Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 124266038

GI number: 124266038

Start: 880815

End: 881564

Strand: Direct

Name: ybgI [C]

Synonym: Mpe_A0845

Alternate gene names: 124266038

Gene position: 880815-881564 (Clockwise)

Preceding gene: 124266036

Following gene: 124266039

Centisome position: 21.78

GC content: 69.87

Gene sequence:

>750_bases
TTGACGAGCCGTGAAGAGCTGGAAAACTACCTGTCCACGCTGCTCGAACTCGAGCGGTTCAAGGATTATGGGCCGAACGG
TTTGCAGGTCGAGGGCAAGCCGGAGATCCGCAAGATCGTCTCCGGCGTCACCGCCAGCCTGGCCTTCATCGAGGCAGCGG
CCGCGGCCGGGGCCGATGCGGTGCTGGTGCACCACGGGCTGTTCTGGCGCGGTCAGGACGGCCGGCTCAACGGCTGGCTG
AAGAAGCGGGTGGCAGCCTTGCTGGGCCCGGACATCAACCTGTTCGCCTACCACCTGCCGCTCGACGCCCATCCGGAGCA
CGGCAACAACGCCCAGCTCGGGGCCAAGCTCAAGTTCGTCAGCGAAGGCCGCTTCGGCGAGCAGCAGCTCGGCTTCGTCG
GCCGGCCGCCCCAGCCGCTGACCGGCGCGGCGCTGTCGGCGCTGGTCCAGTTCCGGCTCGGGCGCGCGCCGACCGTGGTC
GAGGGCGATGGCCGGCCGATCCGCCGCGTGGCCTGGTGCACCGGCGGTGCTCAGGGCCATTTCGAGGCGGCGATCGCGGC
CGGTGCCGATGCCTACCTGACCGGCGAGATCTCCGAGCCGCAGGCCCACATCGCGCGCGAGACCGGTGTGGCGTTCTATG
CCTGCGGCCACCATGCGACCGAGCGCTTCGGTGCCCCCGCGCTCGGTGCCCACGTGGCGCAGCTGTTCGACCTCGAGCAC
GAGTTCATCGACATCGACAACCCGGCGTGA

Upstream 100 bases:

>100_bases
CCCATTCGGGCTTGAGCGTGGCCACGACGAACCACATCGCCAGGGCGACCGTCACGGCTTGGGAGAAAATCAACCAGGTC
TTGCGCATGGGAGAGAAGAA

Downstream 100 bases:

>100_bases
GCCCGTCCCGCATGCAGCTGCCGCTGGCGATCACGATGGGCGATGCCTGCGGCATCGGCCCGGAGATCATCGCGTCGGCC
TTCCTGCGCGATGCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTSREELENYLSTLLELERFKDYGPNGLQVEGKPEIRKIVSGVTASLAFIEAAAAAGADAVLVHHGLFWRGQDGRLNGWL
KKRVAALLGPDINLFAYHLPLDAHPEHGNNAQLGAKLKFVSEGRFGEQQLGFVGRPPQPLTGAALSALVQFRLGRAPTVV
EGDGRPIRRVAWCTGGAQGHFEAAIAAGADAYLTGEISEPQAHIARETGVAFYACGHHATERFGAPALGAHVAQLFDLEH
EFIDIDNPA

Sequences:

>Translated_249_residues
MTSREELENYLSTLLELERFKDYGPNGLQVEGKPEIRKIVSGVTASLAFIEAAAAAGADAVLVHHGLFWRGQDGRLNGWL
KKRVAALLGPDINLFAYHLPLDAHPEHGNNAQLGAKLKFVSEGRFGEQQLGFVGRPPQPLTGAALSALVQFRLGRAPTVV
EGDGRPIRRVAWCTGGAQGHFEAAIAAGADAYLTGEISEPQAHIARETGVAFYACGHHATERFGAPALGAHVAQLFDLEH
EFIDIDNPA
>Mature_248_residues
TSREELENYLSTLLELERFKDYGPNGLQVEGKPEIRKIVSGVTASLAFIEAAAAAGADAVLVHHGLFWRGQDGRLNGWLK
KRVAALLGPDINLFAYHLPLDAHPEHGNNAQLGAKLKFVSEGRFGEQQLGFVGRPPQPLTGAALSALVQFRLGRAPTVVE
GDGRPIRRVAWCTGGAQGHFEAAIAAGADAYLTGEISEPQAHIARETGVAFYACGHHATERFGAPALGAHVAQLFDLEHE
FIDIDNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=246, Percent_Identity=49.1869918699187, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26717; Mature: 26586

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSREELENYLSTLLELERFKDYGPNGLQVEGKPEIRKIVSGVTASLAFIEAAAAAGADA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
VLVHHGLFWRGQDGRLNGWLKKRVAALLGPDINLFAYHLPLDAHPEHGNNAQLGAKLKFV
EEEECCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE
SEGRFGEQQLGFVGRPPQPLTGAALSALVQFRLGRAPTVVEGDGRPIRRVAWCTGGAQGH
ECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC
FEAAIAAGADAYLTGEISEPQAHIARETGVAFYACGHHATERFGAPALGAHVAQLFDLEH
HHHHHHCCCCEEEECCCCCCHHHHHHHCCEEEEECCCHHHHHCCCCHHHHHHHHHHHCHH
EFIDIDNPA
HEEECCCCC
>Mature Secondary Structure 
TSREELENYLSTLLELERFKDYGPNGLQVEGKPEIRKIVSGVTASLAFIEAAAAAGADA
CCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
VLVHHGLFWRGQDGRLNGWLKKRVAALLGPDINLFAYHLPLDAHPEHGNNAQLGAKLKFV
EEEECCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE
SEGRFGEQQLGFVGRPPQPLTGAALSALVQFRLGRAPTVVEGDGRPIRRVAWCTGGAQGH
ECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC
FEAAIAAGADAYLTGEISEPQAHIARETGVAFYACGHHATERFGAPALGAHVAQLFDLEH
HHHHHHCCCCEEEECCCCCCHHHHHHHCCEEEEECCCHHHHHCCCCHHHHHHHHHHHCHH
EFIDIDNPA
HEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]