| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is tatC [H]
Identifier: 124266036
GI number: 124266036
Start: 878857
End: 879645
Strand: Direct
Name: tatC [H]
Synonym: Mpe_A0843
Alternate gene names: 124266036
Gene position: 878857-879645 (Clockwise)
Preceding gene: 124266035
Following gene: 124266038
Centisome position: 21.73
GC content: 66.67
Gene sequence:
>789_bases GTGGGCGCCCCCGACTCCCGCGACGAGCTCGAAGGCAGCGAGCAGCCTTTCGTCGCGCACCTGATCGAACTGCGCGACCG GCTGATCCGCGCGGTGCTGGCGATCGTTGTCTGCTTCGGTGCTCTGGCGCTCTGGCCCGGCCCGTCGGCGCTCTACGACC TGCTGGCCGCGCCGCTGGTGGCGCACCTGCCGGCCGGCACGACGCTGATCGCGACCAACGTGATCTCGCCGTTCCTGGTG CCGCTGAAGATCACGCTGATGGCGGCCTTCATGCTCGCGCTGCCGGTGGTGCTGTACCAGGTGTGGGCCTTCGTCGCGCC CGGTCTCTACACGCACGAGAAGAAGCTGGTGATGCCGCTGGTGGTGTCGAGCACGCTGCTGTTCCTGCTGGGCGTGGCGT TCTGCTACTTCTTCGTGTTCGGGCAGGTGTTCAAGTTCATCCAGAGCTTTGCGCCGAAGAGCATCACCGCGGCGCCGGAC ATCGAGGCCTATCTCGGCTTCGTGCTGAGCATGTTCATCGCCTTCGGCGCGGCGTTCGAGGTGCCGGTGGTGGTGGTGGT GCTGGCGCGCATGGGCATCGTGTCGATCGAGAAGCTGAAGGGCTTCCGCGCCTACTTCATCGTCGTCGCCTTCATCATCG CGGCGATCGTCACGCCGCCCGACGTGATCTCGCAGCTCGCGCTCGCGATCCCGATGTGCATCCTCTACGAGATCGGGATC TGGGCCGCCAAGGTGTTCATCAAGCACACCCAGGCGCCCGATGCGGCGGCCGAGGACGGCGCCGTCTAG
Upstream 100 bases:
>100_bases CATGCCTCAGTGGTACAAGCAGCGGCACGGCGTGCGGGCCAAGGCCCAGTCGGGTGCCGCCCGTGTGGCGCGCTTCAGGC CGCCGCGCCCGCTATAGCCC
Downstream 100 bases:
>100_bases GGTTCGCGCTGCTGCCGCGGTGCCTTCGGCCGCTGCGCGACGATGACGTCGAGCGTCACTTCGCTGTCGCCCCGTTGCAC CACGAGCCGGGCCTTCGAGC
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGAPDSRDELEGSEQPFVAHLIELRDRLIRAVLAIVVCFGALALWPGPSALYDLLAAPLVAHLPAGTTLIATNVISPFLV PLKITLMAAFMLALPVVLYQVWAFVAPGLYTHEKKLVMPLVVSSTLLFLLGVAFCYFFVFGQVFKFIQSFAPKSITAAPD IEAYLGFVLSMFIAFGAAFEVPVVVVVLARMGIVSIEKLKGFRAYFIVVAFIIAAIVTPPDVISQLALAIPMCILYEIGI WAAKVFIKHTQAPDAAAEDGAV
Sequences:
>Translated_262_residues MGAPDSRDELEGSEQPFVAHLIELRDRLIRAVLAIVVCFGALALWPGPSALYDLLAAPLVAHLPAGTTLIATNVISPFLV PLKITLMAAFMLALPVVLYQVWAFVAPGLYTHEKKLVMPLVVSSTLLFLLGVAFCYFFVFGQVFKFIQSFAPKSITAAPD IEAYLGFVLSMFIAFGAAFEVPVVVVVLARMGIVSIEKLKGFRAYFIVVAFIIAAIVTPPDVISQLALAIPMCILYEIGI WAAKVFIKHTQAPDAAAEDGAV >Mature_261_residues GAPDSRDELEGSEQPFVAHLIELRDRLIRAVLAIVVCFGALALWPGPSALYDLLAAPLVAHLPAGTTLIATNVISPFLVP LKITLMAAFMLALPVVLYQVWAFVAPGLYTHEKKLVMPLVVSSTLLFLLGVAFCYFFVFGQVFKFIQSFAPKSITAAPDI EAYLGFVLSMFIAFGAAFEVPVVVVVLARMGIVSIEKLKGFRAYFIVVAFIIAAIVTPPDVISQLALAIPMCILYEIGIW AAKVFIKHTQAPDAAAEDGAV
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=249, Percent_Identity=47.7911646586345, Blast_Score=242, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28255; Mature: 28124
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPDSRDELEGSEQPFVAHLIELRDRLIRAVLAIVVCFGALALWPGPSALYDLLAAPLV CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AHLPAGTTLIATNVISPFLVPLKITLMAAFMLALPVVLYQVWAFVAPGLYTHEKKLVMPL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHH VVSSTLLFLLGVAFCYFFVFGQVFKFIQSFAPKSITAAPDIEAYLGFVLSMFIAFGAAFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH VPVVVVVLARMGIVSIEKLKGFRAYFIVVAFIIAAIVTPPDVISQLALAIPMCILYEIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WAAKVFIKHTQAPDAAAEDGAV HHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GAPDSRDELEGSEQPFVAHLIELRDRLIRAVLAIVVCFGALALWPGPSALYDLLAAPLV CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AHLPAGTTLIATNVISPFLVPLKITLMAAFMLALPVVLYQVWAFVAPGLYTHEKKLVMPL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHH VVSSTLLFLLGVAFCYFFVFGQVFKFIQSFAPKSITAAPDIEAYLGFVLSMFIAFGAAFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH VPVVVVVLARMGIVSIEKLKGFRAYFIVVAFIIAAIVTPPDVISQLALAIPMCILYEIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WAAKVFIKHTQAPDAAAEDGAV HHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]