTTATTATCCATATCCTGAATTCCAAAAAAGGAATGAAGAAGGATTATGCTTGCTTTACAAATGAA
GTAATTCCAGTAGAGACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Zinc Metallopeptidase; Zinc Protease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Hydrolase; Protease; Zinc Metallo Protease

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVPKATSLEKVQEIAQSKAEWIA
KQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKAEIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVL
DAYVEKYAELAGVTKPNLRMKLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK
YRDVEKLMKADGWKWEF

Sequences:

>Translated_257_residues
MARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVPKATSLEKVQEIAQSKAEWIA
KQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKAEIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVL
DAYVEKYAELAGVTKPNLRMKLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK
YRDVEKLMKADGWKWEF
>Mature_256_residues
ARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVPKATSLEKVQEIAQSKAEWIAK
QQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKAEIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVLD
AYVEKYAELAGVTKPNLRMKLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPKY
RDVEKLMKADGWKWEF

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29629; Mature: 29498

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVP
CCCCCEEEEEEEHHHCCHHHCCEEEEECCEEEEEEEEECCCCCEEEEEEECCCEEEEEEC
KATSLEKVQEIAQSKAEWIAKQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCH
EIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVLDAYVEKYAELAGVTKPNLRM
HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEE
KLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK
EEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YRDVEKLMKADGWKWEF
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVP
CCCCEEEEEEEHHHCCHHHCCEEEEECCEEEEEEEEECCCCCEEEEEEECCCEEEEEEC
KATSLEKVQEIAQSKAEWIAKQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCH
EIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVLDAYVEKYAELAGVTKPNLRM
HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEE
KLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK
EEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YRDVEKLMKADGWKWEF
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA