| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is tbuA1 [H]
Identifier: 124266007
GI number: 124266007
Start: 856061
End: 857560
Strand: Direct
Name: tbuA1 [H]
Synonym: Mpe_A0814
Alternate gene names: 124266007
Gene position: 856061-857560 (Clockwise)
Preceding gene: 124266003
Following gene: 124266008
Centisome position: 21.17
GC content: 60.93
Gene sequence:
>1500_bases ATGGCGCTACTTGAGCGGATGGATTGGTACGACCTCGCGCGGACCACCAATTGGACGCCGACCTACGTCAGCGAGGCAGA GCTGTTTCCGACCGAGATGTCGGGGGACATGGGAATCCCGATGTCCGAATGGGAGAAGTACGACGAGCCGTACAAGCAGA CGTATTCGGAGTACGTGAAGATCCAGCGTGAGAAGGATTCAGGCGCCTATTCGGTGAAGGGCGCGCTGGAGCGGAGCAAG ATGCTGGAAAACGCTGACCCAGGCTGGATCAGCGTGATCAAGGCGCACTACGGTGCGATCGCGCGTGCGGAGTATGCGGC AGCGTCCGCGGAGTCGCGCATGGCGCGCTTCGCCAAGGCGCCGGGTCAGCGCAACATGGCGACGATGGGCATGCTCGACG AGATCCGCCATGGCCAGATCCAGCTGTTCTTCCCGCACGAGCACGTGTCGAAAGATCGTCAATTCGACTGGGCATTCAAG GCCTACGACACGAATGAATGGGGCGCCATTGCCGCGCGCCACATGTTCGACGACATGATGAACACGCGCAGTGCGGTGGC CATCGGGTTGATGTTGACCTTCGCCTTCGAGACCGGTTTCACCAACATGCAGTTCCTCGGTCTGGCAGCGGACGCCGCTG AGGCGGGCGACTGGACCTTCGCCAGCATGATCTCCAGCGTCCAGACGGATGAGTCTCGTCATGCTCAGATCGGCGGTCCG CTGGTGCCGATCCTGATCGCGAACGGCAAGAAGGCCGAGGCTCAACGCATGATCGACGTTGCGTTCTGGCGCTCTTGGAA GCTGTTCACTGTGCTGACCGGACCGATGATGGACTACTACACGCCGCTCGCGCATCGCAAGCAGTCGTTCAAGGAGTTCA TGCAGGAGTTCATCGTCACGCAGTTCGAGCGCTCCATCCTGGATCTGGGACTCGAACGACCCTGGTACTGGGACCAGTTC CTGGCGGAACTGGATTACCAGCACCATGGCATGCACCTGGGGGTGTGGTTCTGGCGTCCAACCGTCTGGTGGAACCCGGC TGCAGGCGTCACGCCCGAGGAACGTGCGTGGCTGGAGGAAAAGTATCCGGGCTGGAACGACACGTGGGGCAAGAGCTGGG ACGTCATCGTCGACAACCTGTTGAAAGACAAGCGCGAGCTCACGTATCCGGAAACGCTTCCGGTGGTGTGCAACATGTGC AATCTGCCGATCAACGCAACACCTGGCGATCCCTGGAAGGTCCGAGACCATTCGTTGGAGCGCAAGTCGCGCTGGTATCA CTTCTGTTCAGAAGGCTGCAAATGGTGCTTCGAGCAGGAGCCTGAGCGCTACGAGGGCCACCTGTCGCTGATCGATCGCT TCCTCGCAGGGTTGATCCAGCCGATGGACCTGGGCGGAGGTCTCAAGTACATGGGCCTGGCACCCGGCGAGATCGGTGAT GACGCCCATGGCTATGCCTGGCTCGATGCCTACCGCCAAGTGCCCAAGGCAGCCGCCTGA
Upstream 100 bases:
>100_bases GCCTCCGTCGATTCGATGCGGTGACTTGGATCGAACGTGTCTGTGTATCAAAGCCCGAGCGCGTTGCCGCTCGGATCTGT CAGGTCTAACGGAGAGAACG
Downstream 100 bases:
>100_bases GCTTCATCGCCGCAACATCAGTTCGACGACCTCACTCCACCGGCGACTTCGGTTCGCCGGGAGTAATCCCTTTTGCCTGA AGGAGCATTCGATGGCCCTT
Product: toluene monooxygenase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MALLERMDWYDLARTTNWTPTYVSEAELFPTEMSGDMGIPMSEWEKYDEPYKQTYSEYVKIQREKDSGAYSVKGALERSK MLENADPGWISVIKAHYGAIARAEYAAASAESRMARFAKAPGQRNMATMGMLDEIRHGQIQLFFPHEHVSKDRQFDWAFK AYDTNEWGAIAARHMFDDMMNTRSAVAIGLMLTFAFETGFTNMQFLGLAADAAEAGDWTFASMISSVQTDESRHAQIGGP LVPILIANGKKAEAQRMIDVAFWRSWKLFTVLTGPMMDYYTPLAHRKQSFKEFMQEFIVTQFERSILDLGLERPWYWDQF LAELDYQHHGMHLGVWFWRPTVWWNPAAGVTPEERAWLEEKYPGWNDTWGKSWDVIVDNLLKDKRELTYPETLPVVCNMC NLPINATPGDPWKVRDHSLERKSRWYHFCSEGCKWCFEQEPERYEGHLSLIDRFLAGLIQPMDLGGGLKYMGLAPGEIGD DAHGYAWLDAYRQVPKAAA
Sequences:
>Translated_499_residues MALLERMDWYDLARTTNWTPTYVSEAELFPTEMSGDMGIPMSEWEKYDEPYKQTYSEYVKIQREKDSGAYSVKGALERSK MLENADPGWISVIKAHYGAIARAEYAAASAESRMARFAKAPGQRNMATMGMLDEIRHGQIQLFFPHEHVSKDRQFDWAFK AYDTNEWGAIAARHMFDDMMNTRSAVAIGLMLTFAFETGFTNMQFLGLAADAAEAGDWTFASMISSVQTDESRHAQIGGP LVPILIANGKKAEAQRMIDVAFWRSWKLFTVLTGPMMDYYTPLAHRKQSFKEFMQEFIVTQFERSILDLGLERPWYWDQF LAELDYQHHGMHLGVWFWRPTVWWNPAAGVTPEERAWLEEKYPGWNDTWGKSWDVIVDNLLKDKRELTYPETLPVVCNMC NLPINATPGDPWKVRDHSLERKSRWYHFCSEGCKWCFEQEPERYEGHLSLIDRFLAGLIQPMDLGGGLKYMGLAPGEIGD DAHGYAWLDAYRQVPKAAA >Mature_498_residues ALLERMDWYDLARTTNWTPTYVSEAELFPTEMSGDMGIPMSEWEKYDEPYKQTYSEYVKIQREKDSGAYSVKGALERSKM LENADPGWISVIKAHYGAIARAEYAAASAESRMARFAKAPGQRNMATMGMLDEIRHGQIQLFFPHEHVSKDRQFDWAFKA YDTNEWGAIAARHMFDDMMNTRSAVAIGLMLTFAFETGFTNMQFLGLAADAAEAGDWTFASMISSVQTDESRHAQIGGPL VPILIANGKKAEAQRMIDVAFWRSWKLFTVLTGPMMDYYTPLAHRKQSFKEFMQEFIVTQFERSILDLGLERPWYWDQFL AELDYQHHGMHLGVWFWRPTVWWNPAAGVTPEERAWLEEKYPGWNDTWGKSWDVIVDNLLKDKRELTYPETLPVVCNMCN LPINATPGDPWKVRDHSLERKSRWYHFCSEGCKWCFEQEPERYEGHLSLIDRFLAGLIQPMDLGGGLKYMGLAPGEIGDD AHGYAWLDAYRQVPKAAA
Specific function: Hydroxylates toluene to form p-cresol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009078 - InterPro: IPR003430 - InterPro: IPR012348 - InterPro: IPR007029 [H]
Pfam domain/function: PF02332 Phenol_Hydrox; PF04945 YHS [H]
EC number: NA
Molecular weight: Translated: 57480; Mature: 57348
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLERMDWYDLARTTNWTPTYVSEAELFPTEMSGDMGIPMSEWEKYDEPYKQTYSEYVK CCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHH IQREKDSGAYSVKGALERSKMLENADPGWISVIKAHYGAIARAEYAAASAESRMARFAKA HHCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGQRNMATMGMLDEIRHGQIQLFFPHEHVSKDRQFDWAFKAYDTNEWGAIAARHMFDDMM CCCCCHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH NTRSAVAIGLMLTFAFETGFTNMQFLGLAADAAEAGDWTFASMISSVQTDESRHAQIGGP HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHCCCC LVPILIANGKKAEAQRMIDVAFWRSWKLFTVLTGPMMDYYTPLAHRKQSFKEFMQEFIVT EEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHH QFERSILDLGLERPWYWDQFLAELDYQHHGMHLGVWFWRPTVWWNPAAGVTPEERAWLEE HHHHHHHHHCCCCCCHHHHHHHHHCHHHCCEEEEEEEECCEEEECCCCCCCCHHHHHHHH KYPGWNDTWGKSWDVIVDNLLKDKRELTYPETLPVVCNMCNLPINATPGDPWKVRDHSLE CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH RKSRWYHFCSEGCKWCFEQEPERYEGHLSLIDRFLAGLIQPMDLGGGLKYMGLAPGEIGD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC DAHGYAWLDAYRQVPKAAA CCCCHHHHHHHHHCCCCCC >Mature Secondary Structure ALLERMDWYDLARTTNWTPTYVSEAELFPTEMSGDMGIPMSEWEKYDEPYKQTYSEYVK CHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHH IQREKDSGAYSVKGALERSKMLENADPGWISVIKAHYGAIARAEYAAASAESRMARFAKA HHCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGQRNMATMGMLDEIRHGQIQLFFPHEHVSKDRQFDWAFKAYDTNEWGAIAARHMFDDMM CCCCCHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH NTRSAVAIGLMLTFAFETGFTNMQFLGLAADAAEAGDWTFASMISSVQTDESRHAQIGGP HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHCCCC LVPILIANGKKAEAQRMIDVAFWRSWKLFTVLTGPMMDYYTPLAHRKQSFKEFMQEFIVT EEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHH QFERSILDLGLERPWYWDQFLAELDYQHHGMHLGVWFWRPTVWWNPAAGVTPEERAWLEE HHHHHHHHHCCCCCCHHHHHHHHHCHHHCCEEEEEEEECCEEEECCCCCCCCHHHHHHHH KYPGWNDTWGKSWDVIVDNLLKDKRELTYPETLPVVCNMCNLPINATPGDPWKVRDHSLE CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH RKSRWYHFCSEGCKWCFEQEPERYEGHLSLIDRFLAGLIQPMDLGGGLKYMGLAPGEIGD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC DAHGYAWLDAYRQVPKAAA CCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1885512 [H]