Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124266103

Identifier: 124266103

GI number: 124266103

Start: 965783

End: 966595

Strand: Reverse

Name: 124266103

Synonym: Mpe_A0910

Alternate gene names: NA

Gene position: 966595-965783 (Counterclockwise)

Preceding gene: 124266106

Following gene: 124266102

Centisome position: 23.9

GC content: 73.43

Gene sequence:

>813_bases
ATGGCCGAACCGCGCCTGACCCGCCACCACCGTGCCCGCCTGCTGCAGATCTGGCGCTCGGCGGGCTGGCCTTGCCGGGA
CGGCATCGAGATCGACCTGCTGGCTGCGCAATGGCTCTGCGTGCACACCACGCCCGAGGGCCGCGACACGCTGCGACTCA
CCGACGCCGGCATCGAGGTGCTGGCCGATGCGCGCCGGCGTGGCGCGCGCGAACTCGGCGCACACGACCGCCTGGCGCAG
AAGTTCGCCGAGCACCTGATGCGCGCGGGCCGCATCGTCTGGCGCGAACTGTCCCTGCGCGCCGCCATCGACGCGCCGCC
GACCGGGCAGCCCGTGCCGGATCAGTCTCCCGCCGTGCCCACGCTGTGGCAGGACGCCGGCGCGGGCCACGCCGCGCCCG
CCGGCGTGTGGCGCATCGCACGGCCCGACCTCTACTCGGTGCGCAACACCAGTGTCGAGGCCTATCTGCAGCCCATGGTC
CACGAGGTGAAGGCGACGCGGGCCGACCTGCTGTCCGACCTGCGACACGCCGCCAAGCGGCAGGCCTACCAGTGGCTGTG
CAGCGAGTGCCACTACGTGTTCCCGGTGGCGGTGGCGCGGCCCGAGGAAATCCCCGAGGCCTTCGGCGTCTGGGTGCTGC
ACGGCAGCCTTGAAGACGGTCACTTCGAGCAACTGCGCCCCGCGCGCCATGCCCGCTGCACGCTGCCCTTCGCGGTCTGG
CTGGCGCTGGCCCGGGCCACGCCGCTGCGCAGCGACAGCGACATCGACAGCGCGCAGGCCCTGCTGGGTGACGCCGGACC
GGGCCAGTCGTGA

Upstream 100 bases:

>100_bases
CTGTCAAGGCGAACGCGGCACTCGTTTACCCGGCCGCGACGAGAAGCGTGGTACTGTATTTACGAACAGTATCTTTTCGC
ACCCTCCTGCCTCCCCTTCC

Downstream 100 bases:

>100_bases
ACCCCCGCTACACCGTCGCGGTGCGCGAACTCTGCGAGTTCGCTGCCAAGCAGGGCGATCTCGACCTGCGCTTCACACCC
GCGCCCAGCGCGCTGGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAEPRLTRHHRARLLQIWRSAGWPCRDGIEIDLLAAQWLCVHTTPEGRDTLRLTDAGIEVLADARRRGARELGAHDRLAQ
KFAEHLMRAGRIVWRELSLRAAIDAPPTGQPVPDQSPAVPTLWQDAGAGHAAPAGVWRIARPDLYSVRNTSVEAYLQPMV
HEVKATRADLLSDLRHAAKRQAYQWLCSECHYVFPVAVARPEEIPEAFGVWVLHGSLEDGHFEQLRPARHARCTLPFAVW
LALARATPLRSDSDIDSAQALLGDAGPGQS

Sequences:

>Translated_270_residues
MAEPRLTRHHRARLLQIWRSAGWPCRDGIEIDLLAAQWLCVHTTPEGRDTLRLTDAGIEVLADARRRGARELGAHDRLAQ
KFAEHLMRAGRIVWRELSLRAAIDAPPTGQPVPDQSPAVPTLWQDAGAGHAAPAGVWRIARPDLYSVRNTSVEAYLQPMV
HEVKATRADLLSDLRHAAKRQAYQWLCSECHYVFPVAVARPEEIPEAFGVWVLHGSLEDGHFEQLRPARHARCTLPFAVW
LALARATPLRSDSDIDSAQALLGDAGPGQS
>Mature_269_residues
AEPRLTRHHRARLLQIWRSAGWPCRDGIEIDLLAAQWLCVHTTPEGRDTLRLTDAGIEVLADARRRGARELGAHDRLAQK
FAEHLMRAGRIVWRELSLRAAIDAPPTGQPVPDQSPAVPTLWQDAGAGHAAPAGVWRIARPDLYSVRNTSVEAYLQPMVH
EVKATRADLLSDLRHAAKRQAYQWLCSECHYVFPVAVARPEEIPEAFGVWVLHGSLEDGHFEQLRPARHARCTLPFAVWL
ALARATPLRSDSDIDSAQALLGDAGPGQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29982; Mature: 29851

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPRLTRHHRARLLQIWRSAGWPCRDGIEIDLLAAQWLCVHTTPEGRDTLRLTDAGIEV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEECCCCCCCEEEEEHHHHHH
LADARRRGARELGAHDRLAQKFAEHLMRAGRIVWRELSLRAAIDAPPTGQPVPDQSPAVP
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
TLWQDAGAGHAAPAGVWRIARPDLYSVRNTSVEAYLQPMVHEVKATRADLLSDLRHAAKR
CHHHCCCCCCCCCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAYQWLCSECHYVFPVAVARPEEIPEAFGVWVLHGSLEDGHFEQLRPARHARCTLPFAVW
HHHHHHHHCCCEEEEEHHCCCHHHHHHHCEEEEECCCCCCCHHHHCHHHHHHCCHHHHHH
LALARATPLRSDSDIDSAQALLGDAGPGQS
HHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AEPRLTRHHRARLLQIWRSAGWPCRDGIEIDLLAAQWLCVHTTPEGRDTLRLTDAGIEV
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEEEEECCCCCCCEEEEEHHHHHH
LADARRRGARELGAHDRLAQKFAEHLMRAGRIVWRELSLRAAIDAPPTGQPVPDQSPAVP
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
TLWQDAGAGHAAPAGVWRIARPDLYSVRNTSVEAYLQPMVHEVKATRADLLSDLRHAAKR
CHHHCCCCCCCCCCCCEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAYQWLCSECHYVFPVAVARPEEIPEAFGVWVLHGSLEDGHFEQLRPARHARCTLPFAVW
HHHHHHHHCCCEEEEEHHCCCHHHHHHHCEEEEECCCCCCCHHHHCHHHHHHCCHHHHHH
LALARATPLRSDSDIDSAQALLGDAGPGQS
HHHHHCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA