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The map label for this gene is 124485051

Identifier: 124485051

GI number: 124485051

Start: 210732

End: 211238

Strand: Reverse

Name: 124485051

Synonym: Mlab_0224

Alternate gene names: NA

Gene position: 211238-210732 (Counterclockwise)

Preceding gene: 124485053

Following gene: 124485050

Centisome position: 11.7

GC content: 47.73

Gene sequence:

>507_bases
ATGGGCATTCTGATCTCACTCATTGCATACCGCGACAACTCCTGTGATCCGAAAAAATGTACTGTCAAAAAACTGCAAAA
ATTCGGGATGATCAATGTCGTTAATAAAATCACTCATGTGCCTAAAACCACGCTCCTCCTTGACCCCACCGCCGAATACG
TAATATCACCCCCGGATAGAAAATGGGTCACATCCATCACGGCACTGGACTGCTCATGGATCGTGCTTGATACTACCAAC
CTCAATCCCTGGAAAAACCGGCGTGCCCTGCCGTTTCTCGTTGCCGCAAACCCGGTGAATTTTGGAAAACCCTTCACGCT
TACCTCGGTCGAGGCAATAGCGGCAGCTCTCGTGATTCTCGGAGAGCAGGAGCAGGCCGTACGTATTCTGGAAAAATTCA
ACTGGGGGCTGAATTTCCTCAAACTCAACGAAGAGCCACTGGAAGAGTATGCCAACGCAAAAAACAGCGAAGAAGTTCTT
AAAATACAGAGCGAATATATCGGATAA

Upstream 100 bases:

>100_bases
TTGTAATGCCGTCAGCACGAAGATTTTCATGCAAAACACAGGGTGAAGCGAGGATAAACATGAGTATACTATTTGTATCA
GGAAGACATAAATAAAGATC

Downstream 100 bases:

>100_bases
TCACCCTCAAACCAATATTTATACCTTAACAAAACAGATGAATAGCTACTATGGGAGAGGTGCTCATTTTAATCGGCTGT
CCCCAGATCCCTGTACAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGILISLIAYRDNSCDPKKCTVKKLQKFGMINVVNKITHVPKTTLLLDPTAEYVISPPDRKWVTSITALDCSWIVLDTTN
LNPWKNRRALPFLVAANPVNFGKPFTLTSVEAIAAALVILGEQEQAVRILEKFNWGLNFLKLNEEPLEEYANAKNSEEVL
KIQSEYIG

Sequences:

>Translated_168_residues
MGILISLIAYRDNSCDPKKCTVKKLQKFGMINVVNKITHVPKTTLLLDPTAEYVISPPDRKWVTSITALDCSWIVLDTTN
LNPWKNRRALPFLVAANPVNFGKPFTLTSVEAIAAALVILGEQEQAVRILEKFNWGLNFLKLNEEPLEEYANAKNSEEVL
KIQSEYIG
>Mature_167_residues
GILISLIAYRDNSCDPKKCTVKKLQKFGMINVVNKITHVPKTTLLLDPTAEYVISPPDRKWVTSITALDCSWIVLDTTNL
NPWKNRRALPFLVAANPVNFGKPFTLTSVEAIAAALVILGEQEQAVRILEKFNWGLNFLKLNEEPLEEYANAKNSEEVLK
IQSEYIG

Specific function: Unknown

COG id: COG2042

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0293 family [H]

Homologues:

Organism=Homo sapiens, GI47777330, Length=159, Percent_Identity=40.251572327044, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI25148466, Length=167, Percent_Identity=42.5149700598802, Blast_Score=131, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6324579, Length=171, Percent_Identity=34.5029239766082, Blast_Score=110, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24647066, Length=159, Percent_Identity=45.9119496855346, Blast_Score=136, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007177
- InterPro:   IPR007209
- InterPro:   IPR022968
- ProDom:   PD016638 [H]

Pfam domain/function: PF04034 DUF367; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 18888; Mature: 18757

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILISLIAYRDNSCDPKKCTVKKLQKFGMINVVNKITHVPKTTLLLDPTAEYVISPPDR
CCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCC
KWVTSITALDCSWIVLDTTNLNPWKNRRALPFLVAANPVNFGKPFTLTSVEAIAAALVIL
HHHHEEEEECEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHC
GEQEQAVRILEKFNWGLNFLKLNEEPLEEYANAKNSEEVLKIQSEYIG
CCHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GILISLIAYRDNSCDPKKCTVKKLQKFGMINVVNKITHVPKTTLLLDPTAEYVISPPDR
CCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCC
KWVTSITALDCSWIVLDTTNLNPWKNRRALPFLVAANPVNFGKPFTLTSVEAIAAALVIL
HHHHEEEEECEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHC
GEQEQAVRILEKFNWGLNFLKLNEEPLEEYANAKNSEEVLKIQSEYIG
CCHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA