| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is prmA [H]
Identifier: 124266143
GI number: 124266143
Start: 1005875
End: 1007542
Strand: Direct
Name: prmA [H]
Synonym: Mpe_A0950
Alternate gene names: 124266143
Gene position: 1005875-1007542 (Clockwise)
Preceding gene: 124266142
Following gene: 124266144
Centisome position: 24.87
GC content: 64.81
Gene sequence:
>1668_bases ATGTCAGCAGGTTTGACGCTCAACAAGATCACGTCCCAGAAAGGGATCAGCGTGGCCGAGGCGGCTCGGCGCATCGCCGA CCTCGGATGGCAGCCCAGCTATGTCCAGGAAGCGATGACCTTCCCGACCGATTACAAGATCGGCAAGGCCCCGCGCGACC CGATGAAGCAGGTGCTGCGCTCCTACTTCCCGATGCAGGAGGAGAAGGACAACCGCGTGTACGGCGCGCTCGACGCGGCG CTGCGCGGCGACATGTTCCGCAACACCAAGCCGCGCTGGGTCGAGTGGATGAAGCTGTTCCTGGCGATCATCCCCTTCCC CGAGATCTCGGCGGCACGCTCGATGTCCATGCTCGGCCGCCTCGCCCCGGGCGAGGAGCTGCGCACCGGCTTCACGATGC AGATGGTCGACGAGTTCCGCCATTCCACGATTCAGATGAACCTGAAGAAGTGGTACATGGAGAACTACATCGACCCGGCC GGCTTCGACATCACCGAGGCCGCGTTCGGCAAGTGCTACGCCACCACCATCGGCCGCCAGTTCGCCGAAGGCTTCCTGAC CGGTGACGCGCTGACGGCCGCGAACATCTACCTGCAGGTCGTCGCCGAGACCGGCTTCACCAACACGCTGTTCGTCGCGA TGCCGTCGGAAGCTGCCCGCAACGGCGACTACGCGCTGTCGTCGGTGTTCCTGTCGGTGCAGTCGGACGAGTCGCGCCAC ATCGGCAACGGCCACTCGCTGCTGATGTCGGTGGTCAACGACCCCGACAACCACCTGCTGCTCGAGCGCGACATCCGCTA CGCGTTCTGGCAGAACCACGCGATCGTCGACGCCGCCATCGGCACGATCATCGAGTACGGCACCACCGACCGCAGCAAGA ACAAGGAGTCCTACGCCGAGCTCTGGCACCGCTGGATCTACGAGGACTACTACCGCACCTACCTGCTCCCGCTCGAGAAG TACGGCGTCAAGATCCACCACGACGACGTCTCCGCCGCGTGGGACCGCCTGGTCAAGAAGAACTACGTGCACAAGGTCGC GCAGTTCTTCGCGGTCGGCTGGCCCGCCAACTTCTGGCGCATCGAAGCCCAGACCGAGAAGGACTTCGAGTGGTTCGAGC ACAAGTACCCGGGCTGGTACGCCGAGTTCGGCGATTTCTGGAAGTGGTACGAGCGCAAGAGCGTGCCGGGCGAGACCAAC ATGCTGTTCGACCAGGAGAACGGCTACGTCTACCCGCACCGCTGCTGGAGCTGCATGGTGCCGGCGGTGATCCGTGAGGA GCTGGTGGTCGACGAGGTCGACGGCAAGCTCTACACCTACTGCTCCGAGCTGTGCCGCTGGACCCACAAGACGGCCTTCG CCGCCGAGTACGAGGGCCGCCCGACGCCGGCGATGGGCCGCTTCAGCGGTCGCCGCGAATGGGAAGAGTGCTACCACGGC TGGGACCTGGCCGACGCGATCAAGGACCTCGGCTTCGTCCGCTCGGACGGCAAGACGCTGGTCTCGCAGCCCCACCTGCG CTTCGACGACAAGCACATGTGGACGCTGGATCACGTGCGGGGCCACCAGCTCCAGAGCCCGCTCGTGCTTCTGCGCGAGA TGACGCCCGAGGCGCGTGAGAAGCACATCGCCTCCTACCGCGCCGGCTTCAAGATCAAGCCGTTCTGA
Upstream 100 bases:
>100_bases AGAGGAGGGGCCCTGGCCCAAGGACAGGTCGGCGGCACGACCGCGCGGCCTCGACGCACAGCAAACCGGTCCGAACGGAT CAGCAGTAAAGGAGACCTTC
Downstream 100 bases:
>100_bases CGCGGTTCTCAGTGGTCCCGGGCGGCGGTGCCGCCCGGGGCGGACCAGATTATTCGGGGACAGACATGTCTGCAAAAACA GTCCACACCGTTCGTTTCGA
Product: propane monoxygenase hydroxylase large subunit
Products: NA
Alternate protein names: Methane hydroxylase [H]
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSAGLTLNKITSQKGISVAEAARRIADLGWQPSYVQEAMTFPTDYKIGKAPRDPMKQVLRSYFPMQEEKDNRVYGALDAA LRGDMFRNTKPRWVEWMKLFLAIIPFPEISAARSMSMLGRLAPGEELRTGFTMQMVDEFRHSTIQMNLKKWYMENYIDPA GFDITEAAFGKCYATTIGRQFAEGFLTGDALTAANIYLQVVAETGFTNTLFVAMPSEAARNGDYALSSVFLSVQSDESRH IGNGHSLLMSVVNDPDNHLLLERDIRYAFWQNHAIVDAAIGTIIEYGTTDRSKNKESYAELWHRWIYEDYYRTYLLPLEK YGVKIHHDDVSAAWDRLVKKNYVHKVAQFFAVGWPANFWRIEAQTEKDFEWFEHKYPGWYAEFGDFWKWYERKSVPGETN MLFDQENGYVYPHRCWSCMVPAVIREELVVDEVDGKLYTYCSELCRWTHKTAFAAEYEGRPTPAMGRFSGRREWEECYHG WDLADAIKDLGFVRSDGKTLVSQPHLRFDDKHMWTLDHVRGHQLQSPLVLLREMTPEAREKHIASYRAGFKIKPF
Sequences:
>Translated_555_residues MSAGLTLNKITSQKGISVAEAARRIADLGWQPSYVQEAMTFPTDYKIGKAPRDPMKQVLRSYFPMQEEKDNRVYGALDAA LRGDMFRNTKPRWVEWMKLFLAIIPFPEISAARSMSMLGRLAPGEELRTGFTMQMVDEFRHSTIQMNLKKWYMENYIDPA GFDITEAAFGKCYATTIGRQFAEGFLTGDALTAANIYLQVVAETGFTNTLFVAMPSEAARNGDYALSSVFLSVQSDESRH IGNGHSLLMSVVNDPDNHLLLERDIRYAFWQNHAIVDAAIGTIIEYGTTDRSKNKESYAELWHRWIYEDYYRTYLLPLEK YGVKIHHDDVSAAWDRLVKKNYVHKVAQFFAVGWPANFWRIEAQTEKDFEWFEHKYPGWYAEFGDFWKWYERKSVPGETN MLFDQENGYVYPHRCWSCMVPAVIREELVVDEVDGKLYTYCSELCRWTHKTAFAAEYEGRPTPAMGRFSGRREWEECYHG WDLADAIKDLGFVRSDGKTLVSQPHLRFDDKHMWTLDHVRGHQLQSPLVLLREMTPEAREKHIASYRAGFKIKPF >Mature_554_residues SAGLTLNKITSQKGISVAEAARRIADLGWQPSYVQEAMTFPTDYKIGKAPRDPMKQVLRSYFPMQEEKDNRVYGALDAAL RGDMFRNTKPRWVEWMKLFLAIIPFPEISAARSMSMLGRLAPGEELRTGFTMQMVDEFRHSTIQMNLKKWYMENYIDPAG FDITEAAFGKCYATTIGRQFAEGFLTGDALTAANIYLQVVAETGFTNTLFVAMPSEAARNGDYALSSVFLSVQSDESRHI GNGHSLLMSVVNDPDNHLLLERDIRYAFWQNHAIVDAAIGTIIEYGTTDRSKNKESYAELWHRWIYEDYYRTYLLPLEKY GVKIHHDDVSAAWDRLVKKNYVHKVAQFFAVGWPANFWRIEAQTEKDFEWFEHKYPGWYAEFGDFWKWYERKSVPGETNM LFDQENGYVYPHRCWSCMVPAVIREELVVDEVDGKLYTYCSELCRWTHKTAFAAEYEGRPTPAMGRFSGRREWEECYHGW DLADAIKDLGFVRSDGKTLVSQPHLRFDDKHMWTLDHVRGHQLQSPLVLLREMTPEAREKHIASYRAGFKIKPF
Specific function: Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009078 - InterPro: IPR003430 - InterPro: IPR012348 [H]
Pfam domain/function: PF02332 Phenol_Hydrox [H]
EC number: =1.14.13.25 [H]
Molecular weight: Translated: 64374; Mature: 64242
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGLTLNKITSQKGISVAEAARRIADLGWQPSYVQEAMTFPTDYKIGKAPRDPMKQVLR CCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SYFPMQEEKDNRVYGALDAALRGDMFRNTKPRWVEWMKLFLAIIPFPEISAARSMSMLGR HHCCCCCCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC LAPGEELRTGFTMQMVDEFRHSTIQMNLKKWYMENYIDPAGFDITEAAFGKCYATTIGRQ CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FAEGFLTGDALTAANIYLQVVAETGFTNTLFVAMPSEAARNGDYALSSVFLSVQSDESRH HHHHHCCCCHHHHHHHHEEEEECCCCCCEEEEEECCHHHCCCCCEEEHHEEEEECCCCCC IGNGHSLLMSVVNDPDNHLLLERDIRYAFWQNHAIVDAAIGTIIEYGTTDRSKNKESYAE CCCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH LWHRWIYEDYYRTYLLPLEKYGVKIHHDDVSAAWDRLVKKNYVHKVAQFFAVGWPANFWR HHHHHHHHHHHHHHHEEHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IEAQTEKDFEWFEHKYPGWYAEFGDFWKWYERKSVPGETNMLFDQENGYVYPHRCWSCMV EECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEECHHHHHHHHH PAVIREELVVDEVDGKLYTYCSELCRWTHKTAFAAEYEGRPTPAMGRFSGRREWEECYHG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCC WDLADAIKDLGFVRSDGKTLVSQPHLRFDDKHMWTLDHVRGHQLQSPLVLLREMTPEARE CCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEHHHCCCCCCCHHHHHHHCCHHHHH KHIASYRAGFKIKPF HHHHHHHCCCEECCC >Mature Secondary Structure SAGLTLNKITSQKGISVAEAARRIADLGWQPSYVQEAMTFPTDYKIGKAPRDPMKQVLR CCCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SYFPMQEEKDNRVYGALDAALRGDMFRNTKPRWVEWMKLFLAIIPFPEISAARSMSMLGR HHCCCCCCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC LAPGEELRTGFTMQMVDEFRHSTIQMNLKKWYMENYIDPAGFDITEAAFGKCYATTIGRQ CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH FAEGFLTGDALTAANIYLQVVAETGFTNTLFVAMPSEAARNGDYALSSVFLSVQSDESRH HHHHHCCCCHHHHHHHHEEEEECCCCCCEEEEEECCHHHCCCCCEEEHHEEEEECCCCCC IGNGHSLLMSVVNDPDNHLLLERDIRYAFWQNHAIVDAAIGTIIEYGTTDRSKNKESYAE CCCHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH LWHRWIYEDYYRTYLLPLEKYGVKIHHDDVSAAWDRLVKKNYVHKVAQFFAVGWPANFWR HHHHHHHHHHHHHHHEEHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IEAQTEKDFEWFEHKYPGWYAEFGDFWKWYERKSVPGETNMLFDQENGYVYPHRCWSCMV EECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEECHHHHHHHHH PAVIREELVVDEVDGKLYTYCSELCRWTHKTAFAAEYEGRPTPAMGRFSGRREWEECYHG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHCC WDLADAIKDLGFVRSDGKTLVSQPHLRFDDKHMWTLDHVRGHQLQSPLVLLREMTPEARE CCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEHHHCCCCCCCHHHHHHHCCHHHHH KHIASYRAGFKIKPF HHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2205538; 8255292; 9432288; 9329079; 11456616 [H]