| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485155
Identifier: 124485155
GI number: 124485155
Start: 310141
End: 310641
Strand: Reverse
Name: 124485155
Synonym: Mlab_0328
Alternate gene names: NA
Gene position: 310641-310141 (Counterclockwise)
Preceding gene: 124485158
Following gene: 124485154
Centisome position: 17.21
GC content: 53.69
Gene sequence:
>501_bases ATGTGGCGGAGAATACTCGAACAATTTCAGGACTCGCCCTCGCAGCAGAGAGTCGTCCGTTTTCTTCTTGAAAACGGTTT CGGCGTATCCGCCGAAGGGAAAGCAGTAGTAAACGGCATAGAAATTTCCGCATCCGCGCTCGCACGGGTGATTAAAGTCG ACCGACGGGTCGTAGACTCCACCCTGCGCAGAATCTGCGAGATCGATGAACTGCAGTCTCTTTTTTCCCGTCTCCGGGTC ACCCCGGACCTCACAGACGTCGCCAAAAATCTCGGCCTCTCGGTAATCACTATCCTTCCAAATAACGCCGGCGACAAAAA CATCGTCGCCTCGGCAGTCGATGTCCTCGCATCCTACGATCTTCCTCTCAGACAGATCTTCGTCACGGATCCATATGTGG TCGAAACACCGCGCCTTGTCATCATCATCGACGGAGTGATTCCGGCAGAAGCCATCCAGAAACTCCGCAATCTCCCGACG GTCAGATCACTCATCCTGTAA
Upstream 100 bases:
>100_bases AGTAAATAAATCTGCTGGATTTACACAGAGCTCTTGGACATCACTGTTCAAAAAACAAGGCAAGCGTATTTATGTGTTCC GTGATAGACACAAAGATACA
Downstream 100 bases:
>100_bases CTATGTGAGTTTATCTGGTTCGTGAACTTCGACATCTACATCTTTCAGTTCACTTTTTTCTCTCTTCCCCGCTTTTCAGA AACGATGACACACTCATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDSTLRRICEIDELQSLFSRLRV TPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYDLPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPT VRSLIL
Sequences:
>Translated_166_residues MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDSTLRRICEIDELQSLFSRLRV TPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYDLPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPT VRSLIL >Mature_166_residues MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDSTLRRICEIDELQSLFSRLRV TPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYDLPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPT VRSLIL
Specific function: Unknown
COG id: COG2150
COG function: function code R; Predicted regulator of amino acid metabolism, contains ACT domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18417; Mature: 18417
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDS CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH TLRRICEIDELQSLFSRLRVTPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCC LPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPTVRSLIL CCHHEEEECCCEEEECCEEEEEECCCCCHHHHHHHHCCHHHHHHCC >Mature Secondary Structure MWRRILEQFQDSPSQQRVVRFLLENGFGVSAEGKAVVNGIEISASALARVIKVDRRVVDS CHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH TLRRICEIDELQSLFSRLRVTPDLTDVAKNLGLSVITILPNNAGDKNIVASAVDVLASYD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCC LPLRQIFVTDPYVVETPRLVIIIDGVIPAEAIQKLRNLPTVRSLIL CCHHEEEECCCEEEECCEEEEEECCCCCHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA