Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265884

Identifier: 124265884

GI number: 124265884

Start: 722493

End: 722969

Strand: Direct

Name: 124265884

Synonym: Mpe_A0691

Alternate gene names: NA

Gene position: 722493-722969 (Clockwise)

Preceding gene: 124265883

Following gene: 124265889

Centisome position: 17.86

GC content: 66.04

Gene sequence:

>477_bases
ATGCATGTCAAACCCTCCATCGCCGCCGCACTGTTGTGCAGTGCCCTGGCCACTGCCGCGTCGGCCCAGGTCGCCATCCA
GGACGCCTGGGTTCGCGCAACGGTACCGCAGCAGAAGGCCACGGGCGCCTTCATGCAGCTCACCGCGGCGCAGGACAGCC
GGTTGGTGTCGGTCCAATCGACCGTCGCGGCCCTGGTCGAACTGCACGAGATGACCATCCAGGACGGCGTGATGAAGATG
CGCGAGATCCCGGGACTGGCCCTGCCGGCAGGCAAGGCCGTCGACCTGAAGCCCGGCAGCTATCACGTCATGCTGATGAA
CCTCAAGCAGCAGATGAAGGCCGGTGACAGCGTGCCGCTCACGCTGGTGTTCGAGGACAAGACCGGCAAGCGCGACACCG
TAGAGGTCAAGGCCGAAGTGAGGGCGCTCGGGACCCAGCCGGCGAAGCAGGACGGGCACGGCGGTCACAAGCATTGA

Upstream 100 bases:

>100_bases
GATGCGCATGAACGCGCAGGGAACGCATTCGCATTGAAGCCGACGCCCACGCGCAAGCGTTGCGTGGGATCTTGAATCCA
ACCTACCGAAAGGATCTGCC

Downstream 100 bases:

>100_bases
GCCTGGGGCCGCGGTGCGCCTCGTCAGTCGGGGATCTGCGGCTCCACCAACTGGGCCAGCTGGGCGAGCGATTCCTGCCA
GCCCAGGTAGCACATCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MHVKPSIAAALLCSALATAASAQVAIQDAWVRATVPQQKATGAFMQLTAAQDSRLVSVQSTVAALVELHEMTIQDGVMKM
REIPGLALPAGKAVDLKPGSYHVMLMNLKQQMKAGDSVPLTLVFEDKTGKRDTVEVKAEVRALGTQPAKQDGHGGHKH

Sequences:

>Translated_158_residues
MHVKPSIAAALLCSALATAASAQVAIQDAWVRATVPQQKATGAFMQLTAAQDSRLVSVQSTVAALVELHEMTIQDGVMKM
REIPGLALPAGKAVDLKPGSYHVMLMNLKQQMKAGDSVPLTLVFEDKTGKRDTVEVKAEVRALGTQPAKQDGHGGHKH
>Mature_158_residues
MHVKPSIAAALLCSALATAASAQVAIQDAWVRATVPQQKATGAFMQLTAAQDSRLVSVQSTVAALVELHEMTIQDGVMKM
REIPGLALPAGKAVDLKPGSYHVMLMNLKQQMKAGDSVPLTLVFEDKTGKRDTVEVKAEVRALGTQPAKQDGHGGHKH

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007410 [H]

Pfam domain/function: PF04314 DUF461 [H]

EC number: NA

Molecular weight: Translated: 16761; Mature: 16761

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVKPSIAAALLCSALATAASAQVAIQDAWVRATVPQQKATGAFMQLTAAQDSRLVSVQS
CCCCHHHHHHHHHHHHHHHHHHHEEEEHHEEEECCCCCHHCCCEEEEECCCCCEEEHHHH
TVAALVELHEMTIQDGVMKMREIPGLALPAGKAVDLKPGSYHVMLMNLKQQMKAGDSVPL
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCEEEEEEEHHHHHCCCCCCCE
TLVFEDKTGKRDTVEVKAEVRALGTQPAKQDGHGGHKH
EEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHVKPSIAAALLCSALATAASAQVAIQDAWVRATVPQQKATGAFMQLTAAQDSRLVSVQS
CCCCHHHHHHHHHHHHHHHHHHHEEEEHHEEEECCCCCHHCCCEEEEECCCCCEEEHHHH
TVAALVELHEMTIQDGVMKMREIPGLALPAGKAVDLKPGSYHVMLMNLKQQMKAGDSVPL
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCEEEEEEEHHHHHCCCCCCCE
TLVFEDKTGKRDTVEVKAEVRALGTQPAKQDGHGGHKH
EEEECCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA