Click here to switch to the map view.

The map label for this gene is 124484846

Identifier: 124484846

GI number: 124484846

Start: 17224

End: 19068

Strand: Reverse

Name: 124484846

Synonym: Mlab_0017

Alternate gene names: NA

Gene position: 19068-17224 (Counterclockwise)

Preceding gene: 124484847

Following gene: 124484845

Centisome position: 1.06

GC content: 51.82

Gene sequence:

>1845_bases
ATGACCAACGACACGAAGCAAAAAATCATTTACGCCGCATCCATGGCGGCAACATTTCAACCCGACTCATTATCCAACGA
TAAACTGGAGGCTGCCACAAAAGGCCACGGTGCTCTGGTAATTCCCGTCTATGCAGCTGCAAACTCTATCGCAGAAGACA
TTTTCGGTTCGCTTTCGGGAAAGCAACCAAATTCAGCGGAGAAAATGACGGTGCTGGACGCAGCACTTGGTGAACTCCCG
CTGGACACCGTCATAGAAAAAGCTGTGAGAGCGGCGGCAAATGCCGGATCTGCTCCGGAAAATACCGCGTTGATCGTTGC
CGCGCTCGCTTACTTTGCAGGGTCGGCCGCACGGTCCGGTGTCCCTCTCGGAAACAGAAAACTTGGTGCTATGGCAAGAA
TGCATGCGGGAGGCGCCAGAACAAGCGCTATTGCCTTAGTAACCGGAAAATCCACACACAGGATCCAGGCATTTCCCGCC
TACATGGCAATCTACAAAGCTCTTGAAGAGAAAAAGCTCACCAGTGTCGACGGCTCGCTCCTTCCGGGATTCATCTCCGG
CGGAACGATCTATGGTCACTCTGCACTTGGAGAAGACTACAACATTCCAGAGCTTGCCTACAACGCCGCACAGGTTGGAA
CAAAGGCAATGCTGAATGCGATGGCCGGAGCCGGCGTCACGCCGCTTGCCCTTTGGCCGGCATTGATCGGTTCGGCGGTG
ACGATGGAAATCGTACATCCTGACGCAATTCTCGGAGAGGAATTTGGCAAATTCGGTGCTGTTAACTCCTCGTATATGGC
AGGAAAAGGTGCCCGCGATGCGGCAAAGCTCCCGGAAAAACTGCATATTCGCGGCACGCACGAGGAATATGACACGGCAA
CACTCTTAGGAGATTTTGGTCTCATTCTCAAAGATGTGGGTGGACCCTCTGTTATCGGGTCCATGGCATTTTCGGAGATC
TTTGCCGGATTTGAAGAAGCGGCAATGATCGGCGCAGGATTTTCCGGAGGGCCGGTCAATGCTCCTCTGGGTCATGTGAT
TGGAGATATTGTTCCCGCTCTTCGCTTGTTAATGCAGAACGGAGGCGATGTGTTTGCGGCGGCGGACGTCATCAGGGAAT
ACAAGATGAACTCATTCATCGACCCGGAGTTGGCCATTTGCAGTTTGAACACCATCGCACGGAAAGCCGAGCAGGTGTCA
CGAGGAAAAATCACGAATGTGTGTATCTTAGCATCCGAAGGGGTCCGTGACAGAGCAATCTACCGTCGTGCAGACAAGAC
CTACGAGATGATGAGCAGTGGAAAATCTTTAGCCGATGCTGCAAAACTCTTGGATGAAGAACGCAAAGCATACGTCGAGA
AGAGAGGATCGACAATCCTTTCAGGATTCACCGGTCATGCTATTGAACTGAAATTCACGGAACTCAAACCCCATGGAAGA
CGGACGGATAAGTTCACCGAACGTTACTGGGGTTTTGATTCATATGTTTCCTATGATATAAAAATCGACGGAAAGCCATA
TCATGTAGAGAATTTAAGCGGAAAAGAGGTTCCCGCTTTTGCGCTGGACGGTAAAAACAGAGATAATCCGGATTGGGGCA
TGGCCCTGCAGTGCGGCGCAATCCTCGCGCAGGAACTGCAGTACATCGGGCACACGATCATCAATGTCACGGTCCCGGCG
GCCGTCGGCAGTCTCTTCGGTCTGGAGGCAAAAGCAGCGGCAAAAGAGGCTGAAGACGGGGCATATCTCACGCGGTCGAT
TCCAGGTGCAAAAGAAAAGGCAACTGAAGTTGCAAAACTCTCCCAGCTGATCTATGCAAAGATGGAAGAGCCGTTTCCAG
AATGA

Upstream 100 bases:

>100_bases
TCACCATAATAATAAAGATAAATTTATTTACTTATGACCTATTGTGAAATGTATATATGGTTTGAACATCTAACTCTCAC
AAAATCAGAGGTGGAATTTC

Downstream 100 bases:

>100_bases
GAACGTTATACATTGATCCGAGAATCGGAGGAATCAGCGGAGCTTCCTTAACGGCGGCTCTTTCTGATCTTGGCGATGTC
GAAGATGTGAGAAAAACCGC

Product: aIF-2BII family translation initiation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MTNDTKQKIIYAASMAATFQPDSLSNDKLEAATKGHGALVIPVYAAANSIAEDIFGSLSGKQPNSAEKMTVLDAALGELP
LDTVIEKAVRAAANAGSAPENTALIVAALAYFAGSAARSGVPLGNRKLGAMARMHAGGARTSAIALVTGKSTHRIQAFPA
YMAIYKALEEKKLTSVDGSLLPGFISGGTIYGHSALGEDYNIPELAYNAAQVGTKAMLNAMAGAGVTPLALWPALIGSAV
TMEIVHPDAILGEEFGKFGAVNSSYMAGKGARDAAKLPEKLHIRGTHEEYDTATLLGDFGLILKDVGGPSVIGSMAFSEI
FAGFEEAAMIGAGFSGGPVNAPLGHVIGDIVPALRLLMQNGGDVFAAADVIREYKMNSFIDPELAICSLNTIARKAEQVS
RGKITNVCILASEGVRDRAIYRRADKTYEMMSSGKSLADAAKLLDEERKAYVEKRGSTILSGFTGHAIELKFTELKPHGR
RTDKFTERYWGFDSYVSYDIKIDGKPYHVENLSGKEVPAFALDGKNRDNPDWGMALQCGAILAQELQYIGHTIINVTVPA
AVGSLFGLEAKAAAKEAEDGAYLTRSIPGAKEKATEVAKLSQLIYAKMEEPFPE

Sequences:

>Translated_614_residues
MTNDTKQKIIYAASMAATFQPDSLSNDKLEAATKGHGALVIPVYAAANSIAEDIFGSLSGKQPNSAEKMTVLDAALGELP
LDTVIEKAVRAAANAGSAPENTALIVAALAYFAGSAARSGVPLGNRKLGAMARMHAGGARTSAIALVTGKSTHRIQAFPA
YMAIYKALEEKKLTSVDGSLLPGFISGGTIYGHSALGEDYNIPELAYNAAQVGTKAMLNAMAGAGVTPLALWPALIGSAV
TMEIVHPDAILGEEFGKFGAVNSSYMAGKGARDAAKLPEKLHIRGTHEEYDTATLLGDFGLILKDVGGPSVIGSMAFSEI
FAGFEEAAMIGAGFSGGPVNAPLGHVIGDIVPALRLLMQNGGDVFAAADVIREYKMNSFIDPELAICSLNTIARKAEQVS
RGKITNVCILASEGVRDRAIYRRADKTYEMMSSGKSLADAAKLLDEERKAYVEKRGSTILSGFTGHAIELKFTELKPHGR
RTDKFTERYWGFDSYVSYDIKIDGKPYHVENLSGKEVPAFALDGKNRDNPDWGMALQCGAILAQELQYIGHTIINVTVPA
AVGSLFGLEAKAAAKEAEDGAYLTRSIPGAKEKATEVAKLSQLIYAKMEEPFPE
>Mature_613_residues
TNDTKQKIIYAASMAATFQPDSLSNDKLEAATKGHGALVIPVYAAANSIAEDIFGSLSGKQPNSAEKMTVLDAALGELPL
DTVIEKAVRAAANAGSAPENTALIVAALAYFAGSAARSGVPLGNRKLGAMARMHAGGARTSAIALVTGKSTHRIQAFPAY
MAIYKALEEKKLTSVDGSLLPGFISGGTIYGHSALGEDYNIPELAYNAAQVGTKAMLNAMAGAGVTPLALWPALIGSAVT
MEIVHPDAILGEEFGKFGAVNSSYMAGKGARDAAKLPEKLHIRGTHEEYDTATLLGDFGLILKDVGGPSVIGSMAFSEIF
AGFEEAAMIGAGFSGGPVNAPLGHVIGDIVPALRLLMQNGGDVFAAADVIREYKMNSFIDPELAICSLNTIARKAEQVSR
GKITNVCILASEGVRDRAIYRRADKTYEMMSSGKSLADAAKLLDEERKAYVEKRGSTILSGFTGHAIELKFTELKPHGRR
TDKFTERYWGFDSYVSYDIKIDGKPYHVENLSGKEVPAFALDGKNRDNPDWGMALQCGAILAQELQYIGHTIINVTVPAA
VGSLFGLEAKAAAKEAEDGAYLTRSIPGAKEKATEVAKLSQLIYAKMEEPFPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64979; Mature: 64848

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDTKQKIIYAASMAATFQPDSLSNDKLEAATKGHGALVIPVYAAANSIAEDIFGSLSG
CCCCHHHHEEEEEHHHEEECCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC
KQPNSAEKMTVLDAALGELPLDTVIEKAVRAAANAGSAPENTALIVAALAYFAGSAARSG
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCC
VPLGNRKLGAMARMHAGGARTSAIALVTGKSTHRIQAFPAYMAIYKALEEKKLTSVDGSL
CCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC
LPGFISGGTIYGHSALGEDYNIPELAYNAAQVGTKAMLNAMAGAGVTPLALWPALIGSAV
CCHHHCCCEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE
TMEIVHPDAILGEEFGKFGAVNSSYMAGKGARDAAKLPEKLHIRGTHEEYDTATLLGDFG
EEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHH
LILKDVGGPSVIGSMAFSEIFAGFEEAAMIGAGFSGGPVNAPLGHVIGDIVPALRLLMQN
HHHHCCCCCHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GGDVFAAADVIREYKMNSFIDPELAICSLNTIARKAEQVSRGKITNVCILASEGVRDRAI
CCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH
YRRADKTYEMMSSGKSLADAAKLLDEERKAYVEKRGSTILSGFTGHAIELKFTELKPHGR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCC
RTDKFTERYWGFDSYVSYDIKIDGKPYHVENLSGKEVPAFALDGKNRDNPDWGMALQCGA
CCHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHH
ILAQELQYIGHTIINVTVPAAVGSLFGLEAKAAAKEAEDGAYLTRSIPGAKEKATEVAKL
HHHHHHHHHCHHHEEEEHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
SQLIYAKMEEPFPE
HHHHHHHHCCCCCC
>Mature Secondary Structure 
TNDTKQKIIYAASMAATFQPDSLSNDKLEAATKGHGALVIPVYAAANSIAEDIFGSLSG
CCCHHHHEEEEEHHHEEECCCCCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC
KQPNSAEKMTVLDAALGELPLDTVIEKAVRAAANAGSAPENTALIVAALAYFAGSAARSG
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCC
VPLGNRKLGAMARMHAGGARTSAIALVTGKSTHRIQAFPAYMAIYKALEEKKLTSVDGSL
CCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC
LPGFISGGTIYGHSALGEDYNIPELAYNAAQVGTKAMLNAMAGAGVTPLALWPALIGSAV
CCHHHCCCEEEECHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCE
TMEIVHPDAILGEEFGKFGAVNSSYMAGKGARDAAKLPEKLHIRGTHEEYDTATLLGDFG
EEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHH
LILKDVGGPSVIGSMAFSEIFAGFEEAAMIGAGFSGGPVNAPLGHVIGDIVPALRLLMQN
HHHHCCCCCHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC
GGDVFAAADVIREYKMNSFIDPELAICSLNTIARKAEQVSRGKITNVCILASEGVRDRAI
CCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH
YRRADKTYEMMSSGKSLADAAKLLDEERKAYVEKRGSTILSGFTGHAIELKFTELKPHGR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCC
RTDKFTERYWGFDSYVSYDIKIDGKPYHVENLSGKEVPAFALDGKNRDNPDWGMALQCGA
CCHHHHHHHCCCCCEEEEEEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHH
ILAQELQYIGHTIINVTVPAAVGSLFGLEAKAAAKEAEDGAYLTRSIPGAKEKATEVAKL
HHHHHHHHHCHHHEEEEHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
SQLIYAKMEEPFPE
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]