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The map label for this gene is slyA [C]

Identifier: 124485158

GI number: 124485158

Start: 313233

End: 313730

Strand: Reverse

Name: slyA [C]

Synonym: Mlab_0331

Alternate gene names: 124485158

Gene position: 313730-313233 (Counterclockwise)

Preceding gene: 124485161

Following gene: 124485155

Centisome position: 17.38

GC content: 44.38

Gene sequence:

>498_bases
TTGATTAATCAACTAATTTTGAGGGCCCGAAATACCATGGTAAAGGACGATAGTGAAACAACCACACAATGGATACAGGA
AATCGAAATGCCTGCTGCCCTGATTTCCTATATTTACCGCAGCACTCAACGATATTTTGCACGAGAACTTGCCGAATATC
ATCTCGGATGGGGGCATTTTGCAGTCCTTATGGCAGTTTATGAAATGGACGGGCCGAGTCAGGATAGCATCGCATTGTCC
CGGGGATTCGACAAGACAATGGTGGCAAAAACCGTGATCCGCCTTGAAGAAGAAGGTTTGATTACACGTATTACGGATCC
GAATGATCGGCGAAGTAAGAAATTACACCTTACCGATAAAGGAAAACGCATTCTTCCCAACCTCTTGCAAATTGGCCTTG
AGCTGAATACGTCAATGTTTGCGGACTTCGATGAAACTGCGTCATCTCAATCTCTCAAGACGCTTAGAAAGATCGCGCTG
AATGTGTCTAAATTGTAG

Upstream 100 bases:

>100_bases
GAACCGCATCCTGATAGGGGTACGAAATCTCTCTATCAGATCGCGCCCATAACAGTTGATTAATCAACTAATAATGTAAT
CTCCATAATACTATAAATAG

Downstream 100 bases:

>100_bases
GCCTTCATCATCCGCACCATACCCGCTCAAGGACGGAACACTATGGTTAAGCGAGATCATGGCGACAAATCCGACAAATG
CTTGTGAAGGAATTAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator TrmB; MarR-Family Transcriptional Regulator; Marr-Family Transcriptional Regulator

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MINQLILRARNTMVKDDSETTTQWIQEIEMPAALISYIYRSTQRYFARELAEYHLGWGHFAVLMAVYEMDGPSQDSIALS
RGFDKTMVAKTVIRLEEEGLITRITDPNDRRSKKLHLTDKGKRILPNLLQIGLELNTSMFADFDETASSQSLKTLRKIAL
NVSKL

Sequences:

>Translated_165_residues
MINQLILRARNTMVKDDSETTTQWIQEIEMPAALISYIYRSTQRYFARELAEYHLGWGHFAVLMAVYEMDGPSQDSIALS
RGFDKTMVAKTVIRLEEEGLITRITDPNDRRSKKLHLTDKGKRILPNLLQIGLELNTSMFADFDETASSQSLKTLRKIAL
NVSKL
>Mature_165_residues
MINQLILRARNTMVKDDSETTTQWIQEIEMPAALISYIYRSTQRYFARELAEYHLGWGHFAVLMAVYEMDGPSQDSIALS
RGFDKTMVAKTVIRLEEEGLITRITDPNDRRSKKLHLTDKGKRILPNLLQIGLELNTSMFADFDETASSQSLKTLRKIAL
NVSKL

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18910; Mature: 18910

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQLILRARNTMVKDDSETTTQWIQEIEMPAALISYIYRSTQRYFARELAEYHLGWGHF
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVLMAVYEMDGPSQDSIALSRGFDKTMVAKTVIRLEEEGLITRITDPNDRRSKKLHLTDK
HHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCC
GKRILPNLLQIGLELNTSMFADFDETASSQSLKTLRKIALNVSKL
CHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINQLILRARNTMVKDDSETTTQWIQEIEMPAALISYIYRSTQRYFARELAEYHLGWGHF
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVLMAVYEMDGPSQDSIALSRGFDKTMVAKTVIRLEEEGLITRITDPNDRRSKKLHLTDK
HHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCC
GKRILPNLLQIGLELNTSMFADFDETASSQSLKTLRKIALNVSKL
CHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA