Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485028

Identifier: 124485028

GI number: 124485028

Start: 188068

End: 190215

Strand: Reverse

Name: 124485028

Synonym: Mlab_0201

Alternate gene names: NA

Gene position: 190215-188068 (Counterclockwise)

Preceding gene: 124485029

Following gene: 124485026

Centisome position: 10.54

GC content: 51.68

Gene sequence:

>2148_bases
ATGGTAGAGCAGACAGGCGAATTCTCCGAAATTCTTACACTTTTACGAGAGAACCCGCGAGGGATGTCCGTCACAGAGAT
CGCCGATGCCACGCACCTGAACCGGAACACCATAGCACGATATATGGATAACCTGCTCGTGTCCGGACGGGTCGAAATGC
GCACCTTCGGAAAAGCCAAAGTCTTTTTCTTATCAAAAAGGGTCCCAGTATCCGCGATGCTCAACCTTTCCTCCGAGATG
GTGCTCCTGATCGATGCCGATCTCAAAGTCATTCAGGCAAATGAGTCATTAGTATCGTTTCTCTCCGCAGAAGCCGATGA
TATCGTTGGAAAATATGTGTACGACAGTGCCTGCAAAACGTTCTGCAACGATGTGCTCACCGACCAGATAAGAGCAGCCC
TTCAGGGAGAGACGGTCAGGAGTGAACTGCGCCTTTTGAAGAACGGGACAGACTGTTATCTTGATCAGCGAATATATCCC
ATGGTCCTTCCCGACGGACGACCCGGCGTAACGGTCGTCTGGGACGATATCACGGAAAATGTAAACTCGGCGGATGCTCT
CGAACAAAGCGAAGCGATGTTTCGGCGTCTCGTTGAAACGATCCATGACGTCATCTGGTCGCTGGATGAAAATTTCTGTA
TCCAGTACATAAGTCCGCAAATTACCAATGTGACCGGATACTCGCCCGAGGAACTTACCGGGCGCAAATTTTCTGAATTT
ATGCCGGCAGGAGCGGCGGCCCGTTTCAACTGGGAACTTGCGTCAGCAGTATCCCGGGAAAACGGATTCATGCTTCCCGA
GTTCCCCTTTATCTGCAAAGATAAACGAAAGATCTACTGCGAGTTTTCCGGATCGCCCGTTCTTCTCGAAGAAGACTCCA
TCTTCCTTGGATACAACGGGGCACTTCGCGACGTGACCGACCGGAGAGATGCGGAGCTCGGGGCAAAACGGTGGAAACGG
TTTTTGGACGGTGTGATGAACAATATCCCTGCGATCATCACCGTAATCGGGATGGAGTCACGGGAATACTATTACGTCAA
CAAATCCGCCGAGAAGTTCCTGCAGAAGTCAAGAGCGGAACTTTCCCAGATGACTTCAAAAGAGATCCTGGCAAAAATCG
GATCGATCCGTTTAACGGAAGCCCATGACACGGTGGCTTTGACCGGCAAAGAGGCACGAGTCTTTGAAGACAGGATCGTG
GTCAACGGGGAGACCAGATACATCTCGGCCCAGGTCATCCCCATGAATCTCTCGGTCGACCGACAGTATCTGCTGACGAT
CGTGAACGACATCACCGAAGAGGATGCAGACCGGCAGCGGCAGATGATGAGCAGGGAACTTGCCTTCATTCTGGAAGGCG
TATCCTCTACCAAAGAGATGTGGGATCCGCTTCTTGATATGCTCCCGAAGATCTCCGGCTTCGAGTCGGTGGCAGTGTAT
CAGTTGAGCATCTTCGATGACTATACGATGTTCAGGTCGAGAAACGGCAGATTCGCCCCTGCGATCCATACCAATTCCAT
GATCCACCGGATCATCAGAAAAGGCGAACCGGTCATCTTCGACAAACACCGGATGAAACTCCTGCCGGAGAACACCGTTT
CTCCGATGGATCAGGCAAAATCACTTGTACTGATGCCGGTCCTTTTCGAAGGAAGGGCAGTTGCCTGCGTGATCCTTGGA
TCGAAAACGGCACTCGCGCCGGACACTGTCCGGAGAACACTTCTTTTATCCACCGCATTCCAGATCAGCACCGTTGCATC
AAGATGTCTGGTCCAGGAAAAACTCCAGCGGGAACGCGACCGGACGAGAAGCTATCTCGATGTGGCCGGCGTTCTGCTTG
TCGCAGTCAACCGTGACGGAAACGTCGAGATGCTCAACAAATACGGTACGAAAATTCTCGGCTACACCGAAGCGGAACTG
ATGGGAAGGAACTGGTTTACGACCGTGATCCCCGAAAAGGCGAGACAGAGAAGAATCGACGGATTCCAAAAACTCATTGC
AGGAAATTTCCACGAAGATGATTACGTGTATGAGGGGGTCGTCCGCTGTAAAGACGGAACGGAAAAGAACCTCAGATGGA
GAAATACCCCGGTTCGCGAAGAGTGCGGGAGTATCTCCGGCATTGTTTCATCCGGAGAAGTAGTGTAG

Upstream 100 bases:

>100_bases
CATATATTTAAACATATCCACCAATGCACGGCATTGATGTTGTGCATCAATGCCACACACGGTGCAAAGCATTATAATTT
CCGGGGCCAAATAAAGTGTA

Downstream 100 bases:

>100_bases
ATTTTCAGATCTTTTTTTCCAGAGCTTTTTCAACGATCTTTATCGCGCAAAGATCCCCGCACATCGAACAGGTTTCGCAT
TCCCCGTCCCGATCATGGAT

Product: iron dependent repressor

Products: NA

Alternate protein names: Signal Transduction Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Histidine Kinase; Diguanylate Cyclase With PAS/PAC Sensor; PAS/PAC Sensor Signal Transduction Histidine Kinase; Signaling Protein; Signal Transduction Protein; Sensor Histidine Kinase; Sensory Box Sensor Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase; PAS Fold Family; Multisensor Signal Transduction Histidine Kinase; PAS Sensor Protein; Signal-Transducing Histidine Kinase; Transcriptional Regulator; Two-Component Sensor Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Ggdef Domain Protein; Iron Dependent Repressor; Sensory Transduction Histidine Kinase; Two Component System Histidine Kinase; Sensory Transduction Protein; Sensor Histidine Kinase/Response Regulator

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MVEQTGEFSEILTLLRENPRGMSVTEIADATHLNRNTIARYMDNLLVSGRVEMRTFGKAKVFFLSKRVPVSAMLNLSSEM
VLLIDADLKVIQANESLVSFLSAEADDIVGKYVYDSACKTFCNDVLTDQIRAALQGETVRSELRLLKNGTDCYLDQRIYP
MVLPDGRPGVTVVWDDITENVNSADALEQSEAMFRRLVETIHDVIWSLDENFCIQYISPQITNVTGYSPEELTGRKFSEF
MPAGAAARFNWELASAVSRENGFMLPEFPFICKDKRKIYCEFSGSPVLLEEDSIFLGYNGALRDVTDRRDAELGAKRWKR
FLDGVMNNIPAIITVIGMESREYYYVNKSAEKFLQKSRAELSQMTSKEILAKIGSIRLTEAHDTVALTGKEARVFEDRIV
VNGETRYISAQVIPMNLSVDRQYLLTIVNDITEEDADRQRQMMSRELAFILEGVSSTKEMWDPLLDMLPKISGFESVAVY
QLSIFDDYTMFRSRNGRFAPAIHTNSMIHRIIRKGEPVIFDKHRMKLLPENTVSPMDQAKSLVLMPVLFEGRAVACVILG
SKTALAPDTVRRTLLLSTAFQISTVASRCLVQEKLQRERDRTRSYLDVAGVLLVAVNRDGNVEMLNKYGTKILGYTEAEL
MGRNWFTTVIPEKARQRRIDGFQKLIAGNFHEDDYVYEGVVRCKDGTEKNLRWRNTPVREECGSISGIVSSGEVV

Sequences:

>Translated_715_residues
MVEQTGEFSEILTLLRENPRGMSVTEIADATHLNRNTIARYMDNLLVSGRVEMRTFGKAKVFFLSKRVPVSAMLNLSSEM
VLLIDADLKVIQANESLVSFLSAEADDIVGKYVYDSACKTFCNDVLTDQIRAALQGETVRSELRLLKNGTDCYLDQRIYP
MVLPDGRPGVTVVWDDITENVNSADALEQSEAMFRRLVETIHDVIWSLDENFCIQYISPQITNVTGYSPEELTGRKFSEF
MPAGAAARFNWELASAVSRENGFMLPEFPFICKDKRKIYCEFSGSPVLLEEDSIFLGYNGALRDVTDRRDAELGAKRWKR
FLDGVMNNIPAIITVIGMESREYYYVNKSAEKFLQKSRAELSQMTSKEILAKIGSIRLTEAHDTVALTGKEARVFEDRIV
VNGETRYISAQVIPMNLSVDRQYLLTIVNDITEEDADRQRQMMSRELAFILEGVSSTKEMWDPLLDMLPKISGFESVAVY
QLSIFDDYTMFRSRNGRFAPAIHTNSMIHRIIRKGEPVIFDKHRMKLLPENTVSPMDQAKSLVLMPVLFEGRAVACVILG
SKTALAPDTVRRTLLLSTAFQISTVASRCLVQEKLQRERDRTRSYLDVAGVLLVAVNRDGNVEMLNKYGTKILGYTEAEL
MGRNWFTTVIPEKARQRRIDGFQKLIAGNFHEDDYVYEGVVRCKDGTEKNLRWRNTPVREECGSISGIVSSGEVV
>Mature_715_residues
MVEQTGEFSEILTLLRENPRGMSVTEIADATHLNRNTIARYMDNLLVSGRVEMRTFGKAKVFFLSKRVPVSAMLNLSSEM
VLLIDADLKVIQANESLVSFLSAEADDIVGKYVYDSACKTFCNDVLTDQIRAALQGETVRSELRLLKNGTDCYLDQRIYP
MVLPDGRPGVTVVWDDITENVNSADALEQSEAMFRRLVETIHDVIWSLDENFCIQYISPQITNVTGYSPEELTGRKFSEF
MPAGAAARFNWELASAVSRENGFMLPEFPFICKDKRKIYCEFSGSPVLLEEDSIFLGYNGALRDVTDRRDAELGAKRWKR
FLDGVMNNIPAIITVIGMESREYYYVNKSAEKFLQKSRAELSQMTSKEILAKIGSIRLTEAHDTVALTGKEARVFEDRIV
VNGETRYISAQVIPMNLSVDRQYLLTIVNDITEEDADRQRQMMSRELAFILEGVSSTKEMWDPLLDMLPKISGFESVAVY
QLSIFDDYTMFRSRNGRFAPAIHTNSMIHRIIRKGEPVIFDKHRMKLLPENTVSPMDQAKSLVLMPVLFEGRAVACVILG
SKTALAPDTVRRTLLLSTAFQISTVASRCLVQEKLQRERDRTRSYLDVAGVLLVAVNRDGNVEMLNKYGTKILGYTEAEL
MGRNWFTTVIPEKARQRRIDGFQKLIAGNFHEDDYVYEGVVRCKDGTEKNLRWRNTPVREECGSISGIVSSGEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80939; Mature: 80939

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQTGEFSEILTLLRENPRGMSVTEIADATHLNRNTIARYMDNLLVSGRVEMRTFGKAK
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCEE
VFFLSKRVPVSAMLNLSSEMVLLIDADLKVIQANESLVSFLSAEADDIVGKYVYDSACKT
EEEEECCCCHHHHHCCCCCEEEEEECCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHH
FCNDVLTDQIRAALQGETVRSELRLLKNGTDCYLDQRIYPMVLPDGRPGVTVVWDDITEN
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEEEECCHHCC
VNSADALEQSEAMFRRLVETIHDVIWSLDENFCIQYISPQITNVTGYSPEELTGRKFSEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCHHHCCCHHHHH
MPAGAAARFNWELASAVSRENGFMLPEFPFICKDKRKIYCEFSGSPVLLEEDSIFLGYNG
CCCCCCEEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCC
ALRDVTDRRDAELGAKRWKRFLDGVMNNIPAIITVIGMESREYYYVNKSAEKFLQKSRAE
CHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHH
LSQMTSKEILAKIGSIRLTEAHDTVALTGKEARVFEDRIVVNGETRYISAQVIPMNLSVD
HHHHHHHHHHHHHCCEEEEECCCEEEEECCCCEEEECEEEECCCEEEEEEEEEEEECCCC
RQYLLTIVNDITEEDADRQRQMMSRELAFILEGVSSTKEMWDPLLDMLPKISGFESVAVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
QLSIFDDYTMFRSRNGRFAPAIHTNSMIHRIIRKGEPVIFDKHRMKLLPENTVSPMDQAK
EEEECCCHHHHHCCCCCCCCEECHHHHHHHHHHCCCCEEEECCHHEECCCCCCCHHHHCC
SLVLMPVLFEGRAVACVILGSKTALAPDTVRRTLLLSTAFQISTVASRCLVQEKLQRERD
CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTRSYLDVAGVLLVAVNRDGNVEMLNKYGTKILGYTEAELMGRNWFTTVIPEKARQRRID
HHHHHHHHHEEEEEEECCCCCCHHHHHCCCEEECCCHHHHHCCCCEEHHCCHHHHHHHHH
GFQKLIAGNFHEDDYVYEGVVRCKDGTEKNLRWRNTPVREECGSISGIVSSGEVV
HHHHHHCCCCCCCCHHEECEEEECCCCCCCCEECCCCHHHHHCCHHCCCCCCCCC
>Mature Secondary Structure
MVEQTGEFSEILTLLRENPRGMSVTEIADATHLNRNTIARYMDNLLVSGRVEMRTFGKAK
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCEE
VFFLSKRVPVSAMLNLSSEMVLLIDADLKVIQANESLVSFLSAEADDIVGKYVYDSACKT
EEEEECCCCHHHHHCCCCCEEEEEECCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHH
FCNDVLTDQIRAALQGETVRSELRLLKNGTDCYLDQRIYPMVLPDGRPGVTVVWDDITEN
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEEEECCHHCC
VNSADALEQSEAMFRRLVETIHDVIWSLDENFCIQYISPQITNVTGYSPEELTGRKFSEF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCHHHCCCHHHHH
MPAGAAARFNWELASAVSRENGFMLPEFPFICKDKRKIYCEFSGSPVLLEEDSIFLGYNG
CCCCCCEEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCC
ALRDVTDRRDAELGAKRWKRFLDGVMNNIPAIITVIGMESREYYYVNKSAEKFLQKSRAE
CHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHH
LSQMTSKEILAKIGSIRLTEAHDTVALTGKEARVFEDRIVVNGETRYISAQVIPMNLSVD
HHHHHHHHHHHHHCCEEEEECCCEEEEECCCCEEEECEEEECCCEEEEEEEEEEEECCCC
RQYLLTIVNDITEEDADRQRQMMSRELAFILEGVSSTKEMWDPLLDMLPKISGFESVAVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
QLSIFDDYTMFRSRNGRFAPAIHTNSMIHRIIRKGEPVIFDKHRMKLLPENTVSPMDQAK
EEEECCCHHHHHCCCCCCCCEECHHHHHHHHHHCCCCEEEECCHHEECCCCCCCHHHHCC
SLVLMPVLFEGRAVACVILGSKTALAPDTVRRTLLLSTAFQISTVASRCLVQEKLQRERD
CEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTRSYLDVAGVLLVAVNRDGNVEMLNKYGTKILGYTEAELMGRNWFTTVIPEKARQRRID
HHHHHHHHHEEEEEEECCCCCCHHHHHCCCEEECCCHHHHHCCCCEEHHCCHHHHHHHHH
GFQKLIAGNFHEDDYVYEGVVRCKDGTEKNLRWRNTPVREECGSISGIVSSGEVV
HHHHHHCCCCCCCCHHEECEEEECCCCCCCCEECCCCHHHHHCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA