| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is mcp [H]
Identifier: 124265943
GI number: 124265943
Start: 778062
End: 779840
Strand: Reverse
Name: mcp [H]
Synonym: Mpe_A0750
Alternate gene names: 124265943
Gene position: 779840-778062 (Counterclockwise)
Preceding gene: 124265944
Following gene: 124265942
Centisome position: 19.28
GC content: 70.21
Gene sequence:
>1779_bases ATGAAACTGAGCGACATGAAGATCTCGACCCGGCTGATGCTGGGCTTTGCGGCGATGGCCGTGCTGATGAGCCTGCTGGG CGCACTGGCCATCATCAAGGTGACGGCCATCCAGGGCAAGTTCGCCGACGTGATGGACGACCGCTACCCGAAGATCCAGA CCGCCGGTGACATCCGCACGGTGAACAACGAGGTCTCGCTGGCGATCCGCAACCTGTTCGTGGTGAGCGAGCCGGCTGAC GTGCAGGCCCAGTTCGACGTGATCGCCAACAGCAGCAAGCGCACCAACGCGAACATCGACACGCTCCAGCGCAGCATCAC CAGCGCGCAGGGCAAGGCGGCGCTCGACAAGCTGATGGCCGCGCGCGCCGACTACCGCGGCCCGCGCGACAAGGTGCTGG AGCTGCTGCGCGCCGGCCAGATGGACGAGGCCAAGCTCGTGCTGGTGCGCGAGGTGACGCCCAAGCAGGTCGCCTACATG GCCCGCCTCGACGAGCTGATCCAGCTCCAGGAGAACCTGATGACGGCCTCGGCCGACGAGGTGAGCGCGGCCGTCTCCAG CACGATCTCCAGCGTGGCGGCGCTGCTGGCCGCCGCCTTCGTGGTCGCCGGCCTGATGGCGCTGTGGATCATCCGCAGCA CGACCCGGCCGCTGGCCGAGGCGGCGGCGATCGCGCGCGCCGTCGCCGGTGGCGACCTGGCGATGGAGTTCGCCGCCAAC GGCAAGAACGAGACCGGCCTGCTGCTGGCCGCGCTGCACGACATGAAGACCCGCCTCGCGGCGATCGTGAGCGAGGTGCG CCGCAACGCCGAAGGCGTGGCCACCGCCTCGGCGCAGATCGCCCAGGGCAACAACGACCTCTCCAGCCGCACCGAGGAAC AGGCCAGCGCGCTGGAAGAGACCGCGGCCTCGATGGAGGAGCTGTCGAGCACCGTGAAGCAGAACGCCGACAACGCCCAG CAGGGCAACCAGCTCGCGCTGGGCGCGTCGACCGTGGCGGTCAAGGGCGGCGACGTGGTCGGCCAGGTGGTCGACACCAT GAAGGGCATCAACGACAGCTCGAAGAAGATCGCCGACATCATCGGCGTGATCGACAGCATCGCGTTCCAGACCAACATCC TGGCGCTGAACGCCGCGGTGGAAGCGGCACGCGCCGGCGAGCAGGGCCGCGGTTTCGCGGTGGTGGCCAGCGAGGTGCGC AACCTGGCGCAGCGCAGCGCCGATGCCGCCAAGGAGATCAAGGGCCTGATCAACGCCAGCGTGCAGCGCGTGGAACAAGG CAGCGCGCTGGTCGACCAGGCCGGCGTGACGATGAGCGAGGTGGTCTCGTCGATCCGCCGCGTGACCGACATCATGGGCG AGATCAGCTCGGCCAGCCGGGAACAGAGCGCCGGCGTGGCGCAGGTGGGCGAGGCCGTCACGCAGATGGACCAGGCCACG CAGCAGAACGCCGCGCTGGTGGAAGAAAGCGCCGCCGCCGCCGAGAGCCTGAAGGCCCAGGCCCAGCAGCTGGTGCAGGC CGTGGCGGTGTTCAAGCTGGCGCACGACGCCGCCGCGTCGACCGCGGCGCAGGGCTCGTCGAGCCGCGCACCGCTCGCGC TGCCGGCTCCGACCCCGGCCAAGCCGCCCAAGGCCGCCGCGGCGCCGATGATCGAGCGGCGCAGCCCCAACCGCGCGACC AACGTGGTGCGCCCGGCCTTCCAGGCCAAGGCGCCCTCGTCCACGACCGCCGAGGCGGCAGCGGCCCGCAGCGGCACCGA CGACTGGGAATCGTTCTGA
Upstream 100 bases:
>100_bases GGCACCATCGCAGGGTCGTGGAACACAGGCGGGTTGCGCCCGTCCGGTCCACGAGCGCCTATCCGGCACCCCCTGCCATC GACATCATCGATCACACGAC
Downstream 100 bases:
>100_bases CGGTTCGCGCCACCCCGCACGAAGCGCCGCGACATCGCTGATCGCGGGCACCCGCCCGGCGTTACAGTCGGCGCTTCGTC CTGTTCCCGGGGGCTGAGCG
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MKLSDMKISTRLMLGFAAMAVLMSLLGALAIIKVTAIQGKFADVMDDRYPKIQTAGDIRTVNNEVSLAIRNLFVVSEPAD VQAQFDVIANSSKRTNANIDTLQRSITSAQGKAALDKLMAARADYRGPRDKVLELLRAGQMDEAKLVLVREVTPKQVAYM ARLDELIQLQENLMTASADEVSAAVSSTISSVAALLAAAFVVAGLMALWIIRSTTRPLAEAAAIARAVAGGDLAMEFAAN GKNETGLLLAALHDMKTRLAAIVSEVRRNAEGVATASAQIAQGNNDLSSRTEEQASALEETAASMEELSSTVKQNADNAQ QGNQLALGASTVAVKGGDVVGQVVDTMKGINDSSKKIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR NLAQRSADAAKEIKGLINASVQRVEQGSALVDQAGVTMSEVVSSIRRVTDIMGEISSASREQSAGVAQVGEAVTQMDQAT QQNAALVEESAAAAESLKAQAQQLVQAVAVFKLAHDAAASTAAQGSSSRAPLALPAPTPAKPPKAAAAPMIERRSPNRAT NVVRPAFQAKAPSSTTAEAAAARSGTDDWESF
Sequences:
>Translated_592_residues MKLSDMKISTRLMLGFAAMAVLMSLLGALAIIKVTAIQGKFADVMDDRYPKIQTAGDIRTVNNEVSLAIRNLFVVSEPAD VQAQFDVIANSSKRTNANIDTLQRSITSAQGKAALDKLMAARADYRGPRDKVLELLRAGQMDEAKLVLVREVTPKQVAYM ARLDELIQLQENLMTASADEVSAAVSSTISSVAALLAAAFVVAGLMALWIIRSTTRPLAEAAAIARAVAGGDLAMEFAAN GKNETGLLLAALHDMKTRLAAIVSEVRRNAEGVATASAQIAQGNNDLSSRTEEQASALEETAASMEELSSTVKQNADNAQ QGNQLALGASTVAVKGGDVVGQVVDTMKGINDSSKKIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR NLAQRSADAAKEIKGLINASVQRVEQGSALVDQAGVTMSEVVSSIRRVTDIMGEISSASREQSAGVAQVGEAVTQMDQAT QQNAALVEESAAAAESLKAQAQQLVQAVAVFKLAHDAAASTAAQGSSSRAPLALPAPTPAKPPKAAAAPMIERRSPNRAT NVVRPAFQAKAPSSTTAEAAAARSGTDDWESF >Mature_592_residues MKLSDMKISTRLMLGFAAMAVLMSLLGALAIIKVTAIQGKFADVMDDRYPKIQTAGDIRTVNNEVSLAIRNLFVVSEPAD VQAQFDVIANSSKRTNANIDTLQRSITSAQGKAALDKLMAARADYRGPRDKVLELLRAGQMDEAKLVLVREVTPKQVAYM ARLDELIQLQENLMTASADEVSAAVSSTISSVAALLAAAFVVAGLMALWIIRSTTRPLAEAAAIARAVAGGDLAMEFAAN GKNETGLLLAALHDMKTRLAAIVSEVRRNAEGVATASAQIAQGNNDLSSRTEEQASALEETAASMEELSSTVKQNADNAQ QGNQLALGASTVAVKGGDVVGQVVDTMKGINDSSKKIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR NLAQRSADAAKEIKGLINASVQRVEQGSALVDQAGVTMSEVVSSIRRVTDIMGEISSASREQSAGVAQVGEAVTQMDQAT QQNAALVEESAAAAESLKAQAQQLVQAVAVFKLAHDAAASTAAQGSSSRAPLALPAPTPAKPPKAAAAPMIERRSPNRAT NVVRPAFQAKAPSSTTAEAAAARSGTDDWESF
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=358, Percent_Identity=56.145251396648, Blast_Score=327, Evalue=1e-90, Organism=Escherichia coli, GI1788194, Length=335, Percent_Identity=55.5223880597015, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI2367378, Length=430, Percent_Identity=50.6976744186047, Blast_Score=323, Evalue=2e-89, Organism=Escherichia coli, GI1787690, Length=336, Percent_Identity=54.4642857142857, Blast_Score=312, Evalue=5e-86, Organism=Escherichia coli, GI1789453, Length=328, Percent_Identity=39.3292682926829, Blast_Score=214, Evalue=1e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR003122 - InterPro: IPR004091 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 61674; Mature: 61674
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDMKISTRLMLGFAAMAVLMSLLGALAIIKVTAIQGKFADVMDDRYPKIQTAGDIRT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEE VNNEVSLAIRNLFVVSEPADVQAQFDVIANSSKRTNANIDTLQRSITSAQGKAALDKLMA CCHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARADYRGPRDKVLELLRAGQMDEAKLVLVREVTPKQVAYMARLDELIQLQENLMTASADE HHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHH VSAAVSSTISSVAALLAAAFVVAGLMALWIIRSTTRPLAEAAAIARAVAGGDLAMEFAAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCC GKNETGLLLAALHDMKTRLAAIVSEVRRNAEGVATASAQIAQGNNDLSSRTEEQASALEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH TAASMEELSSTVKQNADNAQQGNQLALGASTVAVKGGDVVGQVVDTMKGINDSSKKIADI HHHHHHHHHHHHHHCCCCHHCCCEEEECCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHH IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSADAAKEIKGLINAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQRVEQGSALVDQAGVTMSEVVSSIRRVTDIMGEISSASREQSAGVAQVGEAVTQMDQAT HHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QQNAALVEESAAAAESLKAQAQQLVQAVAVFKLAHDAAASTAAQGSSSRAPLALPAPTPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC KPPKAAAAPMIERRSPNRATNVVRPAFQAKAPSSTTAEAAAARSGTDDWESF CCCCHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHCCC >Mature Secondary Structure MKLSDMKISTRLMLGFAAMAVLMSLLGALAIIKVTAIQGKFADVMDDRYPKIQTAGDIRT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEE VNNEVSLAIRNLFVVSEPADVQAQFDVIANSSKRTNANIDTLQRSITSAQGKAALDKLMA CCHHHHHHHHHHEEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARADYRGPRDKVLELLRAGQMDEAKLVLVREVTPKQVAYMARLDELIQLQENLMTASADE HHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHH VSAAVSSTISSVAALLAAAFVVAGLMALWIIRSTTRPLAEAAAIARAVAGGDLAMEFAAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCC GKNETGLLLAALHDMKTRLAAIVSEVRRNAEGVATASAQIAQGNNDLSSRTEEQASALEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH TAASMEELSSTVKQNADNAQQGNQLALGASTVAVKGGDVVGQVVDTMKGINDSSKKIADI HHHHHHHHHHHHHHCCCCHHCCCEEEECCCEEEECCCHHHHHHHHHHHCCCCHHHHHHHH IGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSADAAKEIKGLINAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQRVEQGSALVDQAGVTMSEVVSSIRRVTDIMGEISSASREQSAGVAQVGEAVTQMDQAT HHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QQNAALVEESAAAAESLKAQAQQLVQAVAVFKLAHDAAASTAAQGSSSRAPLALPAPTPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC KPPKAAAAPMIERRSPNRATNVVRPAFQAKAPSSTTAEAAAARSGTDDWESF CCCCHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2496104 [H]