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The map label for this gene is secB [H]

Identifier: 124265909

GI number: 124265909

Start: 743069

End: 743569

Strand: Direct

Name: secB [H]

Synonym: Mpe_A0716

Alternate gene names: 124265909

Gene position: 743069-743569 (Clockwise)

Preceding gene: 124265908

Following gene: 124265910

Centisome position: 18.37

GC content: 67.07

Gene sequence:

>501_bases
ATGCCCACCATGGCCGAGCAAGACTCCAACCCCGTGTTCCAGATCCAGCGCGTCTACCTCAAGGACGTGTCGCTGGAGCA
GCCCAATTCGCCGCAGATCCTGCTCGAGCAGTCGCAGCCGCAGGTCGACATCAGCCTGGCCGTCAACGCCGAGACCGTGG
CCGACGGCATCTACGAGGTGTCGGTGACCGCCACGGTCACCACCAAGGTCGCCGACAAGACGCTGTTCCTGTGCGAAGCC
AAGCAGGCCGGCATCTTCGAGATCCGCAACCTGCCCGACGGCCAGACGCAGCCGGTGCTGGGCATCGCCTGCCCCGGCAT
CGTCTACCCCTACCTGCGCGCGACGGTGGCCGACATCATCACCCGTGCCGGCTTCCCGCCGGTGCACCTGGCCGAGGTGA
ACTTCCAGGCCATGTACGAAGCCCAGCAGCAGGCCGCCGCGCAGCAGCAAGGCGCGGTGAGCAACGGCAACGGCGGCTCG
CCGATCATCACCAACGCCTGA

Upstream 100 bases:

>100_bases
CGCCGACGTCGACGACGGCGGGCCGTTTGTTTGTTCAAGGCCCTCCAGACCGCGATGCCTCCCACGGCCCCGCGGTTCGA
GCCGGCCCAGCCCCTGACGG

Downstream 100 bases:

>100_bases
TCCGCGCCGCCAGCCCGGCCCGCCGCGCATGCGCATCACGGTCCTCGGCGCCGGTGCCTGGGGCACGGCCCTCTCCGTCG
GCATCGCGCCGCGGCACGAC

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPTMAEQDSNPVFQIQRVYLKDVSLEQPNSPQILLEQSQPQVDISLAVNAETVADGIYEVSVTATVTTKVADKTLFLCEA
KQAGIFEIRNLPDGQTQPVLGIACPGIVYPYLRATVADIITRAGFPPVHLAEVNFQAMYEAQQQAAAQQQGAVSNGNGGS
PIITNA

Sequences:

>Translated_166_residues
MPTMAEQDSNPVFQIQRVYLKDVSLEQPNSPQILLEQSQPQVDISLAVNAETVADGIYEVSVTATVTTKVADKTLFLCEA
KQAGIFEIRNLPDGQTQPVLGIACPGIVYPYLRATVADIITRAGFPPVHLAEVNFQAMYEAQQQAAAQQQGAVSNGNGGS
PIITNA
>Mature_165_residues
PTMAEQDSNPVFQIQRVYLKDVSLEQPNSPQILLEQSQPQVDISLAVNAETVADGIYEVSVTATVTTKVADKTLFLCEAK
QAGIFEIRNLPDGQTQPVLGIACPGIVYPYLRATVADIITRAGFPPVHLAEVNFQAMYEAQQQAAAQQQGAVSNGNGGSP
IITNA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=146, Percent_Identity=41.0958904109589, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17786; Mature: 17655

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMAEQDSNPVFQIQRVYLKDVSLEQPNSPQILLEQSQPQVDISLAVNAETVADGIYEV
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHCCEEEE
SVTATVTTKVADKTLFLCEAKQAGIFEIRNLPDGQTQPVLGIACPGIVYPYLRATVADII
EEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
TRAGFPPVHLAEVNFQAMYEAQQQAAAQQQGAVSNGNGGSPIITNA
HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure 
PTMAEQDSNPVFQIQRVYLKDVSLEQPNSPQILLEQSQPQVDISLAVNAETVADGIYEV
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEECCHHHHCCEEEE
SVTATVTTKVADKTLFLCEAKQAGIFEIRNLPDGQTQPVLGIACPGIVYPYLRATVADII
EEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
TRAGFPPVHLAEVNFQAMYEAQQQAAAQQQGAVSNGNGGSPIITNA
HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA