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The map label for this gene is nifE [H]

Identifier: 124484991

GI number: 124484991

Start: 149407

End: 150426

Strand: Reverse

Name: nifE [H]

Synonym: Mlab_0164

Alternate gene names: 124484991

Gene position: 150426-149407 (Counterclockwise)

Preceding gene: 124484992

Following gene: 124484990

Centisome position: 8.33

GC content: 56.18

Gene sequence:

>1020_bases
ATGGCCGGGTGCACTCTTACGGGGGCCCTTTCCGTCGCCTGTTTTATCCCGGGAGCAGTAACGGTAGTGCATGCCCCCAA
AGGCTGCGCCCACCAGACGTTTTCCATGCTCCATGCGATGATGAACGAAGCGGAGACGAAAATCGTTCCGGAGATTCTTG
TCTCGGGGCTTTCCGACAAAGATGTCATCTTCGGCGGAGAGGATTGTCTCAGACAGGCTCTCGACCGTGCAGCAGCAAAG
GATCCGGAACTGATCATCGTTGTGACCTCCTGTGTCCCGGAAACAATCGGGGACGACTGTCTGGCCGTCTGCCGGGAACA
TGCCTGTGCGGACCGGACCATCTATATCCCAACGTCCGGGTTTCTCGGAGGAAGTGCAAAGGACGGCGAGAATGCTGCAT
TGATCGGCCTTTCGGCTCTGGCAAAACCGGCGGATCCGATTCCGGGGACAGTCGCAATCATCGGTGAAAAAAATCTGGAG
TCCGAGGTCGAGGAGAATTTTGCCGAGGTTGCCCGGCTGCTCGATCTTCTGGGCCTGACCGTTTCGGTCAGATTCTGCAG
AAATGCCGATGCTGCAGAACTTCAAAAACTTGGAACGGCGTCCTGTTTTATTTTACGCGACGGTCGATCGGCACATGCCG
GACGCGAACTTGGAAAGAGATTTGGCCGGCCGGTGATTCCCGAGTTTCCGCGGGGACTTTCCGGATCAATCGCATTCCTG
CAGGAGACGGGAAAAGCCGCCGGAGTTTCTTCAGAAAAAATCAATGAGGCGATCTCGAAAGAGACCGAGCACCAGAAGAA
AGTGCTCGCGAAATTTGCGGATCTTGCCGGCCGCGATGTCTGCCTCGGTGTCGAACCGTTCGAAGGAACACTCGCCGTAG
CAAAAGAAGCGCTCGAAAGACTGGGGATGATCGAATCGCCGACCGGAATCAAGGTCAGGCTTCCGTTCTATCTGCCGGTC
GGTGTGTCCGGGACCGTGAAGATGCTCCATCTTTGGAGGAGGACGATCCTGCATGGATGA

Upstream 100 bases:

>100_bases
TGTGCCAAAACCATTCTGGAAAACACCGATCTTCGGATTCCGACCCCGCTTGCATTAGAGGAACTGGAAGAGCTTGCAAG
ACACTATCTCTGAATCACGG

Downstream 100 bases:

>100_bases
AGGACTGTGCGTAAATCCGGTCTGGCCGTGCGCGATGACCGGGGCCTGTTCAGTGCTTGCCGGCTTCTCCGGACTGAACG
TGCTGATCCACGGTTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAGCTLTGALSVACFIPGAVTVVHAPKGCAHQTFSMLHAMMNEAETKIVPEILVSGLSDKDVIFGGEDCLRQALDRAAAK
DPELIIVVTSCVPETIGDDCLAVCREHACADRTIYIPTSGFLGGSAKDGENAALIGLSALAKPADPIPGTVAIIGEKNLE
SEVEENFAEVARLLDLLGLTVSVRFCRNADAAELQKLGTASCFILRDGRSAHAGRELGKRFGRPVIPEFPRGLSGSIAFL
QETGKAAGVSSEKINEAISKETEHQKKVLAKFADLAGRDVCLGVEPFEGTLAVAKEALERLGMIESPTGIKVRLPFYLPV
GVSGTVKMLHLWRRTILHG

Sequences:

>Translated_339_residues
MAGCTLTGALSVACFIPGAVTVVHAPKGCAHQTFSMLHAMMNEAETKIVPEILVSGLSDKDVIFGGEDCLRQALDRAAAK
DPELIIVVTSCVPETIGDDCLAVCREHACADRTIYIPTSGFLGGSAKDGENAALIGLSALAKPADPIPGTVAIIGEKNLE
SEVEENFAEVARLLDLLGLTVSVRFCRNADAAELQKLGTASCFILRDGRSAHAGRELGKRFGRPVIPEFPRGLSGSIAFL
QETGKAAGVSSEKINEAISKETEHQKKVLAKFADLAGRDVCLGVEPFEGTLAVAKEALERLGMIESPTGIKVRLPFYLPV
GVSGTVKMLHLWRRTILHG
>Mature_338_residues
AGCTLTGALSVACFIPGAVTVVHAPKGCAHQTFSMLHAMMNEAETKIVPEILVSGLSDKDVIFGGEDCLRQALDRAAAKD
PELIIVVTSCVPETIGDDCLAVCREHACADRTIYIPTSGFLGGSAKDGENAALIGLSALAKPADPIPGTVAIIGEKNLES
EVEENFAEVARLLDLLGLTVSVRFCRNADAAELQKLGTASCFILRDGRSAHAGRELGKRFGRPVIPEFPRGLSGSIAFLQ
ETGKAAGVSSEKINEAISKETEHQKKVLAKFADLAGRDVCLGVEPFEGTLAVAKEALERLGMIESPTGIKVRLPFYLPVG
VSGTVKMLHLWRRTILHG

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005973 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 35901; Mature: 35770

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGCTLTGALSVACFIPGAVTVVHAPKGCAHQTFSMLHAMMNEAETKIVPEILVSGLSDK
CCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DVIFGGEDCLRQALDRAAAKDPELIIVVTSCVPETIGDDCLAVCREHACADRTIYIPTSG
CEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHCCHHHHHHHHHHHCCCCEEEEECCC
FLGGSAKDGENAALIGLSALAKPADPIPGTVAIIGEKNLESEVEENFAEVARLLDLLGLT
CCCCCCCCCCCEEEEEHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
VSVRFCRNADAAELQKLGTASCFILRDGRSAHAGRELGKRFGRPVIPEFPRGLSGSIAFL
HEEHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
QETGKAAGVSSEKINEAISKETEHQKKVLAKFADLAGRDVCLGVEPFEGTLAVAKEALER
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
LGMIESPTGIKVRLPFYLPVGVSGTVKMLHLWRRTILHG
CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGCTLTGALSVACFIPGAVTVVHAPKGCAHQTFSMLHAMMNEAETKIVPEILVSGLSDK
CCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DVIFGGEDCLRQALDRAAAKDPELIIVVTSCVPETIGDDCLAVCREHACADRTIYIPTSG
CEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCHHCCHHHHHHHHHHHCCCCEEEEECCC
FLGGSAKDGENAALIGLSALAKPADPIPGTVAIIGEKNLESEVEENFAEVARLLDLLGLT
CCCCCCCCCCCEEEEEHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
VSVRFCRNADAAELQKLGTASCFILRDGRSAHAGRELGKRFGRPVIPEFPRGLSGSIAFL
HEEHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
QETGKAAGVSSEKINEAISKETEHQKKVLAKFADLAGRDVCLGVEPFEGTLAVAKEALER
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
LGMIESPTGIKVRLPFYLPVGVSGTVKMLHLWRRTILHG
CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2726466 [H]