| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is hisA
Identifier: 124266028
GI number: 124266028
Start: 874819
End: 875565
Strand: Direct
Name: hisA
Synonym: Mpe_A0835
Alternate gene names: 124266028
Gene position: 874819-875565 (Clockwise)
Preceding gene: 124266027
Following gene: 124266029
Centisome position: 21.63
GC content: 68.14
Gene sequence:
>747_bases ATGTTGCTGATCCCTGCCATCGACCTGAAAGACGGCCGCTGCGTGCGCCTGAAGCAAGGCGACATGAATGTGTCCACCAC CTTCGGTGAGGACCCCGTCGCGATGGCCCGGCGCTGGCTCGACGCCGGGGCGCGCCGCCTGCACCTGGTCGACCTGAACG GCGCCTTCGCCGGCAAGCCGGTCAACGAGCCGGCGATCAAGGCCATCCTGAAGGAAGTGGGCGACGAGATCCCGGTGCAA CTGGGCGGCGGCATCCGTGACCTCGACACCATCGAGCGCTACCTCGACGACGGCCTGTCCTACGTGATCATCGGCACCGC CGCGGTCAAGAACCCGGGCTTCCTGCGCGATGCCTGCACGGCCTTCGGCGGCCACATCATCGTGGGGCTCGATGCCAAGG ACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGGTGGACCTGGCGAAGAAGTTCGAGGACTAC GGCGTCGAGGGCGTGATCTACACCGACATCGGCCGCGACGGCATGCTGAGCGGCATCAACATCGACGCCACCGTCAAGCT GGCGCAGGCACTCACCATCCCGGTGATCGCCTCGGGGGGCCTCAGCGACATCGCCGACATCGAGCGCCTGTGCGCCGTCG AAGGCGAGGGCATCGAGGGTGTGATCTGCGGTCGGGCGATCTACACCGGCGACCTCGACTTCGCCGCGGCGCAGGCGCGG GCCGACGCGCTGAACGGCGACGCCTGA
Upstream 100 bases:
>100_bases TGCCACCCAGTTCCACCCCGAGAAGAGCGCTGCACACGGCCTGGCCCTGTACCGCAACTTCCTCGGCTGGTGCCCCTGAC CCCCCATCCCCCTGACAGCC
Downstream 100 bases:
>100_bases GCGGCGCCCCCGCATGCTCGCCAAGCGCATCATCCCCTGCCTCGACGTCACCGGCGGCCGCGTCGTCAAGGGCGTCAACT TCGTCGAGTTGCGTGATGCC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MLLIPAIDLKDGRCVRLKQGDMNVSTTFGEDPVAMARRWLDAGARRLHLVDLNGAFAGKPVNEPAIKAILKEVGDEIPVQ LGGGIRDLDTIERYLDDGLSYVIIGTAAVKNPGFLRDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKKFEDY GVEGVIYTDIGRDGMLSGINIDATVKLAQALTIPVIASGGLSDIADIERLCAVEGEGIEGVICGRAIYTGDLDFAAAQAR ADALNGDA
Sequences:
>Translated_248_residues MLLIPAIDLKDGRCVRLKQGDMNVSTTFGEDPVAMARRWLDAGARRLHLVDLNGAFAGKPVNEPAIKAILKEVGDEIPVQ LGGGIRDLDTIERYLDDGLSYVIIGTAAVKNPGFLRDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKKFEDY GVEGVIYTDIGRDGMLSGINIDATVKLAQALTIPVIASGGLSDIADIERLCAVEGEGIEGVICGRAIYTGDLDFAAAQAR ADALNGDA >Mature_248_residues MLLIPAIDLKDGRCVRLKQGDMNVSTTFGEDPVAMARRWLDAGARRLHLVDLNGAFAGKPVNEPAIKAILKEVGDEIPVQ LGGGIRDLDTIERYLDDGLSYVIIGTAAVKNPGFLRDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKKFEDY GVEGVIYTDIGRDGMLSGINIDATVKLAQALTIPVIASGGLSDIADIERLCAVEGEGIEGVICGRAIYTGDLDFAAAQAR ADALNGDA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=34.2857142857143, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1788336, Length=209, Percent_Identity=24.8803827751196, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_METPP (A2SE08)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001020032.1 - ProteinModelPortal: A2SE08 - STRING: A2SE08 - GeneID: 4786970 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0835 - NMPDR: fig|279263.3.peg.2040 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - PhylomeDB: A2SE08 - ProtClustDB: PRK00748 - BioCyc: MPET420662:MPE_A0835-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26107; Mature: 26107
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGRCVRLKQGDMNVSTTFGEDPVAMARRWLDAGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC VNEPAIKAILKEVGDEIPVQLGGGIRDLDTIERYLDDGLSYVIIGTAAVKNPGFLRDACT CCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKKFEDYGVEGVIYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IDATVKLAQALTIPVIASGGLSDIADIERLCAVEGEGIEGVICGRAIYTGDLDFAAAQAR CCHHEEEHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCEEEECCCCHHHHHHH ADALNGDA HHCCCCCC >Mature Secondary Structure MLLIPAIDLKDGRCVRLKQGDMNVSTTFGEDPVAMARRWLDAGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC VNEPAIKAILKEVGDEIPVQLGGGIRDLDTIERYLDDGLSYVIIGTAAVKNPGFLRDACT CCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVVDLAKKFEDYGVEGVIYTDIGRDGMLSGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC IDATVKLAQALTIPVIASGGLSDIADIERLCAVEGEGIEGVICGRAIYTGDLDFAAAQAR CCHHEEEHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCEEEECCCCHHHHHHH ADALNGDA HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA