| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485022
Identifier: 124485022
GI number: 124485022
Start: 182859
End: 184034
Strand: Reverse
Name: 124485022
Synonym: Mlab_0195
Alternate gene names: NA
Gene position: 184034-182859 (Counterclockwise)
Preceding gene: 124485025
Following gene: 124485021
Centisome position: 10.2
GC content: 51.7
Gene sequence:
>1176_bases ATGAACAGAAATAATCTTCGACACCTACTTCTTACAGCAGTCATCGTCTTCACGCTGATCATTTCCGGCACAGGGGCGGT ATCGGCTGAAACCCAGTCTACTTTCGTAATCAAGGATTTCTCCATGTATCCAACGTCTCTGATGTCGGGCGACTCGGGGA TCGTCACGGTCACGATACAAAATACCGGAACAACATTCGTACCAGTCAACCAGATCTTCATCAAAGATATTGACGGCATC AAATCATCAGTGACCCCGTATCAGAACCCGATCGGCGGCGTTGGAGCCGGCGATACCTTCACCTTATCTCTGCCGATCAC TTCGACAGGCGAAACCGGCACATTCTACCCGGTTCTGTATGTCGACTTCGGCGGCAACAACGGAAATTATCTGAAGTATC CGTTTGCAGTCATCGTTGACGATCAAAGCGTCGTCATCTCGATCACCAACCGCCCCGATGTCTTCGAGCCGGACACCACG CAAACCGTCGCTTTCACGATCGGAAACCTGAGAACGAATGCGATCGAAGCGGTCGAAGTCACGGCGTCCGGAACCGGCGT CACCACCAAACAGACCTCGGTCTTCCTTGGAACGATCGATGCAAACAAAGCAGCAAGCGGAAACATAAGCGTTACCACAA CTGCAGAGACGAAAGAGGTCACCTTTGATGTGACCTACCGGAACGGAGCCAACTGGCATACCGAAAGCGTCACGCTTCCT CTTGAGTCGGGCATTTCCAAAACCGGCGCTGAACTGATCGTCAACAACCTCGAAGTGAAGAACTCGGGAACGTACTATAC GATCACCGGCGATGTCAATAACGCCGGCCTTACAACAGCCAAGGCGCTCGTCGTCACAACGGAAGGAGTGACCAAAACAG GACTCTACCCGTCCTACGTTGTTGGATCCATGGATGAAGACGGTCTTTCCGAGTTCGAAGTGACCTTCAGTAACCCGGCA AGCGACAACGTAACTCTGGTCTTTACCTATAAGGATGCGAACGGAAACGTCTACACGGAAAAACAGACAGTCCCAATCAC GTCGGCAGTCACCGAAGCACAGACGGCAGGTGAATCAAGCCCGGTCGCCACCGTCTTGATCGTTATTGTTATCCTCGTCA TTCTTGCCGGCGGTTTCGTTGCCTGGAAGAAAGGTAAAATATTTGCACGGAAGTAA
Upstream 100 bases:
>100_bases CGGTAAATATCTGCAGCGAAAGAGAGGATTTGACCCCATAGAAAGTATTTATCCCCCCACCCACAACTTATTAAGAATAA AAATAAGCTAAAGGTATTCC
Downstream 100 bases:
>100_bases GCCATGAACTCGATCCCTGTGGTCGAACTGCATGACGTCTCCAAAATCTATCCGATGCCCGCCGGAGACGTCCATGCATT AAACCACGTAAATTTCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNRNNLRHLLLTAVIVFTLIISGTGAVSAETQSTFVIKDFSMYPTSLMSGDSGIVTVTIQNTGTTFVPVNQIFIKDIDGI KSSVTPYQNPIGGVGAGDTFTLSLPITSTGETGTFYPVLYVDFGGNNGNYLKYPFAVIVDDQSVVISITNRPDVFEPDTT QTVAFTIGNLRTNAIEAVEVTASGTGVTTKQTSVFLGTIDANKAASGNISVTTTAETKEVTFDVTYRNGANWHTESVTLP LESGISKTGAELIVNNLEVKNSGTYYTITGDVNNAGLTTAKALVVTTEGVTKTGLYPSYVVGSMDEDGLSEFEVTFSNPA SDNVTLVFTYKDANGNVYTEKQTVPITSAVTEAQTAGESSPVATVLIVIVILVILAGGFVAWKKGKIFARK
Sequences:
>Translated_391_residues MNRNNLRHLLLTAVIVFTLIISGTGAVSAETQSTFVIKDFSMYPTSLMSGDSGIVTVTIQNTGTTFVPVNQIFIKDIDGI KSSVTPYQNPIGGVGAGDTFTLSLPITSTGETGTFYPVLYVDFGGNNGNYLKYPFAVIVDDQSVVISITNRPDVFEPDTT QTVAFTIGNLRTNAIEAVEVTASGTGVTTKQTSVFLGTIDANKAASGNISVTTTAETKEVTFDVTYRNGANWHTESVTLP LESGISKTGAELIVNNLEVKNSGTYYTITGDVNNAGLTTAKALVVTTEGVTKTGLYPSYVVGSMDEDGLSEFEVTFSNPA SDNVTLVFTYKDANGNVYTEKQTVPITSAVTEAQTAGESSPVATVLIVIVILVILAGGFVAWKKGKIFARK >Mature_391_residues MNRNNLRHLLLTAVIVFTLIISGTGAVSAETQSTFVIKDFSMYPTSLMSGDSGIVTVTIQNTGTTFVPVNQIFIKDIDGI KSSVTPYQNPIGGVGAGDTFTLSLPITSTGETGTFYPVLYVDFGGNNGNYLKYPFAVIVDDQSVVISITNRPDVFEPDTT QTVAFTIGNLRTNAIEAVEVTASGTGVTTKQTSVFLGTIDANKAASGNISVTTTAETKEVTFDVTYRNGANWHTESVTLP LESGISKTGAELIVNNLEVKNSGTYYTITGDVNNAGLTTAKALVVTTEGVTKTGLYPSYVVGSMDEDGLSEFEVTFSNPA SDNVTLVFTYKDANGNVYTEKQTVPITSAVTEAQTAGESSPVATVLIVIVILVILAGGFVAWKKGKIFARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41371; Mature: 41371
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRNNLRHLLLTAVIVFTLIISGTGAVSAETQSTFVIKDFSMYPTSLMSGDSGIVTVTIQ CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCHHHHCCCCCEEEEEEE NTGTTFVPVNQIFIKDIDGIKSSVTPYQNPIGGVGAGDTFTLSLPITSTGETGTFYPVLY CCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEE VDFGGNNGNYLKYPFAVIVDDQSVVISITNRPDVFEPDTTQTVAFTIGNLRTNAIEAVEV EEECCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEE TASGTGVTTKQTSVFLGTIDANKAASGNISVTTTAETKEVTFDVTYRNGANWHTESVTLP EECCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEEEEE LESGISKTGAELIVNNLEVKNSGTYYTITGDVNNAGLTTAKALVVTTEGVTKTGLYPSYV HHCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEECCCEECCCCHHHE VGSMDEDGLSEFEVTFSNPASDNVTLVFTYKDANGNVYTEKQTVPITSAVTEAQTAGESS ECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEECCEECEEHHHHHHHHHCCCCC PVATVLIVIVILVILAGGFVAWKKGKIFARK CHHHHHHHHHHHHHHCCCEEEEECCEEEECC >Mature Secondary Structure MNRNNLRHLLLTAVIVFTLIISGTGAVSAETQSTFVIKDFSMYPTSLMSGDSGIVTVTIQ CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCHHHHCCCCCEEEEEEE NTGTTFVPVNQIFIKDIDGIKSSVTPYQNPIGGVGAGDTFTLSLPITSTGETGTFYPVLY CCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEE VDFGGNNGNYLKYPFAVIVDDQSVVISITNRPDVFEPDTTQTVAFTIGNLRTNAIEAVEV EEECCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEE TASGTGVTTKQTSVFLGTIDANKAASGNISVTTTAETKEVTFDVTYRNGANWHTESVTLP EECCCCCEEEEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEEEEE LESGISKTGAELIVNNLEVKNSGTYYTITGDVNNAGLTTAKALVVTTEGVTKTGLYPSYV HHCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEECCCEECCCCHHHE VGSMDEDGLSEFEVTFSNPASDNVTLVFTYKDANGNVYTEKQTVPITSAVTEAQTAGESS ECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEECCEECEEHHHHHHHHHCCCCC PVATVLIVIVILVILAGGFVAWKKGKIFARK CHHHHHHHHHHHHHHCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA