Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yrbA [C]

Identifier: 124266021

GI number: 124266021

Start: 868713

End: 868991

Strand: Direct

Name: yrbA [C]

Synonym: Mpe_A0828

Alternate gene names: 124266021

Gene position: 868713-868991 (Clockwise)

Preceding gene: 124266020

Following gene: 124266022

Centisome position: 21.48

GC content: 69.53

Gene sequence:

>279_bases
ATGGCCGACCCCACCGCAGACGACGTGCAGCGCTACATCGCGCAAGGGCTCGCCTGCGAGCACCTGCAGGTGGATGGCGA
CGGCCGCCATTTCTTCGCCACCATCGTGTCGGCCGAGTTCGACGGCCTGAGCCGCGTCCGCCGCCACCAGCGGGTCTACG
CGGCGCTCGGCGATAGAATGCGCGAACAAATCCACGCGCTGTCGATGAAGACGCTGACGCCGGCCGAATTCGCGGTGCAG
GGCTCCGAGCCCCGCGCCGCCGCTGCCCACCACCACTGA

Upstream 100 bases:

>100_bases
GGGTGGTCGCCACCAGCCTGGCGGCCGTCTCGGCGGTGGCGCTGCGGCTGCTGAAGACCGGCTACAAGCTGCGCTCCTGA
ACGCCCGATACACTGGTGAC

Downstream 100 bases:

>100_bases
TCCACAAGCCGCCCTGTGGCGCGGCTTGTGCGCTCCCTCGTGGCGAGGGCGGTCCGTGCAAGCGCGTGATGCAGGGCGGT
GACGAGCACCGCACCATGGA

Product: BolA family transcriptional regulator

Products: NA

Alternate protein names: BolA-Like Protein; BolA Protein; BolA Family Transcriptional Regulator; BolA-Like Cell Cycle Protein; Bola Family Protein

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRMREQIHALSMKTLTPAEFAVQ
GSEPRAAAAHHH

Sequences:

>Translated_92_residues
MADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRMREQIHALSMKTLTPAEFAVQ
GSEPRAAAAHHH
>Mature_91_residues
ADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRMREQIHALSMKTLTPAEFAVQG
SEPRAAAAHHH

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082226, Length=73, Percent_Identity=39.7260273972603, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10210; Mature: 10078

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRM
CCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
REQIHALSMKTLTPAEFAVQGSEPRAAAAHHH
HHHHHHHHHCCCCCHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
ADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRM
CCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
REQIHALSMKTLTPAEFAVQGSEPRAAAAHHH
HHHHHHHHHCCCCCHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA