| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is tauC [C]
Identifier: 124266117
GI number: 124266117
Start: 980843
End: 981619
Strand: Direct
Name: tauC [C]
Synonym: Mpe_A0924
Alternate gene names: 124266117
Gene position: 980843-981619 (Clockwise)
Preceding gene: 124266116
Following gene: 124266118
Centisome position: 24.25
GC content: 64.99
Gene sequence:
>777_bases ATGATGCTGGCCGGCTACGCCATGCTGCTGGGCTTCTGGTACTTCACGGTCGAGGTCTGGAAGCTGCCGCGCTTTCGGGA CATGCCGGGCCTGACGACGGTGTTCACCGAGATGTTCAACCGCCATCCGGTGTACGGGCTCTCGATCTACACGCCGGAGT ACTACGACCACATCTGGGCCAGCGTGCGGCGGGTCGCCACCGCCTTCTTCCTGGCCACCGGGCTGGGCGTGCCGCTCGGG CTCTTTCTCGGCTGGTCGAAGTCCTTCCGCGAGTACGTGTTCCCGATCTTCGAGACGCTGCGGCCGATCCCCATCCTGGC GTGGGTGCCGCTGGCGATCCTGATGTTCTCGGGCACCGAGACGCCGGTGATCTTCCTGACCTTCCTGGCCTCGTTCTTCG CCACGGCGCTCAACACCATGCTCGGCGTCGAGTCGATCGACGAGTCCTACAGCCGCGCAGCCTACTGCCTGGGCGCGAGC AAGTGGCAGGTGTTCCGCGAGGTCATCGTGCCGGGTTCCATGCCCTACATCTTCACGGGGCTGCAGATCTCGGTCGGGGT CGCGTGGTTCTCGCTGGTGGCCGGCGAGATGGTCTCTGGCGAGTTCGGCCTGGGCTATGTGATCAACACCTCGTACACGA TGGTGCAGTACCCGACGATCGTGATCGGCATGGTCACGCTCGGTGCGGTGGGCTACGTGACCAGCGCCATGGTGCGTGTG GTGGGCGACATGATGATGCAGTGGCGCGTGCGCGAGCTGGCGTTGGGAGGACGCTGA
Upstream 100 bases:
>100_bases CGCAGCCGACTCCGGCGCGGCGCAGGGCGGTAGCGGCGGCGACGGCTGGGCGCGCACGATGTTCCGCCTCTCGCAGTGGC TCAAGAGCCCCAAGCCCTAC
Downstream 100 bases:
>100_bases GATGAACACCACCCAGGAAAGACAGCGGCAGTCCGGCGGCCGGGCCGCCACGCAGGGCGCGATCCGCATCGACGATGTCG TCAAGGTCTACGACCCCGAC
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MMLAGYAMLLGFWYFTVEVWKLPRFRDMPGLTTVFTEMFNRHPVYGLSIYTPEYYDHIWASVRRVATAFFLATGLGVPLG LFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGAS KWQVFREVIVPGSMPYIFTGLQISVGVAWFSLVAGEMVSGEFGLGYVINTSYTMVQYPTIVIGMVTLGAVGYVTSAMVRV VGDMMMQWRVRELALGGR
Sequences:
>Translated_258_residues MMLAGYAMLLGFWYFTVEVWKLPRFRDMPGLTTVFTEMFNRHPVYGLSIYTPEYYDHIWASVRRVATAFFLATGLGVPLG LFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGAS KWQVFREVIVPGSMPYIFTGLQISVGVAWFSLVAGEMVSGEFGLGYVINTSYTMVQYPTIVIGMVTLGAVGYVTSAMVRV VGDMMMQWRVRELALGGR >Mature_258_residues MMLAGYAMLLGFWYFTVEVWKLPRFRDMPGLTTVFTEMFNRHPVYGLSIYTPEYYDHIWASVRRVATAFFLATGLGVPLG LFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTETPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGAS KWQVFREVIVPGSMPYIFTGLQISVGVAWFSLVAGEMVSGEFGLGYVINTSYTMVQYPTIVIGMVTLGAVGYVTSAMVRV VGDMMMQWRVRELALGGR
Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=157, Percent_Identity=40.7643312101911, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI87081802, Length=153, Percent_Identity=28.7581699346405, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28960; Mature: 28960
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLAGYAMLLGFWYFTVEVWKLPRFRDMPGLTTVFTEMFNRHPVYGLSIYTPEYYDHIWA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHH SVRRVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTE HHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC TPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGASKWQVFREVIVPGSMPYIFTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEC LQISVGVAWFSLVAGEMVSGEFGLGYVINTSYTMVQYPTIVIGMVTLGAVGYVTSAMVRV HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH VGDMMMQWRVRELALGGR HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMLAGYAMLLGFWYFTVEVWKLPRFRDMPGLTTVFTEMFNRHPVYGLSIYTPEYYDHIWA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHH SVRRVATAFFLATGLGVPLGLFLGWSKSFREYVFPIFETLRPIPILAWVPLAILMFSGTE HHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC TPVIFLTFLASFFATALNTMLGVESIDESYSRAAYCLGASKWQVFREVIVPGSMPYIFTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEC LQISVGVAWFSLVAGEMVSGEFGLGYVINTSYTMVQYPTIVIGMVTLGAVGYVTSAMVRV HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH VGDMMMQWRVRELALGGR HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA