Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485155

Identifier: 124485155

GI number: 124485155

Start: 310141

End: 310641

Strand: Reverse

Name: 124485155

Synonym: Mlab_0328

Alternate gene names: NA

Gene position: 310641-310141 (Counterclockwise)

Preceding gene: 124485158

Following gene: 124485154

Centisome position: 17.21

GC content: 53.69

Gene sequence:

>501_bases
ATGTGGCGGAGAATACTCGAACAATTTCAGGACTCGCCCTCGCAGCAGAGAGTCGTCCGTTTTCTTCTTGAAAACGGTTT
CGGCGTATCCGCCGAAGGGAAAGCAGTAGTAAACGGCATAGAAATTTCCGCATCCGCGCTCGCACGGGTGATTAAAGTCG
ACCGACGGGTCGTAGACTCCACCCTGCGCAGAATCTGCGAGATCGATGAACTGCAGTCTCTTTTTTCCCGTCTCCGGGTC
ACCCCGGACCTCACAGACGTCGCCAAAAATCTCGGCCTCTCGGTAATCACTATCCTTCCAAATAACGCCGGCGACAAAAA
CATCGTCGCCTCGGCAGTCGATGTCCTCGCATCCTACGATCTTCCTCTCAGACAGATCTTCGTCACGGATCCATATGTGG
TCGAAACACCGCGCCTTGTCATCATCATCGACGGAGTGATTCCGGCAGAAGCCATCCAGAAACTCCGCAATCTCCCGACG
GTCAGATCACTCATCCTGTAA

Upstream 100 bases:

>100_bases
AGTAAATAAATCTGCTGGATTTACACAGAGCTCTTGGACATCACTGTTCAAAAAACAAGGCAAGCGTATTTATGTGTTCC
GTGATAGACACAAAGATACA

Downstream 100 bases:

>100_bases
CTATGTGAGTTTATCTGGTTCGTGAACTTCGACATCTACATCTTTCAGTTCACTTTTTTCTCTCTTCCCCGCTTTTCAGA
AACGATGACACACTCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDSTLRRICEIDELQSLFSRLRV
TPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYDLPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPT
VRSLIL

Sequences:

>Translated_166_residues
MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDSTLRRICEIDELQSLFSRLRV
TPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYDLPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPT
VRSLIL
>Mature_166_residues
MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDSTLRRICEIDELQSLFSRLRV
TPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYDLPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPT
VRSLIL

Specific function: Unknown

COG id: COG2150

COG function: function code R; Predicted regulator of amino acid metabolism, contains ACT domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18417; Mature: 18417

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDS
CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
TLRRICEIDELQSLFSRLRVTPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
LPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPTVRSLIL
CCHHEEEECCCEEEECCEEEEEECCCCCHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDS
CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
TLRRICEIDELQSLFSRLRVTPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
LPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPTVRSLIL
CCHHEEEECCCEEEECCEEEEEECCCCCHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA