| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485133
Identifier: 124485133
GI number: 124485133
Start: 291722
End: 293449
Strand: Reverse
Name: 124485133
Synonym: Mlab_0306
Alternate gene names: NA
Gene position: 293449-291722 (Counterclockwise)
Preceding gene: 124485134
Following gene: 124485132
Centisome position: 16.26
GC content: 56.19
Gene sequence:
>1728_bases ATGAATATTGATTCGACGATTCCAATCAGAGAGGGGACCCTCTCCCCTCCGGCGGAAGAACTCGACCTCTCGACCTTCTT TCCGCCAACGAACAGCCATTCGAATATCACGCTTACCTTCGATCCTGACGAACCCGAAGGTAAACACTGCCCGGTCTCGC CGGTCCCGGTTCCCCGGGAACTGCCGGCAAACACGGCAGCAGCCGTAAAAAGCGCCGGAAGGGCTCTCCGGTATTATAAT ACTGCGAACCGTTCCTTTGTCGGCATCTATGCCGGCAGACTGTGCGAAATCACGGACGGAGTGATCGCACCTCTCGACCG GGGAAGGCTTCGCATTCTGCTCACAGCGCTTTCCTCCTGGCACAAACCGGGCGATGAATCCAAGACCGAGATCCCGCTTC CCTTCGACCTGCTCGAAAGCGTGCTGAAGGCTTCGGCAAAGGAGCTGGATCGTCTGCCGGAGATCACAGGCGTGCATTGC GGCGCAATGCTGAAGCAAAACGGCGAAATCGTTTCCGCGAAAGGCTTTGAGAAAGAGACCGGCTGGTATTTCTGCCGGGA TCTGGAGATCGAAGAGGCTCCAGACATTCCCAGTGAAGACGATCTTTCGCGTGCACGGGAAGATATCTATTCGGTGTATC GCGAGTTTTTGTTCAAAGACCGGGCGGATTATGAAAATAATCTGGCGGCACTGTTTTCCGCGATGCTCCGACCAAGTCTT CCCGGTCCGTTTCCGATCCATGCCGTGCGGAAAAACAGTCCGCGGACCGGGGGGAGTTTTCTGCAGCAGATCAACGGGAT TGCGGCGTTCGGGGCCGAGATGCCGGTCTACCCTGCCCCGTCCCGCACGGAAGAGATGGAGAAGCTGCATAAGACGATCG TTAAGGAGAGTCCGCTGTATGCGGTCATCGATAATGTCCCGCCGGGTGCGGATTTTGTGTCGGAGTTTCTTCTTTCGGCG ACGTCGGGAAACGGTAGAGCGTCGTTTCGCGACTTTGGAACGCTGAATCAGGTGGAACGGGCCGTGACTACGCAGTTCTG CGTGAACGGGAACCATCTGAAGATCTCGGCGGATGTCTGCGGACGCGTGATCGCGACAAATATTATGGCGCAGAAACCCT GGCAGGATCTGAGGTTTTCCCGGAAAAAGGATGAGCTGATCGCTTATGCCCAGGAGATGCACCCAAAAATCGTGCGGGCA TTCGCGGTGTTTCTGAAAAACTGGATCGCGAAGGGCCGGCCGGCTCCTCCGCCGTGTCCGGGGAATCTGGCGGAGTATCC GCAGTGGTATTCTGTTATCGCCGGGTCGCTGTATGCAGCAGGGTTTTCGAGGGTCCTTTCGAATCTGGATGAGATCCAGA CTGAGGAGAATGAGGCGGAGACGGAAGGATGCGAGCTTTTGTCCCGGCTGTTTGCCGCGTTCGGGAGCGAAGTGTTTACG GCCGCCGGGCTGAAGACTGCGATGATCCGCGAAGGAGAGCAGCGTAAGGAGCATCAGGTTTCTGCGCAGACGATTCTGGA TTATGCACCGGATCGTCTGGTGAATGCAGCGGTCGCCGGAACGCTGACGGATGTTATGGCGGGGAGATGGATTTCGCAGA TTGCGGATCAGAAGTTTGCGGGATATGACCGGTTTCTGATGAAGAGCCGGACACCTCTGGGTGTTCGATATAAACTCGTT CCTGTGGAAAAACAGACATGCCTTACGGATCCTCAGAAGGATATGTAG
Upstream 100 bases:
>100_bases GTATTCATAACATATATCTGATTACATTCTTCCGGCCTGAAACAGAACACTCAGCATTCTGAGAAACAACCCTCCCGCCG GTATGGATACGAGCTAATTT
Downstream 100 bases:
>100_bases GTAATGTAGGAGGAATGCAGGATGAAAATCCTCAACCCTACATAGATTTACGGTAGGATTTTTCTTTGTTTTGGATTTGG AGGAGTATTTGTATTTTTAT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MNIDSTIPIREGTLSPPAEELDLSTFFPPTNSHSNITLTFDPDEPEGKHCPVSPVPVPRELPANTAAAVKSAGRALRYYN TANRSFVGIYAGRLCEITDGVIAPLDRGRLRILLTALSSWHKPGDESKTEIPLPFDLLESVLKASAKELDRLPEITGVHC GAMLKQNGEIVSAKGFEKETGWYFCRDLEIEEAPDIPSEDDLSRAREDIYSVYREFLFKDRADYENNLAALFSAMLRPSL PGPFPIHAVRKNSPRTGGSFLQQINGIAAFGAEMPVYPAPSRTEEMEKLHKTIVKESPLYAVIDNVPPGADFVSEFLLSA TSGNGRASFRDFGTLNQVERAVTTQFCVNGNHLKISADVCGRVIATNIMAQKPWQDLRFSRKKDELIAYAQEMHPKIVRA FAVFLKNWIAKGRPAPPPCPGNLAEYPQWYSVIAGSLYAAGFSRVLSNLDEIQTEENEAETEGCELLSRLFAAFGSEVFT AAGLKTAMIREGEQRKEHQVSAQTILDYAPDRLVNAAVAGTLTDVMAGRWISQIADQKFAGYDRFLMKSRTPLGVRYKLV PVEKQTCLTDPQKDM
Sequences:
>Translated_575_residues MNIDSTIPIREGTLSPPAEELDLSTFFPPTNSHSNITLTFDPDEPEGKHCPVSPVPVPRELPANTAAAVKSAGRALRYYN TANRSFVGIYAGRLCEITDGVIAPLDRGRLRILLTALSSWHKPGDESKTEIPLPFDLLESVLKASAKELDRLPEITGVHC GAMLKQNGEIVSAKGFEKETGWYFCRDLEIEEAPDIPSEDDLSRAREDIYSVYREFLFKDRADYENNLAALFSAMLRPSL PGPFPIHAVRKNSPRTGGSFLQQINGIAAFGAEMPVYPAPSRTEEMEKLHKTIVKESPLYAVIDNVPPGADFVSEFLLSA TSGNGRASFRDFGTLNQVERAVTTQFCVNGNHLKISADVCGRVIATNIMAQKPWQDLRFSRKKDELIAYAQEMHPKIVRA FAVFLKNWIAKGRPAPPPCPGNLAEYPQWYSVIAGSLYAAGFSRVLSNLDEIQTEENEAETEGCELLSRLFAAFGSEVFT AAGLKTAMIREGEQRKEHQVSAQTILDYAPDRLVNAAVAGTLTDVMAGRWISQIADQKFAGYDRFLMKSRTPLGVRYKLV PVEKQTCLTDPQKDM >Mature_575_residues MNIDSTIPIREGTLSPPAEELDLSTFFPPTNSHSNITLTFDPDEPEGKHCPVSPVPVPRELPANTAAAVKSAGRALRYYN TANRSFVGIYAGRLCEITDGVIAPLDRGRLRILLTALSSWHKPGDESKTEIPLPFDLLESVLKASAKELDRLPEITGVHC GAMLKQNGEIVSAKGFEKETGWYFCRDLEIEEAPDIPSEDDLSRAREDIYSVYREFLFKDRADYENNLAALFSAMLRPSL PGPFPIHAVRKNSPRTGGSFLQQINGIAAFGAEMPVYPAPSRTEEMEKLHKTIVKESPLYAVIDNVPPGADFVSEFLLSA TSGNGRASFRDFGTLNQVERAVTTQFCVNGNHLKISADVCGRVIATNIMAQKPWQDLRFSRKKDELIAYAQEMHPKIVRA FAVFLKNWIAKGRPAPPPCPGNLAEYPQWYSVIAGSLYAAGFSRVLSNLDEIQTEENEAETEGCELLSRLFAAFGSEVFT AAGLKTAMIREGEQRKEHQVSAQTILDYAPDRLVNAAVAGTLTDVMAGRWISQIADQKFAGYDRFLMKSRTPLGVRYKLV PVEKQTCLTDPQKDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63609; Mature: 63609
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDSTIPIREGTLSPPAEELDLSTFFPPTNSHSNITLTFDPDEPEGKHCPVSPVPVPRE CCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC LPANTAAAVKSAGRALRYYNTANRSFVGIYAGRLCEITDGVIAPLDRGRLRILLTALSSW CCCCHHHHHHHHHHHEEEEECCCCCEEEEHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHH HKPGDESKTEIPLPFDLLESVLKASAKELDRLPEITGVHCGAMLKQNGEIVSAKGFEKET CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCC GWYFCRDLEIEEAPDIPSEDDLSRAREDIYSVYREFLFKDRADYENNLAALFSAMLRPSL CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC PGPFPIHAVRKNSPRTGGSFLQQINGIAAFGAEMPVYPAPSRTEEMEKLHKTIVKESPLY CCCCCEEHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE AVIDNVPPGADFVSEFLLSATSGNGRASFRDFGTLNQVERAVTTQFCVNGNHLKISADVC EEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHEECCCEEEEEHHHH GRVIATNIMAQKPWQDLRFSRKKDELIAYAQEMHPKIVRAFAVFLKNWIAKGRPAPPPCP HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GNLAEYPQWYSVIAGSLYAAGFSRVLSNLDEIQTEENEAETEGCELLSRLFAAFGSEVFT CCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH AAGLKTAMIREGEQRKEHQVSAQTILDYAPDRLVNAAVAGTLTDVMAGRWISQIADQKFA HHCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYDRFLMKSRTPLGVRYKLVPVEKQTCLTDPQKDM CHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCCCC >Mature Secondary Structure MNIDSTIPIREGTLSPPAEELDLSTFFPPTNSHSNITLTFDPDEPEGKHCPVSPVPVPRE CCCCCCCCCCCCCCCCCHHHCCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC LPANTAAAVKSAGRALRYYNTANRSFVGIYAGRLCEITDGVIAPLDRGRLRILLTALSSW CCCCHHHHHHHHHHHEEEEECCCCCEEEEHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHH HKPGDESKTEIPLPFDLLESVLKASAKELDRLPEITGVHCGAMLKQNGEIVSAKGFEKET CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCC GWYFCRDLEIEEAPDIPSEDDLSRAREDIYSVYREFLFKDRADYENNLAALFSAMLRPSL CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC PGPFPIHAVRKNSPRTGGSFLQQINGIAAFGAEMPVYPAPSRTEEMEKLHKTIVKESPLY CCCCCEEHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE AVIDNVPPGADFVSEFLLSATSGNGRASFRDFGTLNQVERAVTTQFCVNGNHLKISADVC EEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHEECCCEEEEEHHHH GRVIATNIMAQKPWQDLRFSRKKDELIAYAQEMHPKIVRAFAVFLKNWIAKGRPAPPPCP HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GNLAEYPQWYSVIAGSLYAAGFSRVLSNLDEIQTEENEAETEGCELLSRLFAAFGSEVFT CCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHH AAGLKTAMIREGEQRKEHQVSAQTILDYAPDRLVNAAVAGTLTDVMAGRWISQIADQKFA HHCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYDRFLMKSRTPLGVRYKLVPVEKQTCLTDPQKDM CHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA