Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265970

Identifier: 124265970

GI number: 124265970

Start: 812149

End: 813093

Strand: Reverse

Name: 124265970

Synonym: Mpe_A0777

Alternate gene names: NA

Gene position: 813093-812149 (Counterclockwise)

Preceding gene: 124265971

Following gene: 124265969

Centisome position: 20.11

GC content: 69.21

Gene sequence:

>945_bases
ATGGACCCGACCCCTGCCCCCTATCCCCGCGACCTGCGCGGCTACGGCCGCGACGTCCCGCACGCGCGCTGGCCCGGCGG
CGCGAAGATCGCGGTGCAGTTCGTGCTCAATTACGAGGAAGGCGGCGAGAACAGCCCGCTGCACGGCGACCCCACCTCCG
AGACCTTCCTGTCCGAGCTGATCACCGCGCAGGCCTACGAGAACCGCCACATGACCATGGAGTCGATGTACGAGTACGGC
TCGCGCGTCGGCGTGTGGCGCATCCTGCGCGAGTTCGAGAAGCGCCGCCTGCCGCTCACGGTGTTCGGCGTCGGCATGGC
GCTGCAGCGCTATCCGGAGCTGCTGGCCGCCTTCATGGAAAGCGGCTACGAGATCGCCAACCACGGCCTGCGCTGGATCC
ACTACCAGAACCTGCCCGAGGCGACCGAGCGCCGCCACATCGGCATCGGCACCCAGCTGCTGCGCGAGCTGACCGGCGGC
GCCTGGCCGCTCGGCTGGTACACCGGTCGCGACAGCCCCAACACGCGCCGGCTCGTCGCCGACCAGGGCGGCTACGAATA
CGACAGCGACTACTACGGCGACGACCTGCCGTTCTGGACCGAGGTCGAAAAGACCGACGGCACCCGCGTGCCCCACCTCG
TGGTGCCCTACTCGCTCGACACCAACGACATGCGCTTCGTGCAGGCGCAGGGCTTCAACACCGGCGAGCACTTCTTCACC
TACCTGCGCGACAGCTTCGACGCGCTCTACGCCGAGGGCGAGGACGCACCCAAGATGATGTCGATCGGCATGCACTGCCG
CCTGCTCGGCAAGCCCGGGCGCATCGGCGCGCTGCAGCGCTTCCTCGACCACATCGAGGCGCACGACCGCGTCTGGGTGT
GCCGGCGCATCGACATCGCGCGGCACTGGCAGGCCACCCACCCCTGCGCGAAGGCCTCCACGTGA

Upstream 100 bases:

>100_bases
AACCTGCGTCTCAACCCGCGCGTCCACGACCTCGACGCCGCGTTGCGGCCGGCCGGCTGAGCCGCCGCACTGCGCTCGCT
TCTTGCAAGGCCTGCCCACC

Downstream 100 bases:

>100_bases
CCACCGCTGCCCCCACCCCGCTGACGCTCGCCTGGCTCAACGATGCGCCGGCCGAGGCGGCGCTGGCCGCGCTCGACGGG
CTCTACGAGCACTCGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Deacetylase

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MDPTPAPYPRDLRGYGRDVPHARWPGGAKIAVQFVLNYEEGGENSPLHGDPTSETFLSELITAQAYENRHMTMESMYEYG
SRVGVWRILREFEKRRLPLTVFGVGMALQRYPELLAAFMESGYEIANHGLRWIHYQNLPEATERRHIGIGTQLLRELTGG
AWPLGWYTGRDSPNTRRLVADQGGYEYDSDYYGDDLPFWTEVEKTDGTRVPHLVVPYSLDTNDMRFVQAQGFNTGEHFFT
YLRDSFDALYAEGEDAPKMMSIGMHCRLLGKPGRIGALQRFLDHIEAHDRVWVCRRIDIARHWQATHPCAKAST

Sequences:

>Translated_314_residues
MDPTPAPYPRDLRGYGRDVPHARWPGGAKIAVQFVLNYEEGGENSPLHGDPTSETFLSELITAQAYENRHMTMESMYEYG
SRVGVWRILREFEKRRLPLTVFGVGMALQRYPELLAAFMESGYEIANHGLRWIHYQNLPEATERRHIGIGTQLLRELTGG
AWPLGWYTGRDSPNTRRLVADQGGYEYDSDYYGDDLPFWTEVEKTDGTRVPHLVVPYSLDTNDMRFVQAQGFNTGEHFFT
YLRDSFDALYAEGEDAPKMMSIGMHCRLLGKPGRIGALQRFLDHIEAHDRVWVCRRIDIARHWQATHPCAKAST
>Mature_314_residues
MDPTPAPYPRDLRGYGRDVPHARWPGGAKIAVQFVLNYEEGGENSPLHGDPTSETFLSELITAQAYENRHMTMESMYEYG
SRVGVWRILREFEKRRLPLTVFGVGMALQRYPELLAAFMESGYEIANHGLRWIHYQNLPEATERRHIGIGTQLLRELTGG
AWPLGWYTGRDSPNTRRLVADQGGYEYDSDYYGDDLPFWTEVEKTDGTRVPHLVVPYSLDTNDMRFVQAQGFNTGEHFFT
YLRDSFDALYAEGEDAPKMMSIGMHCRLLGKPGRIGALQRFLDHIEAHDRVWVCRRIDIARHWQATHPCAKAST

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36003; Mature: 36003

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPTPAPYPRDLRGYGRDVPHARWPGGAKIAVQFVLNYEEGGENSPLHGDPTSETFLSEL
CCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
ITAQAYENRHMTMESMYEYGSRVGVWRILREFEKRRLPLTVFGVGMALQRYPELLAAFME
HHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
SGYEIANHGLRWIHYQNLPEATERRHIGIGTQLLRELTGGAWPLGWYTGRDSPNTRRLVA
CCHHHHHCCEEEEEECCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEE
DQGGYEYDSDYYGDDLPFWTEVEKTDGTRVPHLVVPYSLDTNDMRFVQAQGFNTGEHFFT
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHH
YLRDSFDALYAEGEDAPKMMSIGMHCRLLGKPGRIGALQRFLDHIEAHDRVWVCRRIDIA
HHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEHHHHHH
RHWQATHPCAKAST
HHHHCCCCCCCCCC
>Mature Secondary Structure
MDPTPAPYPRDLRGYGRDVPHARWPGGAKIAVQFVLNYEEGGENSPLHGDPTSETFLSEL
CCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHH
ITAQAYENRHMTMESMYEYGSRVGVWRILREFEKRRLPLTVFGVGMALQRYPELLAAFME
HHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH
SGYEIANHGLRWIHYQNLPEATERRHIGIGTQLLRELTGGAWPLGWYTGRDSPNTRRLVA
CCHHHHHCCEEEEEECCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCEEEE
DQGGYEYDSDYYGDDLPFWTEVEKTDGTRVPHLVVPYSLDTNDMRFVQAQGFNTGEHFFT
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHH
YLRDSFDALYAEGEDAPKMMSIGMHCRLLGKPGRIGALQRFLDHIEAHDRVWVCRRIDIA
HHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEHHHHHH
RHWQATHPCAKAST
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA