Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485228

Identifier: 124485228

GI number: 124485228

Start: 378229

End: 378741

Strand: Reverse

Name: 124485228

Synonym: Mlab_0401

Alternate gene names: NA

Gene position: 378741-378229 (Counterclockwise)

Preceding gene: 124485233

Following gene: 124485227

Centisome position: 20.98

GC content: 50.49

Gene sequence:

>513_bases
ATGGCCGACAAGAAGACAGTAACTATTGGAGTAACGATCAATCTGGGCAATTACGAAAGCCTGAGGGTTGAAGTATCCGA
TACAGCGGAAAATGAGGCAGCAGTCAGAGACCTTGCGGATTTTCTTGGAAGAACCCTGGACGAATTCGGGACAGGCGACC
CCTCAGCGAGAGCGGCCGTCGAGAGATATAAAGAACGGGTTCTCGACAAATACGCGCAGGAAGAAGAAGAGGAGGAAGCC
GGATATTATCCGATGAACGAGATGCCCCTTACGCACCCAGTCGAAGAGGAAGAGGAGGAGATTCCGATGCAGGTTCTGGA
GGATACGCGCATCGAAGTCCCGCCCGCCGAAGATGTCGAGGTCCCTGATACCAACATAAATCAGGCTCCCGTAGTTTCAC
CGACCGAAGGCGAGTTCGTCTGTGAAAAATGCGGCGTTTCGATATCCAAAGTGCAAAGAGATGTCTCCAATCTCTTTATG
GGGAAGACTCTCTGTAAAAAATGCATGAAATGA

Upstream 100 bases:

>100_bases
CAGCGGGGGTAACTTTCATCATCTGTCCGATTAACTATTATATCACTCATCAGTATCATTAATTCTTTGCAAAACATATG
AGAACTGTAGAATACTGCTT

Downstream 100 bases:

>100_bases
GGGGAAAATGAAAAAGAATCTGCTTATGTGGGACCAGACCCTTTTCAGAGACATAGAAGTCTTTGAAATCACCTATGTCC
CCGAGCAGTTCGATTACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MADKKTVTIGVTINLGNYESLRVEVSDTAENEAAVRDLADFLGRTLDEFGTGDPSARAAVERYKERVLDKYAQEEEEEEA
GYYPMNEMPLTHPVEEEEEEIPMQVLEDTRIEVPPAEDVEVPDTNINQAPVVSPTEGEFVCEKCGVSISKVQRDVSNLFM
GKTLCKKCMK

Sequences:

>Translated_170_residues
MADKKTVTIGVTINLGNYESLRVEVSDTAENEAAVRDLADFLGRTLDEFGTGDPSARAAVERYKERVLDKYAQEEEEEEA
GYYPMNEMPLTHPVEEEEEEIPMQVLEDTRIEVPPAEDVEVPDTNINQAPVVSPTEGEFVCEKCGVSISKVQRDVSNLFM
GKTLCKKCMK
>Mature_169_residues
ADKKTVTIGVTINLGNYESLRVEVSDTAENEAAVRDLADFLGRTLDEFGTGDPSARAAVERYKERVLDKYAQEEEEEEAG
YYPMNEMPLTHPVEEEEEEIPMQVLEDTRIEVPPAEDVEVPDTNINQAPVVSPTEGEFVCEKCGVSISKVQRDVSNLFMG
KTLCKKCMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19008; Mature: 18877

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKKTVTIGVTINLGNYESLRVEVSDTAENEAAVRDLADFLGRTLDEFGTGDPSARAAV
CCCCEEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ERYKERVLDKYAQEEEEEEAGYYPMNEMPLTHPVEEEEEEIPMQVLEDTRIEVPPAEDVE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCC
VPDTNINQAPVVSPTEGEFVCEKCGVSISKVQRDVSNLFMGKTLCKKCMK
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADKKTVTIGVTINLGNYESLRVEVSDTAENEAAVRDLADFLGRTLDEFGTGDPSARAAV
CCCEEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ERYKERVLDKYAQEEEEEEAGYYPMNEMPLTHPVEEEEEEIPMQVLEDTRIEVPPAEDVE
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCCC
VPDTNINQAPVVSPTEGEFVCEKCGVSISKVQRDVSNLFMGKTLCKKCMK
CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA