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The map label for this gene is kstR2 [H]

Identifier: 124266106

GI number: 124266106

Start: 968753

End: 969340

Strand: Reverse

Name: kstR2 [H]

Synonym: Mpe_A0913

Alternate gene names: 124266106

Gene position: 969340-968753 (Counterclockwise)

Preceding gene: 124266110

Following gene: 124266103

Centisome position: 23.97

GC content: 68.71

Gene sequence:

>588_bases
ATGAACAAGAACAAGGCCCCCGCCGAAGCCTCCCAGCGAGACCGCATCCTCAAGACCGCGGCCCAGCTGTTTGCGGCGCG
CGGCTTCCACGCGGTCGGCATCGCCGAACTCGGCGACGCGGTCTCGCTCGGGCGCGGCGCGCTCTACCACCACATCCGAA
GCAAGGAAGACCTGCTGTACGACATCAGCCGCGAGTACATCGTCGACCTGGCCGCGCACGCCGCCGAAGTGGCACGCAGC
GAGCTGCCGCCGGCCGAGCGGCTGGTGCTGCTGGGCGATTACCTGATGCTGAAGATCGCGTCGCACCAGGCCGAGCTGAC
GGTGTGCTTCCGCGAGGTGCAGTCGCTCACCGGCGAGCGGCACCGCGAGGTGATGGCGCTGCACGCCCGCTACGAGGGAG
CGTGGAAGAGCATCCTGGTCGATGGCGAACGCCAGGGCGTGTTCCGCCCCTACGACGCCATCGTCCTCAAGGGCCTGCTG
GGCATGTACTTCTACAGCTACCTGTGGCTCAAGCCTTCGGGCCGCGTCGGGCCGCGGCAGATCGCCGAGCGCTTCAACTC
GATGGCGCTGCGGGCGCTGGCCGCCTGA

Upstream 100 bases:

>100_bases
GCACCGATCGGCGCTCGCGCCGACCCCGTATCGAAGGGTGGAACAAACGGTACAGCGGCCTCTAGAATCCGGCTGTCGAT
TGCCGATTTCAGAACGACCG

Downstream 100 bases:

>100_bases
CGCCGCGGTCCCGCGGCGCCCGGCAGCCGCCGTTCAGCGCGCCGCGCTCGAGATCGGCGGGCAGTCGCGCATGCACCGCG
TGGCCCGGGTGTCGGGCCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNKNKAPAEASQRDRILKTAAQLFAARGFHAVGIAELGDAVSLGRGALYHHIRSKEDLLYDISREYIVDLAAHAAEVARS
ELPPAERLVLLGDYLMLKIASHQAELTVCFREVQSLTGERHREVMALHARYEGAWKSILVDGERQGVFRPYDAIVLKGLL
GMYFYSYLWLKPSGRVGPRQIAERFNSMALRALAA

Sequences:

>Translated_195_residues
MNKNKAPAEASQRDRILKTAAQLFAARGFHAVGIAELGDAVSLGRGALYHHIRSKEDLLYDISREYIVDLAAHAAEVARS
ELPPAERLVLLGDYLMLKIASHQAELTVCFREVQSLTGERHREVMALHARYEGAWKSILVDGERQGVFRPYDAIVLKGLL
GMYFYSYLWLKPSGRVGPRQIAERFNSMALRALAA
>Mature_195_residues
MNKNKAPAEASQRDRILKTAAQLFAARGFHAVGIAELGDAVSLGRGALYHHIRSKEDLLYDISREYIVDLAAHAAEVARS
ELPPAERLVLLGDYLMLKIASHQAELTVCFREVQSLTGERHREVMALHARYEGAWKSILVDGERQGVFRPYDAIVLKGLL
GMYFYSYLWLKPSGRVGPRQIAERFNSMALRALAA

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21807; Mature: 21807

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNKAPAEASQRDRILKTAAQLFAARGFHAVGIAELGDAVSLGRGALYHHIRSKEDLLY
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
DISREYIVDLAAHAAEVARSELPPAERLVLLGDYLMLKIASHQAELTVCFREVQSLTGER
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HREVMALHARYEGAWKSILVDGERQGVFRPYDAIVLKGLLGMYFYSYLWLKPSGRVGPRQ
HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IAERFNSMALRALAA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKNKAPAEASQRDRILKTAAQLFAARGFHAVGIAELGDAVSLGRGALYHHIRSKEDLLY
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
DISREYIVDLAAHAAEVARSELPPAERLVLLGDYLMLKIASHQAELTVCFREVQSLTGER
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HREVMALHARYEGAWKSILVDGERQGVFRPYDAIVLKGLLGMYFYSYLWLKPSGRVGPRQ
HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IAERFNSMALRALAA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA