| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265911
Identifier: 124265911
GI number: 124265911
Start: 744750
End: 745517
Strand: Direct
Name: 124265911
Synonym: Mpe_A0718
Alternate gene names: NA
Gene position: 744750-745517 (Clockwise)
Preceding gene: 124265910
Following gene: 124265912
Centisome position: 18.42
GC content: 72.27
Gene sequence:
>768_bases TTGTTCACCCGATACCTCGCCGTCTGGCTGCTGGTCCTGACCGGTCTGACGGGCCTGGCGCCCGTCGCAGCGGCGCAGCC TGCACAGGCGGCCGCTGTGTCCGGCCCGACCGCCTACCCCTCCGAAGCCTCGCAGTGGCCGGGCAAGGGCGTCGTGCGCG TCTTCGGCTGGATGGTCGACAACCGCCGCGAGTTCTGGCGGCAGCGCGAGCACGAGCGGGGCCGGGTGGTGTTCGCCGGC GATTCGCTGGTCGCCGGCTGGCGCACGCTGAAGCAGGACTTCCCCTCCGTGCCGGTGGCCAACCGGGGCATCGGCGGCGA CGTCAGCCGCGGCCTGCTGTTCCGCTTCCAGGAGGACGTGCTCGATCTTCAACCGACGGCCGTGGTGATCCAGATCGGCA CCAACGACCTCAGCGCCCAGCAGGCCCCGGCCGACACCGTGTCCAACCTCGTCGCGATGATCGAGATGGCGCGCCGGCAC GACCGCGGGCTGCCGATCATCGTCTGCACCGTGCCGCCGCGTGCCCACCCGCAGGCGCCGATCGATCCGGCGAAGTGGAG GGAGCTCAACGCCGGCATCCGGGCGCTCGCGGATCGGCAGGCGGGCGTCAGTGTGGTCGAACTGGCCGAGCCGCTGTCGG CACCCGACGGATCGCTCGACCCGCGCTACTTCGCGACCGACAGGCTGCACCTGTCGGCGCAGGGCTACGAGCGCTGGACA TCGGCACTCGAGCCCGCCCTGGCGCCGCTGCGCACGAGCCGCCGCTGA
Upstream 100 bases:
>100_bases CTGTCAGGACGTCGCTCCTGGTTACGCCTCTGCCCTGTTGTTGCAGGGAAATGCACGCATCGCCGTTCAAACTCCTGCGA CCGCCAACGCAGGAGACGCC
Downstream 100 bases:
>100_bases TGCGCCTCGCCTCCGACGCCCGGTCATGAACGCGCGAGCGCCGTCCTCCCCGGTCGCCGCACCGCCCATCGGTGCGGCCG CCACGGCCTATCTCGACGCG
Product: putative platelet-activating factor acetylhydrolase IB subunit gamma
Products: NA
Alternate protein names: GDSL Family Lipase; Acylhydrolase; Lipase/Phospolipase; GDSL-Like Lipase/Acylhydrolase Domain Protein; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit; Lipolytic Protein; Acyl-CoA Thioesterase; Gdsl-Family Lipolytic Protein; Lipase/Acylhydrolase; Mucin-Desulfating Sulfatase; Lipase/Acylhydrolase GDSL Family; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; SGNH-Hydrolase; Esterase/Lipase-Like Protein; Lipolytic G-D-S-L; G-D-S-L Family Lipolytic Protein; Secreted Protein; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MFTRYLAVWLLVLTGLTGLAPVAAAQPAQAAAVSGPTAYPSEASQWPGKGVVRVFGWMVDNRREFWRQREHERGRVVFAG DSLVAGWRTLKQDFPSVPVANRGIGGDVSRGLLFRFQEDVLDLQPTAVVIQIGTNDLSAQQAPADTVSNLVAMIEMARRH DRGLPIIVCTVPPRAHPQAPIDPAKWRELNAGIRALADRQAGVSVVELAEPLSAPDGSLDPRYFATDRLHLSAQGYERWT SALEPALAPLRTSRR
Sequences:
>Translated_255_residues MFTRYLAVWLLVLTGLTGLAPVAAAQPAQAAAVSGPTAYPSEASQWPGKGVVRVFGWMVDNRREFWRQREHERGRVVFAG DSLVAGWRTLKQDFPSVPVANRGIGGDVSRGLLFRFQEDVLDLQPTAVVIQIGTNDLSAQQAPADTVSNLVAMIEMARRH DRGLPIIVCTVPPRAHPQAPIDPAKWRELNAGIRALADRQAGVSVVELAEPLSAPDGSLDPRYFATDRLHLSAQGYERWT SALEPALAPLRTSRR >Mature_255_residues MFTRYLAVWLLVLTGLTGLAPVAAAQPAQAAAVSGPTAYPSEASQWPGKGVVRVFGWMVDNRREFWRQREHERGRVVFAG DSLVAGWRTLKQDFPSVPVANRGIGGDVSRGLLFRFQEDVLDLQPTAVVIQIGTNDLSAQQAPADTVSNLVAMIEMARRH DRGLPIIVCTVPPRAHPQAPIDPAKWRELNAGIRALADRQAGVSVVELAEPLSAPDGSLDPRYFATDRLHLSAQGYERWT SALEPALAPLRTSRR
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27874; Mature: 27874
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRYLAVWLLVLTGLTGLAPVAAAQPAQAAAVSGPTAYPSEASQWPGKGVVRVFGWMVD CHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH NRREFWRQREHERGRVVFAGDSLVAGWRTLKQDFPSVPVANRGIGGDVSRGLLFRFQEDV HHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH LDLQPTAVVIQIGTNDLSAQQAPADTVSNLVAMIEMARRHDRGLPIIVCTVPPRAHPQAP HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC IDPAKWRELNAGIRALADRQAGVSVVELAEPLSAPDGSLDPRYFATDRLHLSAQGYERWT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCEEEEECCHHHHHH SALEPALAPLRTSRR HHHHHHHHHHHCCCC >Mature Secondary Structure MFTRYLAVWLLVLTGLTGLAPVAAAQPAQAAAVSGPTAYPSEASQWPGKGVVRVFGWMVD CHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH NRREFWRQREHERGRVVFAGDSLVAGWRTLKQDFPSVPVANRGIGGDVSRGLLFRFQEDV HHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH LDLQPTAVVIQIGTNDLSAQQAPADTVSNLVAMIEMARRHDRGLPIIVCTVPPRAHPQAP HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC IDPAKWRELNAGIRALADRQAGVSVVELAEPLSAPDGSLDPRYFATDRLHLSAQGYERWT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCEEEEECCHHHHHH SALEPALAPLRTSRR HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA