| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is apt1 [H]
Identifier: 124485046
GI number: 124485046
Start: 208263
End: 208826
Strand: Reverse
Name: apt1 [H]
Synonym: Mlab_0219
Alternate gene names: 124485046
Gene position: 208826-208263 (Counterclockwise)
Preceding gene: 124485048
Following gene: 124485045
Centisome position: 11.57
GC content: 49.47
Gene sequence:
>564_bases ATGCTTGAAATCCTCAAAGAATCCCTTCTGACATGTCCTATGGTCAAACGGGAAAAAGACGGGGTGGTCTATAATTATTT CATCAATCCTCTGACAGACGGCATCCCGGAAGTCACGGCGGAACTTCTGCGTGATGTGACGGCGGCGATGATGGTGTCCC TCGATCTGAAAAACGTCGATAAGATCGTGGTATCCGAGGCAATGGGAATCCACATAGGGACTGCGCTAACTCTTGCGACC GGCATTCCCTTCGTTGTTATCAGAAAACGGGAATACCGTCTGCCGGGCGAAGTCGTCATCGGTCAGGAGACCGGATACTC CAAAGGAACCCTCTATATGAACTGTGTGCATAAAGGCGACAGAGTCGTGATCATTGACGATGTCATCAGTACCGGCGGCA CGATCAAAGGGATCCTCCCGGCACTGAAAATTGCCGGGGCGGAACTTGTGGATATTCTCTTTGTTGTGAACAGAGGATCT CCAGATATCGGCATTCCCTACAAAACACTTGTCACGATCGATGTTGACGAAAACGGTGTGAAGATCATTGATTCAGCTTT CTGA
Upstream 100 bases:
>100_bases GCCGGAATGTATTTCATTGAAAGAGCATTAGCGGCACGAACAGAAAAACCTTGTCTCGCCGGCGTTAGACGTATTTGTAA GAAAAGTCAACATATGAGGC
Downstream 100 bases:
>100_bases AGTTATTACCCAGCTAAAAAGCCGAAATGCAAAAAGGATCGCAGTTCAGCTGCCCGAAGGGCTGAAACGACAAGCAGCGG AGATCTCCAGAGCTCTAAAA
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT 1 [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLEILKESLLTCPMVKREKDGVVYNYFINPLTDGIPEVTAELLRDVTAAMMVSLDLKNVDKIVVSEAMGIHIGTALTLAT GIPFVVIRKREYRLPGEVVIGQETGYSKGTLYMNCVHKGDRVVIIDDVISTGGTIKGILPALKIAGAELVDILFVVNRGS PDIGIPYKTLVTIDVDENGVKIIDSAF
Sequences:
>Translated_187_residues MLEILKESLLTCPMVKREKDGVVYNYFINPLTDGIPEVTAELLRDVTAAMMVSLDLKNVDKIVVSEAMGIHIGTALTLAT GIPFVVIRKREYRLPGEVVIGQETGYSKGTLYMNCVHKGDRVVIIDDVISTGGTIKGILPALKIAGAELVDILFVVNRGS PDIGIPYKTLVTIDVDENGVKIIDSAF >Mature_187_residues MLEILKESLLTCPMVKREKDGVVYNYFINPLTDGIPEVTAELLRDVTAAMMVSLDLKNVDKIVVSEAMGIHIGTALTLAT GIPFVVIRKREYRLPGEVVIGQETGYSKGTLYMNCVHKGDRVVIIDDVISTGGTIKGILPALKIAGAELVDILFVVNRGS PDIGIPYKTLVTIDVDENGVKIIDSAF
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1786675, Length=132, Percent_Identity=32.5757575757576, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 20289; Mature: 20289
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEILKESLLTCPMVKREKDGVVYNYFINPLTDGIPEVTAELLRDVTAAMMVSLDLKNVD CHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH KIVVSEAMGIHIGTALTLATGIPFVVIRKREYRLPGEVVIGQETGYSKGTLYMNCVHKGD HHHHHHHCCEEHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCC RVVIIDDVISTGGTIKGILPALKIAGAELVDILFVVNRGSPDIGIPYKTLVTIDVDENGV EEEEEECHHCCCCCHHHHHHHHHHCCHHHEEEEEEEECCCCCCCCCEEEEEEEEECCCCE KIIDSAF EEEECCC >Mature Secondary Structure MLEILKESLLTCPMVKREKDGVVYNYFINPLTDGIPEVTAELLRDVTAAMMVSLDLKNVD CHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH KIVVSEAMGIHIGTALTLATGIPFVVIRKREYRLPGEVVIGQETGYSKGTLYMNCVHKGD HHHHHHHCCEEHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCC RVVIIDDVISTGGTIKGILPALKIAGAELVDILFVVNRGSPDIGIPYKTLVTIDVDENGV EEEEEECHHCCCCCHHHHHHHHHHCCHHHEEEEEEEECCCCCCCCCEEEEEEEEECCCCE KIIDSAF EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA