| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266157
Identifier: 124266157
GI number: 124266157
Start: 1023918
End: 1025627
Strand: Direct
Name: 124266157
Synonym: Mpe_A0964
Alternate gene names: NA
Gene position: 1023918-1025627 (Clockwise)
Preceding gene: 124266156
Following gene: 124266158
Centisome position: 25.32
GC content: 67.66
Gene sequence:
>1710_bases ATGAGAAAGATATCGACATCGGCCTTTGGGCGGTCGTGTGCGGCGTCTCGTGCGCTGGGCACGCGCTGCGTGGCGGCGGC GGCGCTCGCCCTGCCGTTTGGCCTGCCCGGGGGCGCGGCACACGCCTTCGAGATCCGGACCGACAACCCGGACCTCAAGC TCCGCTGGGACAACACCTTCAAGTACAGCAACGCGTTTCGCGTGAAGAGCCAGTCCGAGCGGCTGCTCCAGGACGTCAAC CTCGACGACGGCGACCGCAACTTCGACAAGGGCCTGATCTCGAACCGCATCGACCTGCTGTCCGAGGTCGATGTGGGCTG GAAGAGCCTGGGCTTCCGTGCCAGCGGTGCGGCCTGGTACGACACGGTCTACAACCGCCGCAACGACCACGACTCACCGG CCTCGGCCAACTCCACCAGCGTCGGCCCCGACCGCTTCACCGACGCCACGCGCAAGCTGCACGGGCGCAAGGCCGAGGTG CTCGACTTCTTCGCGTTCGGCAAGACCGATCTCGGCTCGATGCCGCTGACGGTGCGGCTCGGTCGCCACACGCTGATCTA CGGCGAGAGCCTGTTCTTCGGCTCGAACGGCATCGCGGCCGCGCAGGGGCCGGTCGACCTGGTGAAGCTGCTCACCGTGC CGAGTTCGCAGTTCAAGGAGATCCTGCGGCCGGTGGAGCAGATCTCCAGCGTGCTCCAGATCAATTCGCAGATGACGCTG GGCGCGTACTACCAGTTCAAGTTCCGCGAGAGCATCATCCCGGCCGCCGGCAGCTACCTCAGCGCCTTCGACTTCGTCGG CGACGGCGCCGAGCGCTTCATCGTCGGCGCCCCCATCACCCCTGGCGGCGGCGCGGCGGCATTCTGGCGCGGCGCCGACA TCGAGGCCAGGAACTCGGGGCAGGGCGGCCTGCAGTTCCGCTGGGCCCCGACCGGGAGCGAATGGGAGTTCGGCGTCTAC GCGGCGCGCTACCACGACAAGGGTGCCGCGCTGTATCTCACGCCGTCGGCCGCGCCCGACGTGGTGAGCGGCCGGGTCGG CGCGATCCAGCAGGTCTACCACGAGGGCATCAAGACCTACGGCGCCAGCGCGACCACCTCGATCGGCCAGCTCAACCTGG CCTTCGAGGGCTCGATCCGCCGCAACGCCTCGCTGGTGAGCGACCCGCAGGTGGTGCTGCCGGGCGTGCTCGCCGACAAC GACGCCCATCCGCTCTACGCCGTCGGCAACACGGCGCATGCGCAGGTGTCGGGCATCTACGTGCTGTCGGAGACGCGGCT GTGGGATGCCGGCGCCTTCCTCGGCGAGGTGGCGTGGAACCGCCGGCTGAGCATCGACAAGAACCCGGGGGCGCTCGATC CCAACACCACGCGCGATGCCGCGGCGCTGCGCTTCATCTTCGAGCCTTCGTACTTCCAGGTGGTCGACGGCGTCGACCTC TCGCTGCCGATCGGCGTGGGCTACAACTTCTACGGCCGCTCGTCGTCGATCTTCAACTTCAACGGCGGCAGCTCCAAGGG CGGTGACTTCTCGATCGGCGTGAAGGCGACCTACCGCACGGTCTGGCAGGCCGGACTCACCTACACCGGCTTCTATGGCG GCGAGGACACCTTCCTCACGCCGGCCAACTCGCCCACGCCGGTGCTCTCCTACAAGCAGTTCTACAAGGACCGCAACTTC ATTTCCTTCTCGCTGCAGCGTGCCCTTTGA
Upstream 100 bases:
>100_bases CTGCGGCATGGCATCGCGTTTGCAATCCCGGCCTCCACGCACCGGACGAAGTGCGGCGGTGATGCGTCAGTCAACAACAC CCATCGACAACGGAGACAAG
Downstream 100 bases:
>100_bases TGGAGACCGGCATGAACAAGACCCCCAAGATTTCGTTCGCCGTCGCGCTCGCGCTGGCATCCCTCGCCGCGCAGCCGGTG CTCGCTGCGGTGAGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MRKISTSAFGRSCAASRALGTRCVAAAALALPFGLPGGAAHAFEIRTDNPDLKLRWDNTFKYSNAFRVKSQSERLLQDVN LDDGDRNFDKGLISNRIDLLSEVDVGWKSLGFRASGAAWYDTVYNRRNDHDSPASANSTSVGPDRFTDATRKLHGRKAEV LDFFAFGKTDLGSMPLTVRLGRHTLIYGESLFFGSNGIAAAQGPVDLVKLLTVPSSQFKEILRPVEQISSVLQINSQMTL GAYYQFKFRESIIPAAGSYLSAFDFVGDGAERFIVGAPITPGGGAAAFWRGADIEARNSGQGGLQFRWAPTGSEWEFGVY AARYHDKGAALYLTPSAAPDVVSGRVGAIQQVYHEGIKTYGASATTSIGQLNLAFEGSIRRNASLVSDPQVVLPGVLADN DAHPLYAVGNTAHAQVSGIYVLSETRLWDAGAFLGEVAWNRRLSIDKNPGALDPNTTRDAAALRFIFEPSYFQVVDGVDL SLPIGVGYNFYGRSSSIFNFNGGSSKGGDFSIGVKATYRTVWQAGLTYTGFYGGEDTFLTPANSPTPVLSYKQFYKDRNF ISFSLQRAL
Sequences:
>Translated_569_residues MRKISTSAFGRSCAASRALGTRCVAAAALALPFGLPGGAAHAFEIRTDNPDLKLRWDNTFKYSNAFRVKSQSERLLQDVN LDDGDRNFDKGLISNRIDLLSEVDVGWKSLGFRASGAAWYDTVYNRRNDHDSPASANSTSVGPDRFTDATRKLHGRKAEV LDFFAFGKTDLGSMPLTVRLGRHTLIYGESLFFGSNGIAAAQGPVDLVKLLTVPSSQFKEILRPVEQISSVLQINSQMTL GAYYQFKFRESIIPAAGSYLSAFDFVGDGAERFIVGAPITPGGGAAAFWRGADIEARNSGQGGLQFRWAPTGSEWEFGVY AARYHDKGAALYLTPSAAPDVVSGRVGAIQQVYHEGIKTYGASATTSIGQLNLAFEGSIRRNASLVSDPQVVLPGVLADN DAHPLYAVGNTAHAQVSGIYVLSETRLWDAGAFLGEVAWNRRLSIDKNPGALDPNTTRDAAALRFIFEPSYFQVVDGVDL SLPIGVGYNFYGRSSSIFNFNGGSSKGGDFSIGVKATYRTVWQAGLTYTGFYGGEDTFLTPANSPTPVLSYKQFYKDRNF ISFSLQRAL >Mature_569_residues MRKISTSAFGRSCAASRALGTRCVAAAALALPFGLPGGAAHAFEIRTDNPDLKLRWDNTFKYSNAFRVKSQSERLLQDVN LDDGDRNFDKGLISNRIDLLSEVDVGWKSLGFRASGAAWYDTVYNRRNDHDSPASANSTSVGPDRFTDATRKLHGRKAEV LDFFAFGKTDLGSMPLTVRLGRHTLIYGESLFFGSNGIAAAQGPVDLVKLLTVPSSQFKEILRPVEQISSVLQINSQMTL GAYYQFKFRESIIPAAGSYLSAFDFVGDGAERFIVGAPITPGGGAAAFWRGADIEARNSGQGGLQFRWAPTGSEWEFGVY AARYHDKGAALYLTPSAAPDVVSGRVGAIQQVYHEGIKTYGASATTSIGQLNLAFEGSIRRNASLVSDPQVVLPGVLADN DAHPLYAVGNTAHAQVSGIYVLSETRLWDAGAFLGEVAWNRRLSIDKNPGALDPNTTRDAAALRFIFEPSYFQVVDGVDL SLPIGVGYNFYGRSSSIFNFNGGSSKGGDFSIGVKATYRTVWQAGLTYTGFYGGEDTFLTPANSPTPVLSYKQFYKDRNF ISFSLQRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61621; Mature: 61621
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKISTSAFGRSCAASRALGTRCVAAAALALPFGLPGGAAHAFEIRTDNPDLKLRWDNTF CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCE KYSNAFRVKSQSERLLQDVNLDDGDRNFDKGLISNRIDLLSEVDVGWKSLGFRASGAAWY EECCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHH DTVYNRRNDHDSPASANSTSVGPDRFTDATRKLHGRKAEVLDFFAFGKTDLGSMPLTVRL HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEE GRHTLIYGESLFFGSNGIAAAQGPVDLVKLLTVPSSQFKEILRPVEQISSVLQINSQMTL CCEEEEEECEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE GAYYQFKFRESIIPAAGSYLSAFDFVGDGAERFIVGAPITPGGGAAAFWRGADIEARNSG EEEEEEEEHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCC QGGLQFRWAPTGSEWEFGVYAARYHDKGAALYLTPSAAPDVVSGRVGAIQQVYHEGIKTY CCCEEEEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHC GASATTSIGQLNLAFEGSIRRNASLVSDPQVVLPGVLADNDAHPLYAVGNTAHAQVSGIY CCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEECCCCCCEEEECCCCEEEEEEEE VLSETRLWDAGAFLGEVAWNRRLSIDKNPGALDPNTTRDAAALRFIFEPSYFQVVDGVDL EEECCEEECCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCE SLPIGVGYNFYGRSSSIFNFNGGSSKGGDFSIGVKATYRTVWQAGLTYTGFYGGEDTFLT EEEEECCEEEECCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHCCCEEEEEECCCCCEEC PANSPTPVLSYKQFYKDRNFISFSLQRAL CCCCCCCCHHHHHHHCCCCEEEEEEECCC >Mature Secondary Structure MRKISTSAFGRSCAASRALGTRCVAAAALALPFGLPGGAAHAFEIRTDNPDLKLRWDNTF CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCE KYSNAFRVKSQSERLLQDVNLDDGDRNFDKGLISNRIDLLSEVDVGWKSLGFRASGAAWY EECCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHH DTVYNRRNDHDSPASANSTSVGPDRFTDATRKLHGRKAEVLDFFAFGKTDLGSMPLTVRL HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEE GRHTLIYGESLFFGSNGIAAAQGPVDLVKLLTVPSSQFKEILRPVEQISSVLQINSQMTL CCEEEEEECEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE GAYYQFKFRESIIPAAGSYLSAFDFVGDGAERFIVGAPITPGGGAAAFWRGADIEARNSG EEEEEEEEHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCC QGGLQFRWAPTGSEWEFGVYAARYHDKGAALYLTPSAAPDVVSGRVGAIQQVYHEGIKTY CCCEEEEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHHC GASATTSIGQLNLAFEGSIRRNASLVSDPQVVLPGVLADNDAHPLYAVGNTAHAQVSGIY CCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCEEECCCCCCEEEECCCCEEEEEEEE VLSETRLWDAGAFLGEVAWNRRLSIDKNPGALDPNTTRDAAALRFIFEPSYFQVVDGVDL EEECCEEECCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCE SLPIGVGYNFYGRSSSIFNFNGGSSKGGDFSIGVKATYRTVWQAGLTYTGFYGGEDTFLT EEEEECCEEEECCCCCEEEECCCCCCCCCEEEEEEHHHHHHHHCCCEEEEEECCCCCEEC PANSPTPVLSYKQFYKDRNFISFSLQRAL CCCCCCCCHHHHHHHCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA