Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124484902

Identifier: 124484902

GI number: 124484902

Start: 77034

End: 77729

Strand: Reverse

Name: 124484902

Synonym: Mlab_0073

Alternate gene names: NA

Gene position: 77729-77034 (Counterclockwise)

Preceding gene: 124484904

Following gene: 124484901

Centisome position: 4.31

GC content: 48.85

Gene sequence:

>696_bases
ATGTTAATCGCCATAACCCGCCATACCGGGGCTTTAGAGGACGCCGCCCTTTGTGAAAAATACAATCATAAAGCAAAGGT
CGTTGCACCCATTAAACCGGTAAAAAACATGGAGGTTATCGGGAGTTTTGTTAAAGCGGCAAATGACGGGGAGTTCGATG
CTATCTTTTTCCCGAATGCATTTGTCGCTGAAAAACTCGGGCCCTGCATCAAGCCGGAACTGGCATCCAAAGTCAGAATA
ATAGCGAACGGGCCGCAAACCGCGAAAGTACTACACAACATCGGACTCGCTGCAGAGATGCTGCCGTTTTTCTATTCGAA
AGATCTGGTTCTGTATCTCGACCGGTGGATCCGCGGGAAGAGGATCGGCATTCCAAGAGCAGGGAATACCTACCCCAAAC
TTGCCGATGACATTAAGCATGCGGGAGGGATTCCCGTTGAATACAGATGCTATGACGTTGAGAAAACCGATGAAGTGATG
GATCTTACTGGTGTTGGCGCAATATTATTCACGAGTCCAATGGCATTCAAACTGGCAAAACTTCCAAAGATGGAAAACAT
CATCCAAATGGCGATAGGCGAGGTAACGGCAAACGAAATGATGTACGGAGGCGATGCCCCGGCGGTGATTGGCGACGGAT
CGATCGAAGGAACACTCAAAGCTCTCAACGCCTATCTTGTGACGGAGAGTCACTGA

Upstream 100 bases:

>100_bases
TGCCAAAGATTACACCCGCTAAAAATCCAGCCGCCACCCCGAACATAGTAGTGATTTAGACACAACGACTATTAAACCCA
ACAGTCCAATAATTTCATAT

Downstream 100 bases:

>100_bases
TGGGATATACCGGGATCATTTTGGTTGACAAGCCGAGAGGGCCCACGAGTCATCAGGTTGCTGCCTGGGTCGGCAAGATG
CTGAAGTCGGACGTCGGTCA

Product: Fe-S protein-like protein

Products: NA

Alternate protein names: Uroporphyrinogen-III Synthase-Like; Fe-S Protein-Like Protein; Uroporphyrinogen-III Synthase

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNAFVAEKLGPCIKPELASKVRI
IANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVM
DLTGVGAILFTSPMAFKLAKLPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH

Sequences:

>Translated_231_residues
MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNAFVAEKLGPCIKPELASKVRI
IANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVM
DLTGVGAILFTSPMAFKLAKLPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH
>Mature_231_residues
MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNAFVAEKLGPCIKPELASKVRI
IANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVM
DLTGVGAILFTSPMAFKLAKLPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25124; Mature: 25124

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNA
CEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCH
FVAEKLGPCIKPELASKVRIIANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGK
HHHHHCCCCCCCCHHCCEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCC
RIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVMDLTGVGAILFTSPMAFKLAK
CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCHHHHCCCHHHHHHH
LPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH
CCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHEEEEEECCC
>Mature Secondary Structure
MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNA
CEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCH
FVAEKLGPCIKPELASKVRIIANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGK
HHHHHCCCCCCCCHHCCEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCC
RIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVMDLTGVGAILFTSPMAFKLAK
CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCHHHHCCCHHHHHHH
LPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH
CCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA