| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266201
Identifier: 124266201
GI number: 124266201
Start: 1070362
End: 1071450
Strand: Reverse
Name: 124266201
Synonym: Mpe_A1008
Alternate gene names: NA
Gene position: 1071450-1070362 (Counterclockwise)
Preceding gene: 124266202
Following gene: 124266198
Centisome position: 26.49
GC content: 71.63
Gene sequence:
>1089_bases ATGCCCAACAAGGTTCTGATCGCCGGCGCCAGCGGCGTGGTCGGTGCGGCCGCGGTCGACGCCTTCCTCGCCGGCGGCTG GGAGGTGGTGGCGTTGTCGCGGCGGCGGCCCGAGCTGACGCACGAGCGGCCCTACACCCACCTCGCGGTCGACCTGCGCG ATGCCGCGGCCAGCCGCGCCGCGCTCGGCGCACTGACCGGCATCACCCACGTCGTCTACGCCGCGCTGTTCGAGAAGCCC GGTCTGATCGCGGGCTGGAGCGAACGCGACCAGATGGAGACCAATCTGGCGATGCTGCAGAACTGCCTGACGCCGCTCAC CGGCGCGGGCAGCGGCCTGCGCCATGTGAGCCTGCTGCAGGGCACCAAGGCCTACGGCATCCACCTGCACCCGATGCCGA TCCCGGCGCGCGAGCGCGCGCCGCGCGATCCCCACGCCAACTTCTACTGGCTGCAGGAGGACTACCTGAAGGAACTGGCG GCGGCGCGGCACTTCGACTTCACCATCCTGCGCCCGCAGCTCATCATCGGCGCGGCCTACGGCGTCGCGATGAACCTCGC ACCGGTGATCGGTGCCTACGCCGCCGTCTGCCGCGAGCTCGGCGAGCCGTTCGGCTTCCCGGGCGGCGTGTCCTATGTGT GGGAAGCGGTCGACGCGCGCCTGCTCGCCAATGTCTTCGTGTGGGCCACCTCCAGCCCGAAGGCGGTCGGCCAGCACTTC AACGTGACCAACGGCGATGTCTTCGAGTGGCGCAACGTGTGGCCGGCGATGGCCGCGACGCTGGGCGTCGAGCCCGGCCC GGACCGGCCCCGCGCGCTGGGGCAGTTCCTGCCCGGGCACGCCGCGGTGTGGGACCGCATCGTGGCGAAGCACGGACTGC GGCCGGTGGCGCTGCCGGCGCTGCTCGGCGAATCGCACCACTACGCGGACTTCTGCTTCGCACACGGCGCGACCGAACCG CCGCCGCCCGCCTTCGTCAGCGCGATCAAGCTGCGCCAGGCGGGCTTCCACGAGGTGTGCGACAGCGAAGACATGTTCTG CCACTGGCTGCGCAGCTTCATGGCGCGCGGCATCCTGCCGCCGGCCTGA
Upstream 100 bases:
>100_bases TTCGATTCGCGCAGGATCGATCCCCTGAACAGCACCGCCACGCGGGCCCAGTTCGGGCGATCGGCGCCCCTTCGAGAACG ACAAGACGCGGAGACATGAG
Downstream 100 bases:
>100_bases GCCCTAGCGAGCGGCCGGCAGCCCCTGCAGGATGCTGCCGCGCACCGGCGCCGCCGTGAGGGTGCGCCGGAGCAGCCGCC AGGACCACGGCTCGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase/Nucleoside-Diphosphate-Sugar Epimerase; Aldo-Keto Reductase Family Protein; Oxidoreductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Short-Chain Dehydrogenase/Reductase Sdr; Short Chain Dehydrogenase Family Protein; NAD Dependent Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MPNKVLIAGASGVVGAAAVDAFLAGGWEVVALSRRRPELTHERPYTHLAVDLRDAAASRAALGALTGITHVVYAALFEKP GLIAGWSERDQMETNLAMLQNCLTPLTGAGSGLRHVSLLQGTKAYGIHLHPMPIPARERAPRDPHANFYWLQEDYLKELA AARHFDFTILRPQLIIGAAYGVAMNLAPVIGAYAAVCRELGEPFGFPGGVSYVWEAVDARLLANVFVWATSSPKAVGQHF NVTNGDVFEWRNVWPAMAATLGVEPGPDRPRALGQFLPGHAAVWDRIVAKHGLRPVALPALLGESHHYADFCFAHGATEP PPPAFVSAIKLRQAGFHEVCDSEDMFCHWLRSFMARGILPPA
Sequences:
>Translated_362_residues MPNKVLIAGASGVVGAAAVDAFLAGGWEVVALSRRRPELTHERPYTHLAVDLRDAAASRAALGALTGITHVVYAALFEKP GLIAGWSERDQMETNLAMLQNCLTPLTGAGSGLRHVSLLQGTKAYGIHLHPMPIPARERAPRDPHANFYWLQEDYLKELA AARHFDFTILRPQLIIGAAYGVAMNLAPVIGAYAAVCRELGEPFGFPGGVSYVWEAVDARLLANVFVWATSSPKAVGQHF NVTNGDVFEWRNVWPAMAATLGVEPGPDRPRALGQFLPGHAAVWDRIVAKHGLRPVALPALLGESHHYADFCFAHGATEP PPPAFVSAIKLRQAGFHEVCDSEDMFCHWLRSFMARGILPPA >Mature_361_residues PNKVLIAGASGVVGAAAVDAFLAGGWEVVALSRRRPELTHERPYTHLAVDLRDAAASRAALGALTGITHVVYAALFEKPG LIAGWSERDQMETNLAMLQNCLTPLTGAGSGLRHVSLLQGTKAYGIHLHPMPIPARERAPRDPHANFYWLQEDYLKELAA ARHFDFTILRPQLIIGAAYGVAMNLAPVIGAYAAVCRELGEPFGFPGGVSYVWEAVDARLLANVFVWATSSPKAVGQHFN VTNGDVFEWRNVWPAMAATLGVEPGPDRPRALGQFLPGHAAVWDRIVAKHGLRPVALPALLGESHHYADFCFAHGATEPP PPAFVSAIKLRQAGFHEVCDSEDMFCHWLRSFMARGILPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39193; Mature: 39062
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKVLIAGASGVVGAAAVDAFLAGGWEVVALSRRRPELTHERPYTHLAVDLRDAAASRA CCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHH ALGALTGITHVVYAALFEKPGLIAGWSERDQMETNLAMLQNCLTPLTGAGSGLRHVSLLQ HHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GTKAYGIHLHPMPIPARERAPRDPHANFYWLQEDYLKELAAARHFDFTILRPQLIIGAAY CCCCCEEEECCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCEEEECHHHHHHHHH GVAMNLAPVIGAYAAVCRELGEPFGFPGGVSYVWEAVDARLLANVFVWATSSPKAVGQHF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHCCC NVTNGDVFEWRNVWPAMAATLGVEPGPDRPRALGQFLPGHAAVWDRIVAKHGLRPVALPA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH LLGESHHYADFCFAHGATEPPPPAFVSAIKLRQAGFHEVCDSEDMFCHWLRSFMARGILP HHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCC PA CC >Mature Secondary Structure PNKVLIAGASGVVGAAAVDAFLAGGWEVVALSRRRPELTHERPYTHLAVDLRDAAASRA CCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHH ALGALTGITHVVYAALFEKPGLIAGWSERDQMETNLAMLQNCLTPLTGAGSGLRHVSLLQ HHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC GTKAYGIHLHPMPIPARERAPRDPHANFYWLQEDYLKELAAARHFDFTILRPQLIIGAAY CCCCCEEEECCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCEEEECHHHHHHHHH GVAMNLAPVIGAYAAVCRELGEPFGFPGGVSYVWEAVDARLLANVFVWATSSPKAVGQHF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHCCC NVTNGDVFEWRNVWPAMAATLGVEPGPDRPRALGQFLPGHAAVWDRIVAKHGLRPVALPA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH LLGESHHYADFCFAHGATEPPPPAFVSAIKLRQAGFHEVCDSEDMFCHWLRSFMARGILP HHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCC PA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA