| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is prmB [H]
Identifier: 124266144
GI number: 124266144
Start: 1007608
End: 1008669
Strand: Direct
Name: prmB [H]
Synonym: Mpe_A0951
Alternate gene names: 124266144
Gene position: 1007608-1008669 (Clockwise)
Preceding gene: 124266143
Following gene: 124266145
Centisome position: 24.91
GC content: 66.85
Gene sequence:
>1062_bases ATGTCTGCAAAAACAGTCCACACCGTTCGTTTCGAGCCGGTCGGCGTCGAGATGGAGGTGGAAGAGGGGGAGTGGGTCCT GGATGCGGCGTTCCGGCAGGGCATCGCCCTGCCTCACGGTTGCCGTGAAGGCCGCTGCAGCAGTTGCAAGTGCGTGGTGC TGGACGGCGACGCCGAGGTCGAGGGCCATTCCACGTTCGCGCTGCCCGACCACGAGCGCGACGGCGGCCAGGTGCTGCTG TGCAGAACCTATGCCTACAGCGACCTCACGGTCGAACTGCTGAACTACGACGAGGACGCGATGCGTCGCTCGATCGCGAT CAAGACCTTCGAAGGCGAGCTGGTGTCGGTGAGTTCGCTGACGCACGACATCCGCATGCTGGAGATCAAGGTCGAGCAGC CGATCCGGTTCTGGGCCGGCCAGTTCGTGGAGCTCAGCGTGCCGCATGCCGGTGTCACGCGCTCCTACTCGATGGCCAGT ACGCAGAGCTCGCCGGACACGGTGCGCTTCATCATCCGCAAGTACCCGGAGGGCGCGTTCTCTTCGCTGCTCGACGGTGA CCTGAAGCCCGGCACGCCGGTCACGCTGAAGGGCCCGTACGGCAGCTGCTTCCGCCGCGAGGAGCGCCCGGGTCCGATGG TGCTGGTGGGCGGCGGCTCCGGCATGTCGCCGCTGTGGTCGATCCTGCAGGATCACATCGAGAGCGGCGAACAGCGGCCG ATCCGCTTCTACTACGGCGCCCGCACGCGCAAGGACCTGTTCTTCGTCGAGGAATTCGCGGCCATCGCCGCCAAGCTCCC CGACTTCGAATTCATCCCCGTGCTGTCGCAGGCCACCGAGGAAGACGCCTGGCAGGGCGAGACCGGCTTCGTGCACGAGG CCGTCGAGCGCATCCAGCGTGCGCGTCCCCAGCCCGGCGAGGTCGATGCCTACACCTGTGGCCCGCCGCCGATGGTCGAT GCCCTGCTGCCGGTCCTGCAGCGCCTCGGCGTCGCGCTGGACCGCACCTATGTCGACAAGTTCACCCAGGCCAGCGCCAG CGCACCCAACCACGTTCATTGA
Upstream 100 bases:
>100_bases CCTACCGCGCCGGCTTCAAGATCAAGCCGTTCTGACGCGGTTCTCAGTGGTCCCGGGCGGCGGTGCCGCCCGGGGCGGAC CAGATTATTCGGGGACAGAC
Downstream 100 bases:
>100_bases TCAGGAGAGAGACATGAGCCAAGCCACCAACAACACGACGCCCGACACCCCGTCGACCGCGACGGGCGCCGCCGGTTCCG CGCGCTTCGCGGGCTGGGAC
Product: propane monoxygenase reductase
Products: NA
Alternate protein names: Phenol 2-monooxygenase P5 component [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSAKTVHTVRFEPVGVEMEVEEGEWVLDAAFRQGIALPHGCREGRCSSCKCVVLDGDAEVEGHSTFALPDHERDGGQVLL CRTYAYSDLTVELLNYDEDAMRRSIAIKTFEGELVSVSSLTHDIRMLEIKVEQPIRFWAGQFVELSVPHAGVTRSYSMAS TQSSPDTVRFIIRKYPEGAFSSLLDGDLKPGTPVTLKGPYGSCFRREERPGPMVLVGGGSGMSPLWSILQDHIESGEQRP IRFYYGARTRKDLFFVEEFAAIAAKLPDFEFIPVLSQATEEDAWQGETGFVHEAVERIQRARPQPGEVDAYTCGPPPMVD ALLPVLQRLGVALDRTYVDKFTQASASAPNHVH
Sequences:
>Translated_353_residues MSAKTVHTVRFEPVGVEMEVEEGEWVLDAAFRQGIALPHGCREGRCSSCKCVVLDGDAEVEGHSTFALPDHERDGGQVLL CRTYAYSDLTVELLNYDEDAMRRSIAIKTFEGELVSVSSLTHDIRMLEIKVEQPIRFWAGQFVELSVPHAGVTRSYSMAS TQSSPDTVRFIIRKYPEGAFSSLLDGDLKPGTPVTLKGPYGSCFRREERPGPMVLVGGGSGMSPLWSILQDHIESGEQRP IRFYYGARTRKDLFFVEEFAAIAAKLPDFEFIPVLSQATEEDAWQGETGFVHEAVERIQRARPQPGEVDAYTCGPPPMVD ALLPVLQRLGVALDRTYVDKFTQASASAPNHVH >Mature_352_residues SAKTVHTVRFEPVGVEMEVEEGEWVLDAAFRQGIALPHGCREGRCSSCKCVVLDGDAEVEGHSTFALPDHERDGGQVLLC RTYAYSDLTVELLNYDEDAMRRSIAIKTFEGELVSVSSLTHDIRMLEIKVEQPIRFWAGQFVELSVPHAGVTRSYSMAST QSSPDTVRFIIRKYPEGAFSSLLDGDLKPGTPVTLKGPYGSCFRREERPGPMVLVGGGSGMSPLWSILQDHIESGEQRPI RFYYGARTRKDLFFVEEFAAIAAKLPDFEFIPVLSQATEEDAWQGETGFVHEAVERIQRARPQPGEVDAYTCGPPPMVDA LLPVLQRLGVALDRTYVDKFTQASASAPNHVH
Specific function: Probable electron transfer from NADPH, via FAD and the 2Fe-2S center, to the oxygenase activity site of the enzyme [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI2367314, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322699, Length=272, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6322146, Length=217, Percent_Identity=23.963133640553, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323510, Length=202, Percent_Identity=26.7326732673267, Blast_Score=73, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323552, Length=190, Percent_Identity=25.2631578947368, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.14.13.7 [H]
Molecular weight: Translated: 39126; Mature: 38994
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKTVHTVRFEPVGVEMEVEEGEWVLDAAFRQGIALPHGCREGRCSSCKCVVLDGDAEV CCCCEEEEEEECCCCEEEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC EGHSTFALPDHERDGGQVLLCRTYAYSDLTVELLNYDEDAMRRSIAIKTFEGELVSVSSL CCCEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHEEEEEEECCCEEEHHHH THDIRMLEIKVEQPIRFWAGQFVELSVPHAGVTRSYSMASTQSSPDTVRFIIRKYPEGAF HCCEEEEEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH SSLLDGDLKPGTPVTLKGPYGSCFRREERPGPMVLVGGGSGMSPLWSILQDHIESGEQRP HHHHCCCCCCCCCEEEECCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC IRFYYGARTRKDLFFVEEFAAIAAKLPDFEFIPVLSQATEEDAWQGETGFVHEAVERIQR EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHCCCCCCCHHHHHHHHHHH ARPQPGEVDAYTCGPPPMVDALLPVLQRLGVALDRTYVDKFTQASASAPNHVH CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAKTVHTVRFEPVGVEMEVEEGEWVLDAAFRQGIALPHGCREGRCSSCKCVVLDGDAEV CCCEEEEEEECCCCEEEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC EGHSTFALPDHERDGGQVLLCRTYAYSDLTVELLNYDEDAMRRSIAIKTFEGELVSVSSL CCCEEEECCCCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHEEEEEEECCCEEEHHHH THDIRMLEIKVEQPIRFWAGQFVELSVPHAGVTRSYSMASTQSSPDTVRFIIRKYPEGAF HCCEEEEEEEECCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH SSLLDGDLKPGTPVTLKGPYGSCFRREERPGPMVLVGGGSGMSPLWSILQDHIESGEQRP HHHHCCCCCCCCCEEEECCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCC IRFYYGARTRKDLFFVEEFAAIAAKLPDFEFIPVLSQATEEDAWQGETGFVHEAVERIQR EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHCCHHHCCCCCCCHHHHHHHHHHH ARPQPGEVDAYTCGPPPMVDALLPVLQRLGVALDRTYVDKFTQASASAPNHVH CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254258; 2254259 [H]