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The map label for this gene is ydhP [H]

Identifier: 124266065

GI number: 124266065

Start: 911201

End: 912478

Strand: Direct

Name: ydhP [H]

Synonym: Mpe_A0872

Alternate gene names: 124266065

Gene position: 911201-912478 (Clockwise)

Preceding gene: 124266064

Following gene: 124266067

Centisome position: 22.53

GC content: 75.59

Gene sequence:

>1278_bases
ATGAATCCTTCGCCCACCGATCTCCTCTCCGCCGCCGGCGCGTCGGCGCCGGTGGCCCGCAGCGATCCGCCGTTCTGGAC
GGCCATCGTCGCGCTCGGCGTCGGCGGCTTCGCCATCGGCACCGGCGAGTTCGTGATCATGGGCCTGCTGCCCGAGGTGG
CCCGTGACCTCGGCGTGAGCATCCCGCAGGCCGGCCACGTGATCAGCGCCTACGCGCTGGGCGTGGTGGTCGGTGCGCCG
GTGCTCGCGGTGCTGGCCGCCGGCTGGCCGCGGCGTCGGCTGCTGATGGCCCTGATGGCGCTGTTCGCGCTGGGCAACTT
CGCCAGCGCGCTGGCGCCGGGCTATCTGTTGCTGAACGCGCTGCGCTTCATCGCCGGCCTGCCGCACGGCACCTACTTCG
GTGTGGCCGCACTGGTGGCCGCCTCGCTGGCGCCACCCGACCGCCGCGCCGGCGCGGTGGGTCTGGTGATGCTGGGCCTG
ACCAGCGCCACGCTGGTCGGCGTGCCGATCGCGGCCTGGATGGGCCAGCACTGGGGCTGGCGGTCCGCATTCGTGCTGGT
CGGTGCGATCGCCGCGCTGGCCTGCGTGCTGGTGCGCCGCGGCGTGCCCGACCTGCCGGCGGCGCAGGGCGCGAGCCCGC
TGCGCGAGCTGGGCGCGCTGGCGCGGCCCCAGGTGTGGCTCACGCTGGGCATCGGCGCCATCGGCTTCGGCGGCATGTTC
GCGGTGTTCAGCTACATCAAGCCCACGCTGACCGAGGTATCCGGCCTGCCGCTGGGCGCGGTGCCGGCGGTGCTGTCGCT
GTTCGGCCTGGGCATGGTGGCCGGCAACCTGGTGGGCTCGCGGCTCGCCGACCGCGCGCTGATGCGCACGGTGGCCGGCC
TGCTGCTGTGGAGCGCGCTGGTGCTGGGCTCCTTCGTGTTCACCGCCCACCACCCGGTCAGCGCCGCGGCCAGCGTGTTC
CTGGTCGGCACCGTGGTGGCGCTGGCGCCGGCGCTGCAGATCCGCCTGATGGACGTGGCCGGCGACGCGCAGACGCTGGC
CGCCGCGCTGAACCACTCGGCCTTCAACATGGCCAACGCGCTCGGCGCCTGGCTGGGCGGCGTGGCCATCGCCGCCGGCC
TGGGCTGGGCCTCGACCGGCTGGGTCGGCGCGCTGCTCGCGCTGGGCGGGCTGGTGGTGTTCGGCCTCGCGCTGCGGCAG
GACCGGCGCGCGCGCCGCGCGGCGGCCGTGCCCGGCGGCGCTCAGCTGCCGGCGGCCAGCGGCAGCGCGGTCTTGTAG

Upstream 100 bases:

>100_bases
GAAGATGGCTCGCGTTGCAGCCGGTCCGTCCTCCGGTTAGCACGCTCTGCAAAGGCCTGCGGCGACCGGGACTTGCTGCG
ACGCAACACAATGCGTCGCG

Downstream 100 bases:

>100_bases
CGCACCTGCTTCAGCGCGAAGCTGGAGCGGATCTTCTCCACCTGCGCGATCGGCGACAGCTGTTCGAGGATGAAGCGCTC
CAGCGCCGCCATGTCGGCCA

Product: putative transport transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNPSPTDLLSAAGASAPVARSDPPFWTAIVALGVGGFAIGTGEFVIMGLLPEVARDLGVSIPQAGHVISAYALGVVVGAP
VLAVLAAGWPRRRLLMALMALFALGNFASALAPGYLLLNALRFIAGLPHGTYFGVAALVAASLAPPDRRAGAVGLVMLGL
TSATLVGVPIAAWMGQHWGWRSAFVLVGAIAALACVLVRRGVPDLPAAQGASPLRELGALARPQVWLTLGIGAIGFGGMF
AVFSYIKPTLTEVSGLPLGAVPAVLSLFGLGMVAGNLVGSRLADRALMRTVAGLLLWSALVLGSFVFTAHHPVSAAASVF
LVGTVVALAPALQIRLMDVAGDAQTLAAALNHSAFNMANALGAWLGGVAIAAGLGWASTGWVGALLALGGLVVFGLALRQ
DRRARRAAAVPGGAQLPAASGSAVL

Sequences:

>Translated_425_residues
MNPSPTDLLSAAGASAPVARSDPPFWTAIVALGVGGFAIGTGEFVIMGLLPEVARDLGVSIPQAGHVISAYALGVVVGAP
VLAVLAAGWPRRRLLMALMALFALGNFASALAPGYLLLNALRFIAGLPHGTYFGVAALVAASLAPPDRRAGAVGLVMLGL
TSATLVGVPIAAWMGQHWGWRSAFVLVGAIAALACVLVRRGVPDLPAAQGASPLRELGALARPQVWLTLGIGAIGFGGMF
AVFSYIKPTLTEVSGLPLGAVPAVLSLFGLGMVAGNLVGSRLADRALMRTVAGLLLWSALVLGSFVFTAHHPVSAAASVF
LVGTVVALAPALQIRLMDVAGDAQTLAAALNHSAFNMANALGAWLGGVAIAAGLGWASTGWVGALLALGGLVVFGLALRQ
DRRARRAAAVPGGAQLPAASGSAVL
>Mature_425_residues
MNPSPTDLLSAAGASAPVARSDPPFWTAIVALGVGGFAIGTGEFVIMGLLPEVARDLGVSIPQAGHVISAYALGVVVGAP
VLAVLAAGWPRRRLLMALMALFALGNFASALAPGYLLLNALRFIAGLPHGTYFGVAALVAASLAPPDRRAGAVGLVMLGL
TSATLVGVPIAAWMGQHWGWRSAFVLVGAIAALACVLVRRGVPDLPAAQGASPLRELGALARPQVWLTLGIGAIGFGGMF
AVFSYIKPTLTEVSGLPLGAVPAVLSLFGLGMVAGNLVGSRLADRALMRTVAGLLLWSALVLGSFVFTAHHPVSAAASVF
LVGTVVALAPALQIRLMDVAGDAQTLAAALNHSAFNMANALGAWLGGVAIAAGLGWASTGWVGALLALGGLVVFGLALRQ
DRRARRAAAVPGGAQLPAASGSAVL

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=376, Percent_Identity=41.2234042553192, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1786595, Length=378, Percent_Identity=34.6560846560847, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI1787808, Length=373, Percent_Identity=26.5415549597855, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI145693198, Length=351, Percent_Identity=23.9316239316239, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87082231, Length=187, Percent_Identity=24.5989304812834, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42700; Mature: 42700

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]