| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is malT [H]
Identifier: 124265956
GI number: 124265956
Start: 793506
End: 796265
Strand: Direct
Name: malT [H]
Synonym: Mpe_A0763
Alternate gene names: 124265956
Gene position: 793506-796265 (Clockwise)
Preceding gene: 124265952
Following gene: 124265972
Centisome position: 19.62
GC content: 76.96
Gene sequence:
>2760_bases ATGGCTCTTCGCGCCGCGGCGGCGTGCCGGCTTCCTAGAATCGGGCAGCCTTCCGCGCTGTTGCGGTGGCCGCTGCCGCC GCCGCTGTCGCTGCTGTCCATGGACAACACCCGCAACGCCTCCGCTGCCCCCGCCTCCAGCAAGCACCGCATCCCGCGCG CACGGCGCGACGTGGTGCCGCGCCCGGCGCTGCTGGCGCCGGTGCTGGAGCAGGCGGCCGACGCCCGGCTGGTGCTGGTG CAGGCGCCGGCCGGCTTCGGCAAGACCACGCTGCTGGTGCAGCTGGCCGCAGCGCTGGCGACGGCCGCGTCCGGCGCGCA GGTGGTGTGGGTCTCGCTCGATGCCGAGGACAACGACGCCAACCGCCTGTTCGCGGCGCTGTTCGGGGCGCTCGCGCCGC TCGATCTGCCGTGGGCCGTGCCGCCCGCCACGGTGCTGGCCCAGTTGCAGGACGCCAGCCCCGCCGCGCGCACCGCGCTG GGCCTGCTGACCGACGCGCTCGGGGTCCGGCCCGAGTCGCGCATCGCGCTGGTGCTGGACGACCTTCACCACGTCACCGA CGCGGCGGCGCTGCAGCTGCTCGACACGCTGATCGCCCGCGCGCCGCCGGAGCTCTGTCTCCTCATCGGCAGCCGCACCG CGCCGCCGCTGTCGCTGGCGCGCTGGCGTGCCGGCGGCGAGCTGGTGGAGCTGGGCCTGGAGGACCTGCGATTCGACCTC GGCGCTGCGCAGGCGCTGTGCCGGCTGCGCGGGCTGCAGGCGCCGTCCGACGCGGCGCTGCAGGCCGCGCTCGCTCGCAC CCACGGCTGGGTGGCCGGCCTGCACCTGCTGCTGGGCAGCGCGCGCGCCGGCACGGGCAGCCTGCCCGCGCTCGCCGGTC CGGCGGCCCACCGCCACCTGTTCGACTATTTCGCGCAGGAGGTGCTGGCCGGGCTGCCGCCGCCGCTGCAGCAGTTCGTG CTGTACGGCAGCGTGCTGCCCGAGCTCAGCCCCGCGCTGTGCCAGGCCGTCACCGGCCGCGACGACGCCCGCGCGGTGCT CGACGACCTGTTCGGTCGCCAGCTCTTCCTCAGCGCGCTCGACGACACCGTGCCGGTGCTGCGCTTCCACGACCTGTTCC GCGATTTCCTGCGCGGCGAGCTGGAGCGGCGCGAGCCCGGGCACGCCGCCGCGCTGCATGCGCTGGCCGCTGCCGCCGAG ACGCGCGCCGAGCGCGCCGTGCCGCACTGGCTGGCCGCCGGGCGCTGGGCCGAGGCCCTGGCCGCACTGCGCCAGATGGC CGACGGCCTGCTGGCCGTGGGCGGCACGCACCGCCTGGAGCGCTGGCTGGATCAGTTGCCGCTGGCGTGGCGCGAGGCGC AGGCCGACGCGGCGCTGCTGCGCGGCCTGTGCGCGTGGTCGCGCTGGGACTGGGGCCTGGCCCGCGACGAATTCCAGCGC AGCCACGACGCCTATGCGCAGCAAGGCCGGCCGCGCGATCGCTACGTTGCGCTGGGCATGCTGGGTGCCTGCCACAACGC GCTGGGCGAGCTGGACCGGGCCGAGGCCGTGCTCGCCGACGCGGCCGACGCACCGCTGCCGCCGGCGCTGCAGGTGGCCT TCGATTCGCTGCAGGCCTGGCACGGCGTGGCGCGCGGCGACGGCGCAGCCGTGCTGACCGGCCTTGCCGCGATGGCCGAC AACGCGGCGCGGGCCCCCGAGGCGCGCTACCCGAACATCGTCGACATGAGCTACGGGCACTTCACCGGCCTGCCCGGCAC GCGACCGCTGATGGAGCGGCTGGGCCGGCTGTGCCGCGCCGACCAGCCGGGCGGCGAGGTGCAGGTGCCGGCGCTGCATG CCTGGCTGGCGTTCTGGCACGGCGAGCCCGGCACGGCCCGCGAGGCCTTACACGAGCTGCTGCAGCGGCAGCGCCAGCTG CCCGGCGACACCATGCTCGGCATCGGCGCGCTGCACCTGCACAGCCTGCACCTCGCCGCGCAGGGCCACACGGCCGAGGC GCTGGCCGCCATCGCCCAGGTGCCCGCTCTCATGACGCCGGGTTTCAGCCGGGGCTGGCGGCGCACCTATGCGCATGTGC AGGCCCGCCTCCACTGGCGCGCCGGGGACGCCGACGGCCTGGCCGCGCTGCTGCCCGATCTGTCGCGGCCGCGCTCGGCG CGCGAATGGCCGGTGCTGGACACCGGCGCCCCGCTGCTGCAGGGCCAGCATGCGCTGCTGTGCGGTGAGCTGGCCGCAGC GCGCGCGCACCTGGAGCGCGCCGCGCTGCTGCAGGCTGGCGCGCGGCTGCCGGCCTTCATGGGCGACGCCCGCTGCGCGC TGGCGCTGTGCCGCGCCGCGCAGGGCGAGCCCGAGGCGGCCGCCGCAGCGCTGGACGATCTGCTGTGCGAGGCGGTGCAG GACGACGGCCTCGGCAGCCTGCTGCTGGAGCCGCCGGCCCGGCTGCAGGCGCTGTGGCAGGCGCTGGCGCCGCGCCTGCG CTGCCCGGCCGCGGCGCAGGCCCGGCTGCGCGGCCGCCTCGCGGCCTGGCTGGCCGAGGGCCCGCGCGCCGCCGTGGCCG ACGCAGCGCCGCCGGACGATCCGCTGTCGGCCCGCGAGCGCGAGGTGATGGCCCTGCTGGCCGAGGGCCAGAGCAACAAG CTCATCGCCCGCGCGCTCGGCCTCAGCCTGCACACCGTGAAGCGTCACGTGGCCAACATCCTCACCAAGCTGGCGCTCGA CAGCCGCACCCAGGCGGCGGCCTACTGGCACCGGCGCTGA
Upstream 100 bases:
>100_bases GTCCGTCAGAAGAAGGAATGAAGGAAGGAGCCGCCAGTGTTGCGAGCCACCGCCGCGCCGGCATCGCTCCGGAGAGCCAT GGCGCCATCGCCGCACGCGG
Downstream 100 bases:
>100_bases GCCTTGTTGCGTGCGTTGCCGCTGCAGGCGCTGCCCGCTGGGGGCTCCTGCTGGGGCGGTCGGCCTGGCAGGCCGACTGC ACTGCGATGCTCGCGCCAGG
Product: ATP-dependent transcriptional regulator-like protein
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 919; Mature: 918
Protein sequence:
>919_residues MALRAAAACRLPRIGQPSALLRWPLPPPLSLLSMDNTRNASAAPASSKHRIPRARRDVVPRPALLAPVLEQAADARLVLV QAPAGFGKTTLLVQLAAALATAASGAQVVWVSLDAEDNDANRLFAALFGALAPLDLPWAVPPATVLAQLQDASPAARTAL GLLTDALGVRPESRIALVLDDLHHVTDAAALQLLDTLIARAPPELCLLIGSRTAPPLSLARWRAGGELVELGLEDLRFDL GAAQALCRLRGLQAPSDAALQAALARTHGWVAGLHLLLGSARAGTGSLPALAGPAAHRHLFDYFAQEVLAGLPPPLQQFV LYGSVLPELSPALCQAVTGRDDARAVLDDLFGRQLFLSALDDTVPVLRFHDLFRDFLRGELERREPGHAAALHALAAAAE TRAERAVPHWLAAGRWAEALAALRQMADGLLAVGGTHRLERWLDQLPLAWREAQADAALLRGLCAWSRWDWGLARDEFQR SHDAYAQQGRPRDRYVALGMLGACHNALGELDRAEAVLADAADAPLPPALQVAFDSLQAWHGVARGDGAAVLTGLAAMAD NAARAPEARYPNIVDMSYGHFTGLPGTRPLMERLGRLCRADQPGGEVQVPALHAWLAFWHGEPGTAREALHELLQRQRQL PGDTMLGIGALHLHSLHLAAQGHTAEALAAIAQVPALMTPGFSRGWRRTYAHVQARLHWRAGDADGLAALLPDLSRPRSA REWPVLDTGAPLLQGQHALLCGELAAARAHLERAALLQAGARLPAFMGDARCALALCRAAQGEPEAAAAALDDLLCEAVQ DDGLGSLLLEPPARLQALWQALAPRLRCPAAAQARLRGRLAAWLAEGPRAAVADAAPPDDPLSAREREVMALLAEGQSNK LIARALGLSLHTVKRHVANILTKLALDSRTQAAAYWHRR
Sequences:
>Translated_919_residues MALRAAAACRLPRIGQPSALLRWPLPPPLSLLSMDNTRNASAAPASSKHRIPRARRDVVPRPALLAPVLEQAADARLVLV QAPAGFGKTTLLVQLAAALATAASGAQVVWVSLDAEDNDANRLFAALFGALAPLDLPWAVPPATVLAQLQDASPAARTAL GLLTDALGVRPESRIALVLDDLHHVTDAAALQLLDTLIARAPPELCLLIGSRTAPPLSLARWRAGGELVELGLEDLRFDL GAAQALCRLRGLQAPSDAALQAALARTHGWVAGLHLLLGSARAGTGSLPALAGPAAHRHLFDYFAQEVLAGLPPPLQQFV LYGSVLPELSPALCQAVTGRDDARAVLDDLFGRQLFLSALDDTVPVLRFHDLFRDFLRGELERREPGHAAALHALAAAAE TRAERAVPHWLAAGRWAEALAALRQMADGLLAVGGTHRLERWLDQLPLAWREAQADAALLRGLCAWSRWDWGLARDEFQR SHDAYAQQGRPRDRYVALGMLGACHNALGELDRAEAVLADAADAPLPPALQVAFDSLQAWHGVARGDGAAVLTGLAAMAD NAARAPEARYPNIVDMSYGHFTGLPGTRPLMERLGRLCRADQPGGEVQVPALHAWLAFWHGEPGTAREALHELLQRQRQL PGDTMLGIGALHLHSLHLAAQGHTAEALAAIAQVPALMTPGFSRGWRRTYAHVQARLHWRAGDADGLAALLPDLSRPRSA REWPVLDTGAPLLQGQHALLCGELAAARAHLERAALLQAGARLPAFMGDARCALALCRAAQGEPEAAAAALDDLLCEAVQ DDGLGSLLLEPPARLQALWQALAPRLRCPAAAQARLRGRLAAWLAEGPRAAVADAAPPDDPLSAREREVMALLAEGQSNK LIARALGLSLHTVKRHVANILTKLALDSRTQAAAYWHRR >Mature_918_residues ALRAAAACRLPRIGQPSALLRWPLPPPLSLLSMDNTRNASAAPASSKHRIPRARRDVVPRPALLAPVLEQAADARLVLVQ APAGFGKTTLLVQLAAALATAASGAQVVWVSLDAEDNDANRLFAALFGALAPLDLPWAVPPATVLAQLQDASPAARTALG LLTDALGVRPESRIALVLDDLHHVTDAAALQLLDTLIARAPPELCLLIGSRTAPPLSLARWRAGGELVELGLEDLRFDLG AAQALCRLRGLQAPSDAALQAALARTHGWVAGLHLLLGSARAGTGSLPALAGPAAHRHLFDYFAQEVLAGLPPPLQQFVL YGSVLPELSPALCQAVTGRDDARAVLDDLFGRQLFLSALDDTVPVLRFHDLFRDFLRGELERREPGHAAALHALAAAAET RAERAVPHWLAAGRWAEALAALRQMADGLLAVGGTHRLERWLDQLPLAWREAQADAALLRGLCAWSRWDWGLARDEFQRS HDAYAQQGRPRDRYVALGMLGACHNALGELDRAEAVLADAADAPLPPALQVAFDSLQAWHGVARGDGAAVLTGLAAMADN AARAPEARYPNIVDMSYGHFTGLPGTRPLMERLGRLCRADQPGGEVQVPALHAWLAFWHGEPGTAREALHELLQRQRQLP GDTMLGIGALHLHSLHLAAQGHTAEALAAIAQVPALMTPGFSRGWRRTYAHVQARLHWRAGDADGLAALLPDLSRPRSAR EWPVLDTGAPLLQGQHALLCGELAAARAHLERAALLQAGARLPAFMGDARCALALCRAAQGEPEAAAAALDDLLCEAVQD DGLGSLLLEPPARLQALWQALAPRLRCPAAAQARLRGRLAAWLAEGPRAAVADAAPPDDPLSAREREVMALLAEGQSNKL IARALGLSLHTVKRHVANILTKLALDSRTQAAAYWHRR
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=365, Percent_Identity=31.5068493150685, Blast_Score=130, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 97967; Mature: 97835
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRAAAACRLPRIGQPSALLRWPLPPPLSLLSMDNTRNASAAPASSKHRIPRARRDVVP CCCCHHHHHCCCCCCCCCCEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCHHHHCCCC RPALLAPVLEQAADARLVLVQAPAGFGKTTLLVQLAAALATAASGAQVVWVSLDAEDNDA CCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH NRLFAALFGALAPLDLPWAVPPATVLAQLQDASPAARTALGLLTDALGVRPESRIALVLD HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHHH DLHHVTDAAALQLLDTLIARAPPELCLLIGSRTAPPLSLARWRAGGELVELGLEDLRFDL HHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHCCCCHHHHHCHHHHHHHH GAAQALCRLRGLQAPSDAALQAALARTHGWVAGLHLLLGSARAGTGSLPALAGPAAHRHL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH FDYFAQEVLAGLPPPLQQFVLYGSVLPELSPALCQAVTGRDDARAVLDDLFGRQLFLSAL HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DDTVPVLRFHDLFRDFLRGELERREPGHAAALHALAAAAETRAERAVPHWLAAGRWAEAL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AALRQMADGLLAVGGTHRLERWLDQLPLAWREAQADAALLRGLCAWSRWDWGLARDEFQR HHHHHHHHHHEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SHDAYAQQGRPRDRYVALGMLGACHNALGELDRAEAVLADAADAPLPPALQVAFDSLQAW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH HGVARGDGAAVLTGLAAMADNAARAPEARYPNIVDMSYGHFTGLPGTRPLMERLGRLCRA HCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCC DQPGGEVQVPALHAWLAFWHGEPGTAREALHELLQRQRQLPGDTMLGIGALHLHSLHLAA CCCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC QGHTAEALAAIAQVPALMTPGFSRGWRRTYAHVQARLHWRAGDADGLAALLPDLSRPRSA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCC REWPVLDTGAPLLQGQHALLCGELAAARAHLERAALLQAGARLPAFMGDARCALALCRAA CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHC QGEPEAAAAALDDLLCEAVQDDGLGSLLLEPPARLQALWQALAPRLRCPAAAQARLRGRL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH AAWLAEGPRAAVADAAPPDDPLSAREREVMALLAEGQSNKLIARALGLSLHTVKRHVANI HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LTKLALDSRTQAAAYWHRR HHHHHHCCCHHHHHHHCCC >Mature Secondary Structure ALRAAAACRLPRIGQPSALLRWPLPPPLSLLSMDNTRNASAAPASSKHRIPRARRDVVP CCCHHHHHCCCCCCCCCCEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCHHHHCCCC RPALLAPVLEQAADARLVLVQAPAGFGKTTLLVQLAAALATAASGAQVVWVSLDAEDNDA CCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH NRLFAALFGALAPLDLPWAVPPATVLAQLQDASPAARTALGLLTDALGVRPESRIALVLD HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEHHHH DLHHVTDAAALQLLDTLIARAPPELCLLIGSRTAPPLSLARWRAGGELVELGLEDLRFDL HHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHCCCCHHHHHCHHHHHHHH GAAQALCRLRGLQAPSDAALQAALARTHGWVAGLHLLLGSARAGTGSLPALAGPAAHRHL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH FDYFAQEVLAGLPPPLQQFVLYGSVLPELSPALCQAVTGRDDARAVLDDLFGRQLFLSAL HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH DDTVPVLRFHDLFRDFLRGELERREPGHAAALHALAAAAETRAERAVPHWLAAGRWAEAL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AALRQMADGLLAVGGTHRLERWLDQLPLAWREAQADAALLRGLCAWSRWDWGLARDEFQR HHHHHHHHHHEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SHDAYAQQGRPRDRYVALGMLGACHNALGELDRAEAVLADAADAPLPPALQVAFDSLQAW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH HGVARGDGAAVLTGLAAMADNAARAPEARYPNIVDMSYGHFTGLPGTRPLMERLGRLCRA HCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCC DQPGGEVQVPALHAWLAFWHGEPGTAREALHELLQRQRQLPGDTMLGIGALHLHSLHLAA CCCCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC QGHTAEALAAIAQVPALMTPGFSRGWRRTYAHVQARLHWRAGDADGLAALLPDLSRPRSA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCCCCC REWPVLDTGAPLLQGQHALLCGELAAARAHLERAALLQAGARLPAFMGDARCALALCRAA CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHC QGEPEAAAAALDDLLCEAVQDDGLGSLLLEPPARLQALWQALAPRLRCPAAAQARLRGRL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH AAWLAEGPRAAVADAAPPDDPLSAREREVMALLAEGQSNKLIARALGLSLHTVKRHVANI HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LTKLALDSRTQAAAYWHRR HHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA