| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is yrbA [C]
Identifier: 124266021
GI number: 124266021
Start: 868713
End: 868991
Strand: Direct
Name: yrbA [C]
Synonym: Mpe_A0828
Alternate gene names: 124266021
Gene position: 868713-868991 (Clockwise)
Preceding gene: 124266020
Following gene: 124266022
Centisome position: 21.48
GC content: 69.53
Gene sequence:
>279_bases ATGGCCGACCCCACCGCAGACGACGTGCAGCGCTACATCGCGCAAGGGCTCGCCTGCGAGCACCTGCAGGTGGATGGCGA CGGCCGCCATTTCTTCGCCACCATCGTGTCGGCCGAGTTCGACGGCCTGAGCCGCGTCCGCCGCCACCAGCGGGTCTACG CGGCGCTCGGCGATAGAATGCGCGAACAAATCCACGCGCTGTCGATGAAGACGCTGACGCCGGCCGAATTCGCGGTGCAG GGCTCCGAGCCCCGCGCCGCCGCTGCCCACCACCACTGA
Upstream 100 bases:
>100_bases GGGTGGTCGCCACCAGCCTGGCGGCCGTCTCGGCGGTGGCGCTGCGGCTGCTGAAGACCGGCTACAAGCTGCGCTCCTGA ACGCCCGATACACTGGTGAC
Downstream 100 bases:
>100_bases TCCACAAGCCGCCCTGTGGCGCGGCTTGTGCGCTCCCTCGTGGCGAGGGCGGTCCGTGCAAGCGCGTGATGCAGGGCGGT GACGAGCACCGCACCATGGA
Product: BolA family transcriptional regulator
Products: NA
Alternate protein names: BolA-Like Protein; BolA Protein; BolA Family Transcriptional Regulator; BolA-Like Cell Cycle Protein; Bola Family Protein
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRMREQIHALSMKTLTPAEFAVQ GSEPRAAAAHHH
Sequences:
>Translated_92_residues MADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRMREQIHALSMKTLTPAEFAVQ GSEPRAAAAHHH >Mature_91_residues ADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRMREQIHALSMKTLTPAEFAVQG SEPRAAAAHHH
Specific function: Unknown
COG id: COG5007
COG function: function code K; Predicted transcriptional regulator, BolA superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082226, Length=73, Percent_Identity=39.7260273972603, Blast_Score=62, Evalue=8e-12,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10210; Mature: 10078
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRM CCCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH REQIHALSMKTLTPAEFAVQGSEPRAAAAHHH HHHHHHHHHCCCCCHHHEECCCCCCCCCCCCC >Mature Secondary Structure ADPTADDVQRYIAQGLACEHLQVDGDGRHFFATIVSAEFDGLSRVRRHQRVYAALGDRM CCCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH REQIHALSMKTLTPAEFAVQGSEPRAAAAHHH HHHHHHHHHCCCCCHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA