| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is ftr [H]
Identifier: 124485042
GI number: 124485042
Start: 204545
End: 205447
Strand: Reverse
Name: ftr [H]
Synonym: Mlab_0215
Alternate gene names: 124485042
Gene position: 205447-204545 (Counterclockwise)
Preceding gene: 124485043
Following gene: 124485039
Centisome position: 11.38
GC content: 52.05
Gene sequence:
>903_bases ATGCCCAATTCATATAATATGGAATTCAACGGTGTAATTCTTGAAGACACATATGCAGAAGGCTTCCCGGTGTGGGCTGC CCGTGTAATCATCACTGCAGTAACGAAAGAGTGGGCATACAAAGCAGCAACCGAAGCAACCGGTTTTGCAACCTCAACCA TCGGCTGCCCCTGCGAAGCAGGAATCGAACGGTTCGTTCCGGCATCGGAAACCCCCGACAACCGCCCGGGATATGCAATC ATGCTCTGCTGTGGTAAGAAGGCACTTAAAGAGCAGGTTCTTGAGCGCATTGCCGAGTGTGTTTTAACTGCACCCACAAC CGCCGTTTTCAATGGAAAAGCAGGCTCTGAAGAGATCATCCCGGTAAAACTCCACTTCTTCGGCGATGGATACGAATCCA AAGTCGTCGTTGGCGGAATCAACTGCTGGTCCATCCCAATCATGGGCGGCAACTTTGTTGTAGAAGAAGAAGTCGGAGCA ATTAAAGGCGTTGCCGGCGGTAACTTCCTGATTATGGGAGACTCTCAGATGTCAGCACTCATCGCAGCAGAAGCAGCAGT CGATGCAATCAGCTGTGTTCCCGGAACCATCACCCCGTTCCCCGGCGGAGTTGTATCCTCAGGATCCAAAGTCGGTTCCC TGAAATACAAATTCATGGGTGCATCCACCAACGAAAAGTTCTGCCCCACGATCCGCGAGAAGGTCCCGGAAACCGAGATC CCCGAAGGCGTCAAGGCAGTTTACGAGATCGTCATCGACGGTGTCTCCGAAGCAGCAGTCAAGGAGGCTATGAAAGTCGG TGTTCAGGCAGCATGCAGAGTTCCAGGTGTCGTAAAGATCACCGCAGGAAACTACGGCGGAAACCTCGGTCCCTTCAAGT TCCACTTGAAGGACTGCATCTAA
Upstream 100 bases:
>100_bases GTTGGAATCCTCAACATCCCCTATTTTTTTAGAACAACGGCATATCTTGCTCCATTATCCGGCTGCAGCGTGTGTCAACC CGCAAACGCTATTTACCACC
Downstream 100 bases:
>100_bases CTTTTTTTTACGTATGTTCTATTTCAGCTGACGCAACTTCTTCAGAACCTATGGTATTCTCCAAAGAACACTGAAGAGTT GTCTTTTAATTGATTTGCAA
Product: formylmethanofuran--tetrahydromethanopterin formyltransferase
Products: NA
Alternate protein names: H4MPT formyltransferase [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPNSYNMEFNGVILEDTYAEGFPVWAARVIITAVTKEWAYKAATEATGFATSTIGCPCEAGIERFVPASETPDNRPGYAI MLCCGKKALKEQVLERIAECVLTAPTTAVFNGKAGSEEIIPVKLHFFGDGYESKVVVGGINCWSIPIMGGNFVVEEEVGA IKGVAGGNFLIMGDSQMSALIAAEAAVDAISCVPGTITPFPGGVVSSGSKVGSLKYKFMGASTNEKFCPTIREKVPETEI PEGVKAVYEIVIDGVSEAAVKEAMKVGVQAACRVPGVVKITAGNYGGNLGPFKFHLKDCI
Sequences:
>Translated_300_residues MPNSYNMEFNGVILEDTYAEGFPVWAARVIITAVTKEWAYKAATEATGFATSTIGCPCEAGIERFVPASETPDNRPGYAI MLCCGKKALKEQVLERIAECVLTAPTTAVFNGKAGSEEIIPVKLHFFGDGYESKVVVGGINCWSIPIMGGNFVVEEEVGA IKGVAGGNFLIMGDSQMSALIAAEAAVDAISCVPGTITPFPGGVVSSGSKVGSLKYKFMGASTNEKFCPTIREKVPETEI PEGVKAVYEIVIDGVSEAAVKEAMKVGVQAACRVPGVVKITAGNYGGNLGPFKFHLKDCI >Mature_299_residues PNSYNMEFNGVILEDTYAEGFPVWAARVIITAVTKEWAYKAATEATGFATSTIGCPCEAGIERFVPASETPDNRPGYAIM LCCGKKALKEQVLERIAECVLTAPTTAVFNGKAGSEEIIPVKLHFFGDGYESKVVVGGINCWSIPIMGGNFVVEEEVGAI KGVAGGNFLIMGDSQMSALIAAEAAVDAISCVPGTITPFPGGVVSSGSKVGSLKYKFMGASTNEKFCPTIREKVPETEIP EGVKAVYEIVIDGVSEAAVKEAMKVGVQAACRVPGVVKITAGNYGGNLGPFKFHLKDCI
Specific function: Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5- formyl-H(4)MPT) and methanofuran (MFR) [H]
COG id: COG2037
COG function: function code C; Formylmethanofuran:tetrahydromethanopterin formyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FTR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002770 - InterPro: IPR022667 - InterPro: IPR014053 [H]
Pfam domain/function: PF01913 FTR; PF02741 FTR_C [H]
EC number: =2.3.1.101 [H]
Molecular weight: Translated: 31582; Mature: 31451
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSYNMEFNGVILEDTYAEGFPVWAARVIITAVTKEWAYKAATEATGFATSTIGCPCEA CCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHH GIERFVPASETPDNRPGYAIMLCCGKKALKEQVLERIAECVLTAPTTAVFNGKAGSEEII HHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE PVKLHFFGDGYESKVVVGGINCWSIPIMGGNFVVEEEVGAIKGVAGGNFLIMGDSQMSAL EEEEEEECCCCCCEEEEECCCEEEEEEECCCEEEECCCCCEEECCCCCEEEEECCHHHHH IAAEAAVDAISCVPGTITPFPGGVVSSGSKVGSLKYKFMGASTNEKFCPTIREKVPETEI HHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCC PEGVKAVYEIVIDGVSEAAVKEAMKVGVQAACRVPGVVKITAGNYGGNLGPFKFHLKDCI CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure PNSYNMEFNGVILEDTYAEGFPVWAARVIITAVTKEWAYKAATEATGFATSTIGCPCEA CCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHH GIERFVPASETPDNRPGYAIMLCCGKKALKEQVLERIAECVLTAPTTAVFNGKAGSEEII HHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE PVKLHFFGDGYESKVVVGGINCWSIPIMGGNFVVEEEVGAIKGVAGGNFLIMGDSQMSAL EEEEEEECCCCCCEEEEECCCEEEEEEECCCEEEECCCCCEEECCCCCEEEEECCHHHHH IAAEAAVDAISCVPGTITPFPGGVVSSGSKVGSLKYKFMGASTNEKFCPTIREKVPETEI HHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHCCCCCC PEGVKAVYEIVIDGVSEAAVKEAMKVGVQAACRVPGVVKITAGNYGGNLGPFKFHLKDCI CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]