| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is fadL [C]
Identifier: 124266014
GI number: 124266014
Start: 861912
End: 863285
Strand: Direct
Name: fadL [C]
Synonym: Mpe_A0821
Alternate gene names: 124266014
Gene position: 861912-863285 (Clockwise)
Preceding gene: 124266013
Following gene: 124266015
Centisome position: 21.31
GC content: 60.26
Gene sequence:
>1374_bases ATGAAAAAATTCGCGCTGCATGCCGTTGCCACGGTGGCGTTGCTTGCATTTTCGCACCCTGCGTCGTCGACTGACGTCTT CCGCCTCGAAGGCTATGGAGCCGTTTCCCGCGGGTTGGGTGGCGCTGCAACGGCGGTGGACGTCGGCGCGCCGGGCATGA TGACCAATCCCGCCACGCTGTCGTTGATCAAGGAGGGCGCATCGGTCCATCTCGGCCTGGACATGGTGAATACGGACATC GATGTTCGAAATCAAGCGACCGGAGAAGTGGTCAGTTCCAACAGCCATTCGCACAATCGAGGCCCGTATGTGGCGCCTGA GGCCGCTTTCGTGTACCGACGCGGTGCACTGGCACTTGGCGTTGGCGCATTCGCGCAGGGGGGGTTGGGGACCGAATATG GAAACAGCAGCTTTCTCTCTCGGGCAACCGGTGCGTTGGAGAGCGGTTTGGAGAATTCCAGCCGACTCCTGGTACTGAGC ATCCCTTTTGCTGTCAGCTATGCCGTAGATGAGCGGCTGACGATCGGCGGTAGTCTCGACGCGGTCTGGCAGGGCCTCAA CCTCGAACTGTTGCTGGGCGCGGACCAGGTGGGTTCGCTGATTGGCAGCGGACGTGCCTCAGGCAGTCTGATCGGCGTTC TCGCAGGGCTGCCAGATCTTCGTGGGGCGCACTTCAGTCTGACGCGAGATCAACCACTGAACAGCGGCGTCGATGCTTGG GGATTCGGTGGCCGTGTCGGGCTCACCTACAAAGCGACGGACGCGACACTCCTCGGTGTGGCATACACGCTCGAGGCATC GATGGAGGACATGAAAGGACGTGCGACGCTGACGGCAGTCGACGGTGCGGCGGGGCAGATTCCACTGAATGGTCGGATCA AGCTCCGGGACTTCAAGATGCCGGCTCACGTGGACTTTGGAGTTTCGCACCGGATCGACAGTCGGTGGCTTGTGGCCGCT GATATTTCTCGTGTGTTCTGGCGGCATGCGATGAAGGACATCAACGTTGGATTCGTTGCCGATGGCGGCATCGGCAACAT CGACATCCTCCTGCCGCAAGGCTATAGAGACCAGACCGTGCTGTCGGTCGGAATGGCCTACGGAGTCGACAACTGGACGT GGCGCGGAGGCTTCCGGATTGCGAGTCAGGCACTGCGCTCCGAAACACTGTTTGCAGTAATTCCGGCCATCCCCAGGAAG CACCTGTCTGCAGGTCTCTCGTACAACTTCCCGGCGGGGAGCCGTATCGATGTGGCGTATTCGCACGCCTTCAAGCAGTC GATGAGCAACTCGACGCTCCCGAACACCTCGGATCCGATCAGCATCAGTCACTCTCAGAACAACATGTCGCTGGCTTACG TCCTGCCGTTTTGA
Upstream 100 bases:
>100_bases CGACCTTCCACACCAAGTCAGATGGCGCGATGAAGATGCTCATCAAGCCCTAGCGCTTCTGGCAACCAATCGACACAACA AAAATTGAAGAGGATGACAA
Downstream 100 bases:
>100_bases CGAGGCTTCCGACCACGGGTTTCGGAGGCATCAGTTCATCAGCGCTATGGAGTCGAGGTCGTCGAAGGCCTCGCTATCGC TCTGATGGTGCGGGCGAGTC
Product: long-chain fatty acid transport like protein
Products: NA
Alternate protein names: Aromatic Hydrocarbon Degradation Protein; Long-Chain Fatty Acid Outer Membrane Transporter; Outer Membrane Protein; Transporter Protein; Long-Chain Fatty Acid Transport Like Protein
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKKFALHAVATVALLAFSHPASSTDVFRLEGYGAVSRGLGGAATAVDVGAPGMMTNPATLSLIKEGASVHLGLDMVNTDI DVRNQATGEVVSSNSHSHNRGPYVAPEAAFVYRRGALALGVGAFAQGGLGTEYGNSSFLSRATGALESGLENSSRLLVLS IPFAVSYAVDERLTIGGSLDAVWQGLNLELLLGADQVGSLIGSGRASGSLIGVLAGLPDLRGAHFSLTRDQPLNSGVDAW GFGGRVGLTYKATDATLLGVAYTLEASMEDMKGRATLTAVDGAAGQIPLNGRIKLRDFKMPAHVDFGVSHRIDSRWLVAA DISRVFWRHAMKDINVGFVADGGIGNIDILLPQGYRDQTVLSVGMAYGVDNWTWRGGFRIASQALRSETLFAVIPAIPRK HLSAGLSYNFPAGSRIDVAYSHAFKQSMSNSTLPNTSDPISISHSQNNMSLAYVLPF
Sequences:
>Translated_457_residues MKKFALHAVATVALLAFSHPASSTDVFRLEGYGAVSRGLGGAATAVDVGAPGMMTNPATLSLIKEGASVHLGLDMVNTDI DVRNQATGEVVSSNSHSHNRGPYVAPEAAFVYRRGALALGVGAFAQGGLGTEYGNSSFLSRATGALESGLENSSRLLVLS IPFAVSYAVDERLTIGGSLDAVWQGLNLELLLGADQVGSLIGSGRASGSLIGVLAGLPDLRGAHFSLTRDQPLNSGVDAW GFGGRVGLTYKATDATLLGVAYTLEASMEDMKGRATLTAVDGAAGQIPLNGRIKLRDFKMPAHVDFGVSHRIDSRWLVAA DISRVFWRHAMKDINVGFVADGGIGNIDILLPQGYRDQTVLSVGMAYGVDNWTWRGGFRIASQALRSETLFAVIPAIPRK HLSAGLSYNFPAGSRIDVAYSHAFKQSMSNSTLPNTSDPISISHSQNNMSLAYVLPF >Mature_457_residues MKKFALHAVATVALLAFSHPASSTDVFRLEGYGAVSRGLGGAATAVDVGAPGMMTNPATLSLIKEGASVHLGLDMVNTDI DVRNQATGEVVSSNSHSHNRGPYVAPEAAFVYRRGALALGVGAFAQGGLGTEYGNSSFLSRATGALESGLENSSRLLVLS IPFAVSYAVDERLTIGGSLDAVWQGLNLELLLGADQVGSLIGSGRASGSLIGVLAGLPDLRGAHFSLTRDQPLNSGVDAW GFGGRVGLTYKATDATLLGVAYTLEASMEDMKGRATLTAVDGAAGQIPLNGRIKLRDFKMPAHVDFGVSHRIDSRWLVAA DISRVFWRHAMKDINVGFVADGGIGNIDILLPQGYRDQTVLSVGMAYGVDNWTWRGGFRIASQALRSETLFAVIPAIPRK HLSAGLSYNFPAGSRIDVAYSHAFKQSMSNSTLPNTSDPISISHSQNNMSLAYVLPF
Specific function: Involved In Translocation Of Long-Chain Fatty Acids Across The Outer Membrane. It Is A Receptor For The Bacteriophage T2. FADl May Form A Specific Channel. [C]
COG id: COG2067
COG function: function code I; Long-chain fatty acid transport protein
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48123; Mature: 48123
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFALHAVATVALLAFSHPASSTDVFRLEGYGAVSRGLGGAATAVDVGAPGMMTNPATL CCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCCCEEEECCCCCCCCCCHHH SLIKEGASVHLGLDMVNTDIDVRNQATGEVVSSNSHSHNRGPYVAPEAAFVYRRGALALG HHHHCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHEEEECCCEEEE VGAFAQGGLGTEYGNSSFLSRATGALESGLENSSRLLVLSIPFAVSYAVDERLTIGGSLD HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECEEEEEEECCEEEECCCHH AVWQGLNLELLLGADQVGSLIGSGRASGSLIGVLAGLPDLRGAHFSLTRDQPLNSGVDAW HHHCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCC GFGGRVGLTYKATDATLLGVAYTLEASMEDMKGRATLTAVDGAAGQIPLNGRIKLRDFKM CCCCEEEEEEECCCCEEEEEEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECC PAHVDFGVSHRIDSRWLVAADISRVFWRHAMKDINVGFVADGGIGNIDILLPQGYRDQTV CCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCE LSVGMAYGVDNWTWRGGFRIASQALRSETLFAVIPAIPRKHLSAGLSYNFPAGSRIDVAY EEEHHHHCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCEECCCCCCEEEHHH SHAFKQSMSNSTLPNTSDPISISHSQNNMSLAYVLPF HHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECC >Mature Secondary Structure MKKFALHAVATVALLAFSHPASSTDVFRLEGYGAVSRGLGGAATAVDVGAPGMMTNPATL CCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCCCEEEECCCCCCCCCCHHH SLIKEGASVHLGLDMVNTDIDVRNQATGEVVSSNSHSHNRGPYVAPEAAFVYRRGALALG HHHHCCCEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHEEEECCCEEEE VGAFAQGGLGTEYGNSSFLSRATGALESGLENSSRLLVLSIPFAVSYAVDERLTIGGSLD HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECEEEEEEECCEEEECCCHH AVWQGLNLELLLGADQVGSLIGSGRASGSLIGVLAGLPDLRGAHFSLTRDQPLNSGVDAW HHHCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCC GFGGRVGLTYKATDATLLGVAYTLEASMEDMKGRATLTAVDGAAGQIPLNGRIKLRDFKM CCCCEEEEEEECCCCEEEEEEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEECC PAHVDFGVSHRIDSRWLVAADISRVFWRHAMKDINVGFVADGGIGNIDILLPQGYRDQTV CCEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCE LSVGMAYGVDNWTWRGGFRIASQALRSETLFAVIPAIPRKHLSAGLSYNFPAGSRIDVAY EEEHHHHCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCEECCCCCCEEEHHH SHAFKQSMSNSTLPNTSDPISISHSQNNMSLAYVLPF HHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA