| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is add [H]
Identifier: 124266002
GI number: 124266002
Start: 847692
End: 848765
Strand: Direct
Name: add [H]
Synonym: Mpe_A0809
Alternate gene names: 124266002
Gene position: 847692-848765 (Clockwise)
Preceding gene: 124266001
Following gene: 124266003
Centisome position: 20.96
GC content: 69.83
Gene sequence:
>1074_bases ATGAACCGACCGACCCGCGCGCTGCCCTTCGACCCGACCCGCGTCGGGCGCGAGGCGTTGCCGGCGTTGCCGGCGCTGCT GCGCGGCATGCCGAAGGCCGAACTGCACATCCACATCGAGGGCTCGCTGGAGCCGGAGCTGATCTTCGCGCTGGCCGGCC GCAACGGCGTCACCTTGCCCTATGCCAGCGTCGATGCGCTGCGCGCGGCCTATGCCTTCACCGACCTGCAGAGCTTCCTC GACATCTACTACGCCGGCGCGAGCGTGCTGCTGGAGGAGGCCGACTTCTTCGACATGGCCATGGCCTACTTCCGCCGTGC CGCCGCGGACCGCGTGGTCCATGCCGAGTTGTTCTTCGACCCGCAGACGCACACCGAGCGCGGGGTGCCGGTCGAGACGG TGATCCGGGGCCTGGCTCGCGCCCGCGCAACGGCGCAGCAGGAACTGGGCGTGAGCAGCGAGCTGATCCTGTGCTTCCTG CGCCACCTCAGCGAGGACGCGGCCTTCCAGACGCTGGAGCAGGCGCTGCCTTACCGCGAGCACTTCATCGGCGTCGGCCT CGACAGCAGCGAGCGCGGGCACCCGCCGGAGAAGTTCGCGCGGGTGTTCGCGCGCTGCCGAGAGCTCGGCCTGCGTCTCG TGGCGCATGCCGGAGAGGAGGGGCCGCCGGCCTATGTGTGGAGTGCGCTCGACGTGTTGAAGGTCGAGCGCATCGACCAC GGCGTGCGCAGCCTCGAGGACCCGGCGCTGGTGGCGCGACTGGCCGCCGAGCGCATGCCGCTGACGGTGTGCCCGCTGTC GAACGTGAAGCTGCGTGTGTTCGACACGATGGCGCAGCACTCGCTCGCGGCGATGCTCGACGCCGGCCTGTGCGCCACCG TCAACTCCGACGACCCGGCCTATTTCGGCGGCTACCTGAACCAGAACTTCATCGAGACCTTCGAGGCGCTGCCGGCACTG GGCGCCGCACAGGCCTACCGGTTGGCACGCAACAGCTTCGAGGCCAGCTTCGCGAGCGCGGCGCAGAAGCAACGGTGGTG CGATGCGCTCGATGCGCATTTCGCGGGGGTGTGA
Upstream 100 bases:
>100_bases TCGGGCTGGCCTGGCGGCGCAGTGGCGTGCGGCTCGCCTGGCGGGCTGGGCCGCATGCCATGCTCGGGCAACCGACAGAC GATCGTGAAGGAGCCGAACG
Downstream 100 bases:
>100_bases AGGAAGCCGCCTGTTGAGTGTTGGCGCGGGCGCCGCGCCGGTCCGCTGTGTTGCGTTCATGTCCTCCGTCCCGGACTCCG TCCGGGCCTCCCCCTTTACT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNRPTRALPFDPTRVGREALPALPALLRGMPKAELHIHIEGSLEPELIFALAGRNGVTLPYASVDALRAAYAFTDLQSFL DIYYAGASVLLEEADFFDMAMAYFRRAAADRVVHAELFFDPQTHTERGVPVETVIRGLARARATAQQELGVSSELILCFL RHLSEDAAFQTLEQALPYREHFIGVGLDSSERGHPPEKFARVFARCRELGLRLVAHAGEEGPPAYVWSALDVLKVERIDH GVRSLEDPALVARLAAERMPLTVCPLSNVKLRVFDTMAQHSLAAMLDAGLCATVNSDDPAYFGGYLNQNFIETFEALPAL GAAQAYRLARNSFEASFASAAQKQRWCDALDAHFAGV
Sequences:
>Translated_357_residues MNRPTRALPFDPTRVGREALPALPALLRGMPKAELHIHIEGSLEPELIFALAGRNGVTLPYASVDALRAAYAFTDLQSFL DIYYAGASVLLEEADFFDMAMAYFRRAAADRVVHAELFFDPQTHTERGVPVETVIRGLARARATAQQELGVSSELILCFL RHLSEDAAFQTLEQALPYREHFIGVGLDSSERGHPPEKFARVFARCRELGLRLVAHAGEEGPPAYVWSALDVLKVERIDH GVRSLEDPALVARLAAERMPLTVCPLSNVKLRVFDTMAQHSLAAMLDAGLCATVNSDDPAYFGGYLNQNFIETFEALPAL GAAQAYRLARNSFEASFASAAQKQRWCDALDAHFAGV >Mature_357_residues MNRPTRALPFDPTRVGREALPALPALLRGMPKAELHIHIEGSLEPELIFALAGRNGVTLPYASVDALRAAYAFTDLQSFL DIYYAGASVLLEEADFFDMAMAYFRRAAADRVVHAELFFDPQTHTERGVPVETVIRGLARARATAQQELGVSSELILCFL RHLSEDAAFQTLEQALPYREHFIGVGLDSSERGHPPEKFARVFARCRELGLRLVAHAGEEGPPAYVWSALDVLKVERIDH GVRSLEDPALVARLAAERMPLTVCPLSNVKLRVFDTMAQHSLAAMLDAGLCATVNSDDPAYFGGYLNQNFIETFEALPAL GAAQAYRLARNSFEASFASAAQKQRWCDALDAHFAGV
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=346, Percent_Identity=24.8554913294798, Blast_Score=109, Evalue=4e-24, Organism=Escherichia coli, GI1787910, Length=322, Percent_Identity=29.5031055900621, Blast_Score=130, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324188, Length=331, Percent_Identity=43.5045317220544, Blast_Score=288, Evalue=1e-78, Organism=Drosophila melanogaster, GI24645260, Length=342, Percent_Identity=25.4385964912281, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 39242; Mature: 39242
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPTRALPFDPTRVGREALPALPALLRGMPKAELHIHIEGSLEPELIFALAGRNGVTLP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC YASVDALRAAYAFTDLQSFLDIYYAGASVLLEEADFFDMAMAYFRRAAADRVVHAELFFD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEEEC PQTHTERGVPVETVIRGLARARATAQQELGVSSELILCFLRHLSEDAAFQTLEQALPYRE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHH HFIGVGLDSSERGHPPEKFARVFARCRELGLRLVAHAGEEGPPAYVWSALDVLKVERIDH HEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GVRSLEDPALVARLAAERMPLTVCPLSNVKLRVFDTMAQHSLAAMLDAGLCATVNSDDPA HHHHCCCHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHCCCEEEECCCCCC YFGGYLNQNFIETFEALPALGAAQAYRLARNSFEASFASAAQKQRWCDALDAHFAGV CCCHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRPTRALPFDPTRVGREALPALPALLRGMPKAELHIHIEGSLEPELIFALAGRNGVTLP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC YASVDALRAAYAFTDLQSFLDIYYAGASVLLEEADFFDMAMAYFRRAAADRVVHAELFFD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHEEEC PQTHTERGVPVETVIRGLARARATAQQELGVSSELILCFLRHLSEDAAFQTLEQALPYRE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHH HFIGVGLDSSERGHPPEKFARVFARCRELGLRLVAHAGEEGPPAYVWSALDVLKVERIDH HEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH GVRSLEDPALVARLAAERMPLTVCPLSNVKLRVFDTMAQHSLAAMLDAGLCATVNSDDPA HHHHCCCHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHCCCEEEECCCCCC YFGGYLNQNFIETFEALPALGAAQAYRLARNSFEASFASAAQKQRWCDALDAHFAGV CCCHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA