| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is tauA [C]
Identifier: 124266116
GI number: 124266116
Start: 979043
End: 980188
Strand: Direct
Name: tauA [C]
Synonym: Mpe_A0923
Alternate gene names: 124266116
Gene position: 979043-980188 (Clockwise)
Preceding gene: 124266115
Following gene: 124266117
Centisome position: 24.21
GC content: 66.75
Gene sequence:
>1146_bases ATGACGTTCTGGATGAATCAGCGTGTACGCGCGGCCGCCGCAGCGATGGCGGTGGCTTGCGGCCTCGGCATCGGGGCTCC TTCGACGGCGCTCGCCGCCGATCTCGACTACGGCAAGCCGGGTGATCCGGTCCAACTGGTGATCGGCTACCAGCCGTACT ACACCCAGTCGTGGTCCGGCGTGGTCATGCGGGGCAAGAAGTTCTACGAGAAGTACCTGCCCAAGGGCTCCACGGTCGAC TTCTCGATCGGCCTGCAGGGCGCGGTGATCGTCAACGCCATGCTGGCCGGCAAGCAGCACATCGGCTACATGGGCGACAT GCCGGCGATCGTCTCGACCACCAAGGAATCGGTGGCGGACATCCGCATCGTCGCGACGCTCGGCGTCGGCTTCGACCAGT GCAACATCCTGCTGGCTCGCAACGACGCGCCCAAGTTCGGCAACGGCAAGGAAGGCGTCAAGTGGCTCGAGGGCAAGCGC ATCGGCATCCCGCTGGGCAGCTGCGCCGACCGTTTCGCGAAGGAGGCCTTCCGCAAGGAGGGGGTCGCGCCGGCGGCCAT AATGAACCAGAACATCGAGGTCATCACCAGCGGCTTCCGCGCCGGCAAGCTCGATGCCGCGGCGATCTGGGAGCCCACCG CCTCGCGGCTGGTGGAGGAGGGGCTGGCGCGGCGCATCGCCAGCGGCGCGACGGTCAACGAGAAGGACGCCGGCTTCCTG GCCATGCGGGCCGACCTGATCAAGCAGCGTCCCGACGTCGCCAAGGCCTGGCTGAACGCCGAGCTCGACGCCCAGCTGTT CCTCGCCGACCCGAAGAACGCGATGGAGGTGGCGGCGATGGCCGCGCAGCAGGCGACCGGCTTCACCGAGAAGATGCTGT GGCACTCCCTCTACGGCCAGTACCCGGCCGAGATCGGCGGGATCCCGGTGCGCATGCAGATGCCCTTCACGCTGACGCCC GACGTGGTGGCGCAGATCAACCAGTCCGCGGCCTTCCTGTTCTCCATCAAGAGCATCAACGTCGAGAAGCTGCGCGCCGA CGCGCTGATGAACGACATGGCGGCGCAGGTGCTCAAGGAGCGCAACCTGAGTTCGCCGATCGGTGAGGTCAAGGCCATGC CCGACAGCGAGTACGGCAAGAAGTAG
Upstream 100 bases:
>100_bases GAAGGCAAGCAACAACAAGGAAGCCCGCAGAGGGAGTCGAATGGTCCGATAAAACCGGGCCCGCTGCGCGGGCACCGCAT GAACCAACAAGGAGACAAGC
Downstream 100 bases:
>100_bases CCGGCCGTTCGGCCCCGAGCGAGAGAGAGCAGCCGGTCATCGCCGCGGCCAGGAGCCGCAGGCGGTGCCGCCACTCGGCC CCATTCAGGAGGATGCATGG
Product: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTFWMNQRVRAAAAAMAVACGLGIGAPSTALAADLDYGKPGDPVQLVIGYQPYYTQSWSGVVMRGKKFYEKYLPKGSTVD FSIGLQGAVIVNAMLAGKQHIGYMGDMPAIVSTTKESVADIRIVATLGVGFDQCNILLARNDAPKFGNGKEGVKWLEGKR IGIPLGSCADRFAKEAFRKEGVAPAAIMNQNIEVITSGFRAGKLDAAAIWEPTASRLVEEGLARRIASGATVNEKDAGFL AMRADLIKQRPDVAKAWLNAELDAQLFLADPKNAMEVAAMAAQQATGFTEKMLWHSLYGQYPAEIGGIPVRMQMPFTLTP DVVAQINQSAAFLFSIKSINVEKLRADALMNDMAAQVLKERNLSSPIGEVKAMPDSEYGKK
Sequences:
>Translated_381_residues MTFWMNQRVRAAAAAMAVACGLGIGAPSTALAADLDYGKPGDPVQLVIGYQPYYTQSWSGVVMRGKKFYEKYLPKGSTVD FSIGLQGAVIVNAMLAGKQHIGYMGDMPAIVSTTKESVADIRIVATLGVGFDQCNILLARNDAPKFGNGKEGVKWLEGKR IGIPLGSCADRFAKEAFRKEGVAPAAIMNQNIEVITSGFRAGKLDAAAIWEPTASRLVEEGLARRIASGATVNEKDAGFL AMRADLIKQRPDVAKAWLNAELDAQLFLADPKNAMEVAAMAAQQATGFTEKMLWHSLYGQYPAEIGGIPVRMQMPFTLTP DVVAQINQSAAFLFSIKSINVEKLRADALMNDMAAQVLKERNLSSPIGEVKAMPDSEYGKK >Mature_380_residues TFWMNQRVRAAAAAMAVACGLGIGAPSTALAADLDYGKPGDPVQLVIGYQPYYTQSWSGVVMRGKKFYEKYLPKGSTVDF SIGLQGAVIVNAMLAGKQHIGYMGDMPAIVSTTKESVADIRIVATLGVGFDQCNILLARNDAPKFGNGKEGVKWLEGKRI GIPLGSCADRFAKEAFRKEGVAPAAIMNQNIEVITSGFRAGKLDAAAIWEPTASRLVEEGLARRIASGATVNEKDAGFLA MRADLIKQRPDVAKAWLNAELDAQLFLADPKNAMEVAAMAAQQATGFTEKMLWHSLYGQYPAEIGGIPVRMQMPFTLTPD VVAQINQSAAFLFSIKSINVEKLRADALMNDMAAQVLKERNLSSPIGEVKAMPDSEYGKK
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41030; Mature: 40899
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFWMNQRVRAAAAAMAVACGLGIGAPSTALAADLDYGKPGDPVQLVIGYQPYYTQSWSG CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCEEEEEECCCCCCCCCCC VVMRGKKFYEKYLPKGSTVDFSIGLQGAVIVNAMLAGKQHIGYMGDMPAIVSTTKESVAD HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHH IRIVATLGVGFDQCNILLARNDAPKFGNGKEGVKWLEGKRIGIPLGSCADRFAKEAFRKE EEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCEECCCHHHHHHHHHHHHHHHC GVAPAAIMNQNIEVITSGFRAGKLDAAAIWEPTASRLVEEGLARRIASGATVNEKDAGFL CCCCHHHHCCCHHEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AMRADLIKQRPDVAKAWLNAELDAQLFLADPKNAMEVAAMAAQQATGFTEKMLWHSLYGQ HHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC YPAEIGGIPVRMQMPFTLTPDVVAQINQSAAFLFSIKSINVEKLRADALMNDMAAQVLKE CCHHHCCEEEEEECCCEECHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH RNLSSPIGEVKAMPDSEYGKK CCCCCCHHHHCCCCCHHCCCC >Mature Secondary Structure TFWMNQRVRAAAAAMAVACGLGIGAPSTALAADLDYGKPGDPVQLVIGYQPYYTQSWSG CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCEEEEEECCCCCCCCCCC VVMRGKKFYEKYLPKGSTVDFSIGLQGAVIVNAMLAGKQHIGYMGDMPAIVSTTKESVAD HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHH IRIVATLGVGFDQCNILLARNDAPKFGNGKEGVKWLEGKRIGIPLGSCADRFAKEAFRKE EEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCEECCCHHHHHHHHHHHHHHHC GVAPAAIMNQNIEVITSGFRAGKLDAAAIWEPTASRLVEEGLARRIASGATVNEKDAGFL CCCCHHHHCCCHHEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AMRADLIKQRPDVAKAWLNAELDAQLFLADPKNAMEVAAMAAQQATGFTEKMLWHSLYGQ HHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC YPAEIGGIPVRMQMPFTLTPDVVAQINQSAAFLFSIKSINVEKLRADALMNDMAAQVLKE CCHHHCCEEEEEECCCEECHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH RNLSSPIGEVKAMPDSEYGKK CCCCCCHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA