| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is guaD [H]
Identifier: 124265994
GI number: 124265994
Start: 838538
End: 839875
Strand: Direct
Name: guaD [H]
Synonym: Mpe_A0801
Alternate gene names: 124265994
Gene position: 838538-839875 (Clockwise)
Preceding gene: 124265993
Following gene: 124265995
Centisome position: 20.73
GC content: 72.12
Gene sequence:
>1338_bases ATGAGCCAAAGGCTGGCCCTGTTCGGCGACCTGCTCGACATCGAGGTCGACCCCGGCTTCGCTGCCCCTGGCGACGCCGC CGGCGTGCGCTACCGGCCCGACCACTGGCTGCTGGTCGAGGACGGCCGCATCGTCGGTGCCGAGCCGGCCCGCGCCGGCA GCGGCCCCGACGCGAGCTGGCAGCGTGTGGACCACGCCGGGCGGCTGATCACGCCGGGCTTCATCGACACCCATGTGCAC TGCCCGCAGCTCGACGTGATCGCGAGCTACGGCACCGCGTTGCTCGAGTGGCTGAACACCTACACCTTCCCGGCCGAGCT GCGCTATGCCGATCCGCTGGTGGCGGCCAGCGGTGCCGAGCGCTTCGTCGATGCGCTGCTGGCGCACGGCACCACCTCGG CGGTGGTGTTCCCGACTGTCCACAAGGGCGCGACCGAGGCGCTGTTCACCTCGGCCCGCGCACGCGGCATGCGGCTGGTG GCCGGCAAGGTGCTGATGGACCGCCACGCGCCCGACGGCCTGCGCGACGACGTGCTGCAGGCCGAGCGAGATTGCGCCGA TCTGATCGCGCGCTGGCACGGCAACGGCCGCCTGTCGTACGCGGTGACGGTGCGCTTCGCGGCCACCAGCACGCCGGAGC AGCTGGCGATGGCCGGTCGGCTGTGCCGCGAACACCCGGGCGTGTACATGCAGACCCACGTGGCCGAGAACACCGACGAG GTGCGCTGGATCGCCGAGCTGTTCCCCGAGGCTCGCAGCTACCTCGATGTCTACCACCGGCACGGTCTGCTGCACGAGCG CGCGGTGCTGGCGCACGGCATCTGGCTCGACGACACCGACCGCGCGTTGCTGCGCGACACCGGTGCGCAGATCGCCTTCT GCCCGTCGAGCAACCTGTTCCTCGGCAGTGGTTTGTTCGACTGGCAGGCCGCGGTCGACACCGGCTACCGCGTGTCGATG GCCAGCGACGTGGGCGGCGGCACCAGCCTGTCGATGCTGCGCACGCTGGCCGATGCCTACAAGGTGCAGGCGCTGCGCGG CGTGAAGCTCAGCGCCTGGAAGGCGCTGCATGCCGCGACGCGCGGCGCCGCCGAGGCGCTGGGCCTGGCGCACGAGATGG GTCACCTCGGACATGGTGCGCTGGCTGACCTGGCGGTGTGGGACTGGGCGGTCGGCCCGGTCGCCACGCACCGCGATGCG GTGGCGCGCCGCGGTCGTGCCGGCGTGTCGCCGCTGACTGCGCTGCACGAGCGCGTGTTCGCGTGGATGACGCTAGGCGA CGAGCGCAATCTCGTCGCGACCTACGTGGCCGGCGCGTGCCGCCACGAGCGCGGCTGA
Upstream 100 bases:
>100_bases CTGCGCGGCGTGATGCGCGATGTGGCGCGCGGCCTGCCGAAGCCGGGTGCCGCGGCCCCGCGCGCCGGCGCTCACTGATG ACCACGCAAGGGAGCACCGC
Downstream 100 bases:
>100_bases GCGCGGAGGCGCGGGCTCGTAGAGCACGGGTCGCATCGGCGGGCGAATGGATTCGTTGTTGGATTCAACATGGTGCACGA ATTGGTATACCAAAAGTGTG
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSQRLALFGDLLDIEVDPGFAAPGDAAGVRYRPDHWLLVEDGRIVGAEPARAGSGPDASWQRVDHAGRLITPGFIDTHVH CPQLDVIASYGTALLEWLNTYTFPAELRYADPLVAASGAERFVDALLAHGTTSAVVFPTVHKGATEALFTSARARGMRLV AGKVLMDRHAPDGLRDDVLQAERDCADLIARWHGNGRLSYAVTVRFAATSTPEQLAMAGRLCREHPGVYMQTHVAENTDE VRWIAELFPEARSYLDVYHRHGLLHERAVLAHGIWLDDTDRALLRDTGAQIAFCPSSNLFLGSGLFDWQAAVDTGYRVSM ASDVGGGTSLSMLRTLADAYKVQALRGVKLSAWKALHAATRGAAEALGLAHEMGHLGHGALADLAVWDWAVGPVATHRDA VARRGRAGVSPLTALHERVFAWMTLGDERNLVATYVAGACRHERG
Sequences:
>Translated_445_residues MSQRLALFGDLLDIEVDPGFAAPGDAAGVRYRPDHWLLVEDGRIVGAEPARAGSGPDASWQRVDHAGRLITPGFIDTHVH CPQLDVIASYGTALLEWLNTYTFPAELRYADPLVAASGAERFVDALLAHGTTSAVVFPTVHKGATEALFTSARARGMRLV AGKVLMDRHAPDGLRDDVLQAERDCADLIARWHGNGRLSYAVTVRFAATSTPEQLAMAGRLCREHPGVYMQTHVAENTDE VRWIAELFPEARSYLDVYHRHGLLHERAVLAHGIWLDDTDRALLRDTGAQIAFCPSSNLFLGSGLFDWQAAVDTGYRVSM ASDVGGGTSLSMLRTLADAYKVQALRGVKLSAWKALHAATRGAAEALGLAHEMGHLGHGALADLAVWDWAVGPVATHRDA VARRGRAGVSPLTALHERVFAWMTLGDERNLVATYVAGACRHERG >Mature_444_residues SQRLALFGDLLDIEVDPGFAAPGDAAGVRYRPDHWLLVEDGRIVGAEPARAGSGPDASWQRVDHAGRLITPGFIDTHVHC PQLDVIASYGTALLEWLNTYTFPAELRYADPLVAASGAERFVDALLAHGTTSAVVFPTVHKGATEALFTSARARGMRLVA GKVLMDRHAPDGLRDDVLQAERDCADLIARWHGNGRLSYAVTVRFAATSTPEQLAMAGRLCREHPGVYMQTHVAENTDEV RWIAELFPEARSYLDVYHRHGLLHERAVLAHGIWLDDTDRALLRDTGAQIAFCPSSNLFLGSGLFDWQAAVDTGYRVSMA SDVGGGTSLSMLRTLADAYKVQALRGVKLSAWKALHAATRGAAEALGLAHEMGHLGHGALADLAVWDWAVGPVATHRDAV ARRGRAGVSPLTALHERVFAWMTLGDERNLVATYVAGACRHERG
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=434, Percent_Identity=28.8018433179723, Blast_Score=179, Evalue=4e-45, Organism=Escherichia coli, GI1789249, Length=422, Percent_Identity=43.1279620853081, Blast_Score=353, Evalue=1e-98, Organism=Saccharomyces cerevisiae, GI6319963, Length=391, Percent_Identity=29.923273657289, Blast_Score=182, Evalue=6e-47, Organism=Drosophila melanogaster, GI24643849, Length=397, Percent_Identity=32.9974811083123, Blast_Score=179, Evalue=4e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 48196; Mature: 48065
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRLALFGDLLDIEVDPGFAAPGDAAGVRYRPDHWLLVEDGRIVGAEPARAGSGPDASW CCCCCEECCCEEEEEECCCCCCCCCCCCCEECCCEEEEEECCEEECCCCCCCCCCCCCHH QRVDHAGRLITPGFIDTHVHCPQLDVIASYGTALLEWLNTYTFPAELRYADPLVAASGAE HHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHH RFVDALLAHGTTSAVVFPTVHKGATEALFTSARARGMRLVAGKVLMDRHAPDGLRDDVLQ HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEHHHHHHHCCCCCCHHHHHHH AERDCADLIARWHGNGRLSYAVTVRFAATSTPEQLAMAGRLCREHPGVYMQTHVAENTDE HHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH VRWIAELFPEARSYLDVYHRHGLLHERAVLAHGIWLDDTDRALLRDTGAQIAFCPSSNLF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCHHHHHCCCCEEEECCCCCEE LGSGLFDWQAAVDTGYRVSMASDVGGGTSLSMLRTLADAYKVQALRGVKLSAWKALHAAT EECCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RGAAEALGLAHEMGHLGHGALADLAVWDWAVGPVATHRDAVARRGRAGVSPLTALHERVF HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH AWMTLGDERNLVATYVAGACRHERG EEEEECCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SQRLALFGDLLDIEVDPGFAAPGDAAGVRYRPDHWLLVEDGRIVGAEPARAGSGPDASW CCCCEECCCEEEEEECCCCCCCCCCCCCEECCCEEEEEECCEEECCCCCCCCCCCCCHH QRVDHAGRLITPGFIDTHVHCPQLDVIASYGTALLEWLNTYTFPAELRYADPLVAASGAE HHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHH RFVDALLAHGTTSAVVFPTVHKGATEALFTSARARGMRLVAGKVLMDRHAPDGLRDDVLQ HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEHHHHHHHCCCCCCHHHHHHH AERDCADLIARWHGNGRLSYAVTVRFAATSTPEQLAMAGRLCREHPGVYMQTHVAENTDE HHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH VRWIAELFPEARSYLDVYHRHGLLHERAVLAHGIWLDDTDRALLRDTGAQIAFCPSSNLF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCHHHHHCCCCEEEECCCCCEE LGSGLFDWQAAVDTGYRVSMASDVGGGTSLSMLRTLADAYKVQALRGVKLSAWKALHAAT EECCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RGAAEALGLAHEMGHLGHGALADLAVWDWAVGPVATHRDAVARRGRAGVSPLTALHERVF HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH AWMTLGDERNLVATYVAGACRHERG EEEEECCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]