| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485140
Identifier: 124485140
GI number: 124485140
Start: 298148
End: 298396
Strand: Reverse
Name: 124485140
Synonym: Mlab_0313
Alternate gene names: NA
Gene position: 298396-298148 (Counterclockwise)
Preceding gene: 124485141
Following gene: 124485134
Centisome position: 16.53
GC content: 44.18
Gene sequence:
>249_bases ATGCATAGTATCAAACATCGATCAATGAAGTTCATCGCAAATCTTAGCACATGGAAGAAAAGATGTCTGTTTTTTGCAGG TGGATTTTTCATTGCATTTCCCGGCGCAGTATTTATGGCGGCACTGGGGATGTACCCGGCACTTTTCAGCACACCGGATA TTTTGCAGATTCCGGCAGTCGTCGTCGGGTTAGGATTATTTCTCGCAGGAATGGCCTCCATGTTCCATGCATTTATGCTC AAAGAATAA
Upstream 100 bases:
>100_bases CAAAGTCCTGCATCTGACGAAAACCTACAGATAATTTTTCTTATTTTTCCCACCTCAATCTTTAGCCAGAGTCGAGAGCT GAAAATAATTATATGAGGAG
Downstream 100 bases:
>100_bases CGTGAACAGAGACCGATTTTAACGAAGAACATTACGGGAATAGGACTTACGCGGTGTGGTTGTGACCCCAATTCGGGAAG GGTACGGCTGGGTTTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MHSIKHRSMKFIANLSTWKKRCLFFAGGFFIAFPGAVFMAALGMYPALFSTPDILQIPAVVVGLGLFLAGMASMFHAFML KE
Sequences:
>Translated_82_residues MHSIKHRSMKFIANLSTWKKRCLFFAGGFFIAFPGAVFMAALGMYPALFSTPDILQIPAVVVGLGLFLAGMASMFHAFML KE >Mature_82_residues MHSIKHRSMKFIANLSTWKKRCLFFAGGFFIAFPGAVFMAALGMYPALFSTPDILQIPAVVVGLGLFLAGMASMFHAFML KE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9047; Mature: 9047
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSIKHRSMKFIANLSTWKKRCLFFAGGFFIAFPGAVFMAALGMYPALFSTPDILQIPAV CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VVGLGLFLAGMASMFHAFMLKE HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHSIKHRSMKFIANLSTWKKRCLFFAGGFFIAFPGAVFMAALGMYPALFSTPDILQIPAV CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VVGLGLFLAGMASMFHAFMLKE HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA