| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485025
Identifier: 124485025
GI number: 124485025
Start: 185688
End: 186122
Strand: Reverse
Name: 124485025
Synonym: Mlab_0198
Alternate gene names: NA
Gene position: 186122-185688 (Counterclockwise)
Preceding gene: 124485026
Following gene: 124485022
Centisome position: 10.31
GC content: 51.95
Gene sequence:
>435_bases ATGGATAAGGGCATTTACTGTCTTATCCTCGCGTGTGCAGACCCCTGCAAGGTCAAAATCGGGGCACTGGGATCCGTGGA ATTCCAGAAAGGCTGGTATCTGTATGCCGGTTCGGCGCTTGGTTCGGGCGGACTCTCCAGAGTTTCCCGGCATATTAGGT TTTTTCATGAACGATACCGAAAACCCAAATGGCACATCGATTATCTGATGGCAGCCGATGAAATCACCCTTACAGGAGTC GTCTGTGCAAAAACCGAAGAACGCCTCGAGTGCGTTCTCGCAAAAAACATCGGCGGATACAGCATAGCAGACTTCGGCTG CTCGGATTGTTCCTGTGCATCACACCTGTTCTACAGAACGGATCCGCCGGAGACGGAAGTCGCCCGTGCTTTTGAGAAAA CGGGACTTGTTCCGATCCATCATCTGATCCGGTAG
Upstream 100 bases:
>100_bases GCAGAACTGCCGGTGGAATCTCTTTGGCCCGGACATGAGATGCCGGTCGTAACCGACGCAAAACGCCATGTCCTCCTGTC GAAATACGATGTTGTAAGAT
Downstream 100 bases:
>100_bases GGCGAAAGAAGACTGATTTTTAGAATGATCCGGGCGATCTCCTCCGGAGGCTCCCGTTCGGGTTTTTCTTTCTGAATCCA GGTCAGAAACACATTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MDKGIYCLILACADPCKVKIGALGSVEFQKGWYLYAGSALGSGGLSRVSRHIRFFHERYRKPKWHIDYLMAADEITLTGV VCAKTEERLECVLAKNIGGYSIADFGCSDCSCASHLFYRTDPPETEVARAFEKTGLVPIHHLIR
Sequences:
>Translated_144_residues MDKGIYCLILACADPCKVKIGALGSVEFQKGWYLYAGSALGSGGLSRVSRHIRFFHERYRKPKWHIDYLMAADEITLTGV VCAKTEERLECVLAKNIGGYSIADFGCSDCSCASHLFYRTDPPETEVARAFEKTGLVPIHHLIR >Mature_144_residues MDKGIYCLILACADPCKVKIGALGSVEFQKGWYLYAGSALGSGGLSRVSRHIRFFHERYRKPKWHIDYLMAADEITLTGV VCAKTEERLECVLAKNIGGYSIADFGCSDCSCASHLFYRTDPPETEVARAFEKTGLVPIHHLIR
Specific function: Unknown
COG id: COG1833
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Nth/MutY family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011257 - InterPro: IPR002837 - InterPro: IPR004036 - InterPro: IPR003651 - InterPro: IPR003265 - InterPro: IPR000445 - InterPro: IPR003583 - InterPro: IPR023170 - InterPro: IPR000305 [H]
Pfam domain/function: PF01986 DUF123; PF00633 HHH; PF00730 HhH-GPD [H]
EC number: NA
Molecular weight: Translated: 16033; Mature: 16033
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKGIYCLILACADPCKVKIGALGSVEFQKGWYLYAGSALGSGGLSRVSRHIRFFHERYR CCCCEEEEEEECCCCCEEEECCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC KPKWHIDYLMAADEITLTGVVCAKTEERLECVLAKNIGGYSIADFGCSDCSCASHLFYRT CCCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHCEEECC DPPETEVARAFEKTGLVPIHHLIR CCCHHHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure MDKGIYCLILACADPCKVKIGALGSVEFQKGWYLYAGSALGSGGLSRVSRHIRFFHERYR CCCCEEEEEEECCCCCEEEECCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC KPKWHIDYLMAADEITLTGVVCAKTEERLECVLAKNIGGYSIADFGCSDCSCASHLFYRT CCCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHCCCCCCEECCCCCCCCCHHHCEEECC DPPETEVARAFEKTGLVPIHHLIR CCCHHHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]