| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is gpmA
Identifier: 124265906
GI number: 124265906
Start: 741241
End: 741984
Strand: Reverse
Name: gpmA
Synonym: Mpe_A0713
Alternate gene names: 124265906
Gene position: 741984-741241 (Counterclockwise)
Preceding gene: 124265920
Following gene: 124265897
Centisome position: 18.35
GC content: 69.35
Gene sequence:
>744_bases ATGACCCAACTCGTGCTGATCCGCCACGGCGAATCGACCTGGAACCTCGAGAACCGCTTCACCGGCTGGACCGATGTGGA ACTCACTCCCACCGGCGTGGCCCAGGCCCAGCAGGCCGGCCGGCTGCTGAAGCAGGCCGGCATCGATTTCGACACCGTCT ACACCTCGGTGCTCAAGCGCGCGATCTGGACCGCCTGGCACTGCCTCGACGGCATGGACCGCACCTGGCTGCCGGTCATC AAGGACTGGCGCCTCAACGAGCGCCACTACGGCGGCCTGCAGGGCCTGAACAAGGCCGACATGGCCAAGCAGTTCGGCGA CGAGCAGGTGCTGCTCTGGCGCCGCAGCTACGACGTGCCGCCGCCGCCGCTGGAAGCGAACGACCCGCGCAGCGAGCGCA GCGACGTGCGCTACGCGAAGCTCGCGGCCAACCAGGTGCCGCTGACCGAGTGCCTGAAGGACACCGTGGCGCGCGTGCTG CCGCTCTGGTACGGCACGCTGGCCCCGGCCATCGCCGCCGGCCAGCGGCTGGTGATCGTGGCGCACGGCAACAGCATCCG CGCGCTGGTGAAGCACCTGAACAACATCTCCGACGCCGACATCGTGGGCGTGAACATCCCGAACGGCATCCCGCTGGTCT ACGACCTGGACGCCAACCTGAAGCCCACGTCGAAGTACTACCTGGGCGGGGCCGACGCCGCCGCGCAGGCGGCCTCGGTG TCCGCGCTGCAGGCGGACGGCTGA
Upstream 100 bases:
>100_bases ACTTCACGGTGGGGGCGCGCGCGGCCAGCGCGGTCAGGGAGGCGGAAAGACAGCGATTCTAGAATCTGCGGCTATTCCCA TTGCTGCCGCGACCCGCCTC
Downstream 100 bases:
>100_bases GGCCGTGCCTCAGCCCACCAGGCCGTAGAGCCGCTCCGGCGCCACGCGCAGCACGAGCTGCAGGTCGGTCGCCCGGCCGG CGATCTGGCAGCCCGGCTGG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTQLVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKRAIWTAWHCLDGMDRTWLPVI KDWRLNERHYGGLQGLNKADMAKQFGDEQVLLWRRSYDVPPPPLEANDPRSERSDVRYAKLAANQVPLTECLKDTVARVL PLWYGTLAPAIAAGQRLVIVAHGNSIRALVKHLNNISDADIVGVNIPNGIPLVYDLDANLKPTSKYYLGGADAAAQAASV SALQADG
Sequences:
>Translated_247_residues MTQLVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKRAIWTAWHCLDGMDRTWLPVI KDWRLNERHYGGLQGLNKADMAKQFGDEQVLLWRRSYDVPPPPLEANDPRSERSDVRYAKLAANQVPLTECLKDTVARVL PLWYGTLAPAIAAGQRLVIVAHGNSIRALVKHLNNISDADIVGVNIPNGIPLVYDLDANLKPTSKYYLGGADAAAQAASV SALQADG >Mature_246_residues TQLVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKRAIWTAWHCLDGMDRTWLPVIK DWRLNERHYGGLQGLNKADMAKQFGDEQVLLWRRSYDVPPPPLEANDPRSERSDVRYAKLAANQVPLTECLKDTVARVLP LWYGTLAPAIAAGQRLVIVAHGNSIRALVKHLNNISDADIVGVNIPNGIPLVYDLDANLKPTSKYYLGGADAAAQAASVS ALQADG
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=246, Percent_Identity=51.6260162601626, Blast_Score=276, Evalue=1e-74, Organism=Homo sapiens, GI4505753, Length=246, Percent_Identity=52.8455284552846, Blast_Score=257, Evalue=8e-69, Organism=Homo sapiens, GI71274132, Length=245, Percent_Identity=51.0204081632653, Blast_Score=244, Evalue=4e-65, Organism=Homo sapiens, GI4502445, Length=240, Percent_Identity=46.25, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI40353764, Length=240, Percent_Identity=46.25, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=58.3850931677019, Blast_Score=182, Evalue=2e-46, Organism=Escherichia coli, GI1786970, Length=232, Percent_Identity=57.7586206896552, Blast_Score=296, Evalue=8e-82, Organism=Saccharomyces cerevisiae, GI6322697, Length=229, Percent_Identity=52.4017467248908, Blast_Score=250, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324516, Length=288, Percent_Identity=34.375, Blast_Score=141, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320183, Length=291, Percent_Identity=31.2714776632302, Blast_Score=135, Evalue=7e-33, Organism=Drosophila melanogaster, GI24646216, Length=246, Percent_Identity=47.1544715447154, Blast_Score=234, Evalue=5e-62, Organism=Drosophila melanogaster, GI85725270, Length=247, Percent_Identity=45.748987854251, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI85725272, Length=247, Percent_Identity=45.748987854251, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI24650981, Length=247, Percent_Identity=45.748987854251, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI28571815, Length=218, Percent_Identity=40.8256880733945, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI28571817, Length=218, Percent_Identity=40.8256880733945, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24648979, Length=218, Percent_Identity=40.8256880733945, Blast_Score=169, Evalue=2e-42,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_METPP (A2SDN6)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019910.1 - ProteinModelPortal: A2SDN6 - SMR: A2SDN6 - STRING: A2SDN6 - GeneID: 4783898 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0713 - NMPDR: fig|279263.3.peg.3272 - eggNOG: COG0588 - HOGENOM: HBG658938 - OMA: TGWKDPD - PhylomeDB: A2SDN6 - BioCyc: MPET420662:MPE_A0713-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 27223; Mature: 27092
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKR CCEEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AIWTAWHCLDGMDRTWLPVIKDWRLNERHYGGLQGLNKADMAKQFGDEQVLLWRRSYDVP HHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCC PPPLEANDPRSERSDVRYAKLAANQVPLTECLKDTVARVLPLWYGTLAPAIAAGQRLVIV CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE AHGNSIRALVKHLNNISDADIVGVNIPNGIPLVYDLDANLKPTSKYYLGGADAAAQAASV ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHH SALQADG HHHCCCC >Mature Secondary Structure TQLVLIRHGESTWNLENRFTGWTDVELTPTGVAQAQQAGRLLKQAGIDFDTVYTSVLKR CEEEEEECCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AIWTAWHCLDGMDRTWLPVIKDWRLNERHYGGLQGLNKADMAKQFGDEQVLLWRRSYDVP HHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCC PPPLEANDPRSERSDVRYAKLAANQVPLTECLKDTVARVLPLWYGTLAPAIAAGQRLVIV CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE AHGNSIRALVKHLNNISDADIVGVNIPNGIPLVYDLDANLKPTSKYYLGGADAAAQAASV ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHH SALQADG HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA