| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124484902
Identifier: 124484902
GI number: 124484902
Start: 77034
End: 77729
Strand: Reverse
Name: 124484902
Synonym: Mlab_0073
Alternate gene names: NA
Gene position: 77729-77034 (Counterclockwise)
Preceding gene: 124484904
Following gene: 124484901
Centisome position: 4.31
GC content: 48.85
Gene sequence:
>696_bases ATGTTAATCGCCATAACCCGCCATACCGGGGCTTTAGAGGACGCCGCCCTTTGTGAAAAATACAATCATAAAGCAAAGGT CGTTGCACCCATTAAACCGGTAAAAAACATGGAGGTTATCGGGAGTTTTGTTAAAGCGGCAAATGACGGGGAGTTCGATG CTATCTTTTTCCCGAATGCATTTGTCGCTGAAAAACTCGGGCCCTGCATCAAGCCGGAACTGGCATCCAAAGTCAGAATA ATAGCGAACGGGCCGCAAACCGCGAAAGTACTACACAACATCGGACTCGCTGCAGAGATGCTGCCGTTTTTCTATTCGAA AGATCTGGTTCTGTATCTCGACCGGTGGATCCGCGGGAAGAGGATCGGCATTCCAAGAGCAGGGAATACCTACCCCAAAC TTGCCGATGACATTAAGCATGCGGGAGGGATTCCCGTTGAATACAGATGCTATGACGTTGAGAAAACCGATGAAGTGATG GATCTTACTGGTGTTGGCGCAATATTATTCACGAGTCCAATGGCATTCAAACTGGCAAAACTTCCAAAGATGGAAAACAT CATCCAAATGGCGATAGGCGAGGTAACGGCAAACGAAATGATGTACGGAGGCGATGCCCCGGCGGTGATTGGCGACGGAT CGATCGAAGGAACACTCAAAGCTCTCAACGCCTATCTTGTGACGGAGAGTCACTGA
Upstream 100 bases:
>100_bases TGCCAAAGATTACACCCGCTAAAAATCCAGCCGCCACCCCGAACATAGTAGTGATTTAGACACAACGACTATTAAACCCA ACAGTCCAATAATTTCATAT
Downstream 100 bases:
>100_bases TGGGATATACCGGGATCATTTTGGTTGACAAGCCGAGAGGGCCCACGAGTCATCAGGTTGCTGCCTGGGTCGGCAAGATG CTGAAGTCGGACGTCGGTCA
Product: Fe-S protein-like protein
Products: NA
Alternate protein names: Uroporphyrinogen-III Synthase-Like; Fe-S Protein-Like Protein; Uroporphyrinogen-III Synthase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNAFVAEKLGPCIKPELASKVRI IANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVM DLTGVGAILFTSPMAFKLAKLPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH
Sequences:
>Translated_231_residues MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNAFVAEKLGPCIKPELASKVRI IANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVM DLTGVGAILFTSPMAFKLAKLPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH >Mature_231_residues MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNAFVAEKLGPCIKPELASKVRI IANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGKRIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVM DLTGVGAILFTSPMAFKLAKLPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25124; Mature: 25124
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNA CEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCH FVAEKLGPCIKPELASKVRIIANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGK HHHHHCCCCCCCCHHCCEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCC RIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVMDLTGVGAILFTSPMAFKLAK CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCHHHHCCCHHHHHHH LPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH CCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHEEEEEECCC >Mature Secondary Structure MLIAITRHTGALEDAALCEKYNHKAKVVAPIKPVKNMEVIGSFVKAANDGEFDAIFFPNA CEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCH FVAEKLGPCIKPELASKVRIIANGPQTAKVLHNIGLAAEMLPFFYSKDLVLYLDRWIRGK HHHHHCCCCCCCCHHCCEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHCCC RIGIPRAGNTYPKLADDIKHAGGIPVEYRCYDVEKTDEVMDLTGVGAILFTSPMAFKLAK CCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCHHHHCCCHHHHHHH LPKMENIIQMAIGEVTANEMMYGGDAPAVIGDGSIEGTLKALNAYLVTESH CCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA