| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485233
Identifier: 124485233
GI number: 124485233
Start: 384977
End: 385750
Strand: Reverse
Name: 124485233
Synonym: Mlab_0406
Alternate gene names: NA
Gene position: 385750-384977 (Counterclockwise)
Preceding gene: 124485246
Following gene: 124485228
Centisome position: 21.37
GC content: 47.93
Gene sequence:
>774_bases ATGGCACGGACTAACATTCAGTTACTTATATTGGAGAGTATGAGAGATAATGTTTCACATATGGGTTTGGCGGTTATATG GAATGGATACATAATTCCCATTGAGGTCATTTATTCGGATCGGAGAAGATCCTGGGCGATCGAAGTTAAGACGAACGGCG AGGTGCTGATACGCGTTCCAAAAGCCACTTCCTTGGAAAAAGTTCAGGAGATCGCACAGAGCAAAGCCGAGTGGATCGCA AAACAGCAGGCTCTGTTTCAAAACAGGGACACAAAACCCAGAAGCTACAGTGATGGGGAAGTAATTCCATTTTTCGGGGA AGACCTGACCATACAACGGAGTGCCGGACCCGCCAAAGCGGAGATCGCGGGAGAAGTTCTTCACATATCAACACCGGATT CCTTTACGCCGGATGAAGCCGAAATGATTGCCCGCGATGTGGTAATGCTTTTGTACAGGCGTCGTGGACCCGCGGTTCTG GATGCATATGTGGAAAAGTATGCGGAGCTTGCCGGCGTGACGAAGCCAAACCTGCGAATGAAGCTGCAGAAGAAAAAATG GGGATGTTGTACTCCAAAAAATGGGATAATCATCAATGCACGAGTGCTGCTTGCCCCAAAAATCGTTGCCGAGTATCTGG TCGTCCACGAAATAGTACATCTCAGATATCCCCACCATCAGAAAACCTACTGGAAAGAGGTCGAACGACTTATGCCCAAA TACCGGGACGTCGAAAAACTGATGAAAGCCGACGGATGGAAATGGGAGTTTTGA
Upstream 100 bases:
>100_bases GACGTTGATGACACCCTTTTCCATGCCCAGCATGACGATATATTCATCCGGAAAGCTTGATCTTCCCATCTCCAAAAGGA GATCAAGTACTTCCTGATCT
Downstream 100 bases:
>100_bases TTTTTGGAACCTGAGTTATTATCCATATCCTGAATTCCAAAAAAGGAATGAAGAAGGATTATGCTTGCTTTACAAATGAA GTAATTCCAGTAGAGACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Zinc Metallopeptidase; Zinc Protease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Hydrolase; Protease; Zinc Metallo Protease
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVPKATSLEKVQEIAQSKAEWIA KQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKAEIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVL DAYVEKYAELAGVTKPNLRMKLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK YRDVEKLMKADGWKWEF
Sequences:
>Translated_257_residues MARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVPKATSLEKVQEIAQSKAEWIA KQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKAEIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVL DAYVEKYAELAGVTKPNLRMKLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK YRDVEKLMKADGWKWEF >Mature_256_residues ARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVPKATSLEKVQEIAQSKAEWIAK QQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKAEIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVLD AYVEKYAELAGVTKPNLRMKLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPKY RDVEKLMKADGWKWEF
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29629; Mature: 29498
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVP CCCCCEEEEEEEHHHCCHHHCCEEEEECCEEEEEEEEECCCCCEEEEEEECCCEEEEEEC KATSLEKVQEIAQSKAEWIAKQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCH EIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVLDAYVEKYAELAGVTKPNLRM HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEE KLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK EEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YRDVEKLMKADGWKWEF HHHHHHHHHCCCCCCCC >Mature Secondary Structure ARTNIQLLILESMRDNVSHMGLAVIWNGYIIPIEVIYSDRRRSWAIEVKTNGEVLIRVP CCCCEEEEEEEHHHCCHHHCCEEEEECCEEEEEEEEECCCCCEEEEEEECCCEEEEEEC KATSLEKVQEIAQSKAEWIAKQQALFQNRDTKPRSYSDGEVIPFFGEDLTIQRSAGPAKA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCH EIAGEVLHISTPDSFTPDEAEMIARDVVMLLYRRRGPAVLDAYVEKYAELAGVTKPNLRM HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEE KLQKKKWGCCTPKNGIIINARVLLAPKIVAEYLVVHEIVHLRYPHHQKTYWKEVERLMPK EEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YRDVEKLMKADGWKWEF HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA