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The map label for this gene is pdaD [H]

Identifier: 124485030

GI number: 124485030

Start: 192126

End: 192626

Strand: Reverse

Name: pdaD [H]

Synonym: Mlab_0203

Alternate gene names: 124485030

Gene position: 192626-192126 (Counterclockwise)

Preceding gene: 124485032

Following gene: 124485029

Centisome position: 10.67

GC content: 50.1

Gene sequence:

>501_bases
ATGGTAGTTCCCAAAAAAGTATTTTTCACCCGAGGAAAAGGCGTGCATAAAGATCAGCTCGTTTCCTTCGAGATGGCCCT
AAGAAACGCAGGAATCGCCCCATTCAATCTGGTCTACGTATCTTCCATTATGCCGCCGGACGCAGAAATCGTCTCGCGCG
ACGAGGGACTCTCTGCCTTAAGGCCGGGAGAGATCGTGTACTGTGTGATGGCAAAAAACACATCAAACGAACCAAATGAG
ACAATATCGGCAGCTATCGGACTTGCTGTCCCTCAGATTCACGACAAGCAGCACGGGTACCTTTCGGAGCATCACTGTGT
TGGACTCTCGGAAAAACAGTGCGGAGCATATGCCGAAGAACTCGCCAGAACGATGCTGGATACAATCATGCAGAAACAGG
GCGGCAATATTCTGAAAACGAGCAATATCAGTATTGCTGCCGAGACGGATCAAGACGGCAACTGGACAACCGTTGTCGCA
ACGGCGGTCTTCGTCTGTTAA

Upstream 100 bases:

>100_bases
TAGGACATCACCGTATTTTAATCCACTCAAATCAAAGCACATCAAAACACATCCTCTAGCACAACCCTTATGAGTTAGTT
AAAGAGACCAATTAACCAAG

Downstream 100 bases:

>100_bases
ACCTATATCTGAATACAACCAATATTTTTACAACATGTGCGGCATCACTGGCATTACCGATTCTACAGATGTATCGGGAT
CATTGTACTTGGCATTATAT

Product: pyruvoyl-dependent arginine decarboxylase

Products: NA

Alternate protein names: PvlArgDC [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MVVPKKVFFTRGKGVHKDQLVSFEMALRNAGIAPFNLVYVSSIMPPDAEIVSRDEGLSALRPGEIVYCVMAKNTSNEPNE
TISAAIGLAVPQIHDKQHGYLSEHHCVGLSEKQCGAYAEELARTMLDTIMQKQGGNILKTSNISIAAETDQDGNWTTVVA
TAVFVC

Sequences:

>Translated_166_residues
MVVPKKVFFTRGKGVHKDQLVSFEMALRNAGIAPFNLVYVSSIMPPDAEIVSRDEGLSALRPGEIVYCVMAKNTSNEPNE
TISAAIGLAVPQIHDKQHGYLSEHHCVGLSEKQCGAYAEELARTMLDTIMQKQGGNILKTSNISIAAETDQDGNWTTVVA
TAVFVC
>Mature_166_residues
MVVPKKVFFTRGKGVHKDQLVSFEMALRNAGIAPFNLVYVSSIMPPDAEIVSRDEGLSALRPGEIVYCVMAKNTSNEPNE
TISAAIGLAVPQIHDKQHGYLSEHHCVGLSEKQCGAYAEELARTMLDTIMQKQGGNILKTSNISIAAETDQDGNWTTVVA
TAVFVC

Specific function: Unknown

COG id: COG1945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdaD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016104
- InterPro:   IPR016105
- InterPro:   IPR002724
- ProDom:   PD010449 [H]

Pfam domain/function: PF01862 PvlArgDC [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 17995; Mature: 17995

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVPKKVFFTRGKGVHKDQLVSFEMALRNAGIAPFNLVYVSSIMPPDAEIVSRDEGLSAL
CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCCCCC
RPGEIVYCVMAKNTSNEPNETISAAIGLAVPQIHDKQHGYLSEHHCVGLSEKQCGAYAEE
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LARTMLDTIMQKQGGNILKTSNISIAAETDQDGNWTTVVATAVFVC
HHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCEEEHHHHHHHCC
>Mature Secondary Structure
MVVPKKVFFTRGKGVHKDQLVSFEMALRNAGIAPFNLVYVSSIMPPDAEIVSRDEGLSAL
CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCCCCC
RPGEIVYCVMAKNTSNEPNETISAAIGLAVPQIHDKQHGYLSEHHCVGLSEKQCGAYAEE
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LARTMLDTIMQKQGGNILKTSNISIAAETDQDGNWTTVVATAVFVC
HHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA