| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265813
Identifier: 124265813
GI number: 124265813
Start: 653850
End: 655172
Strand: Reverse
Name: 124265813
Synonym: Mpe_A0620
Alternate gene names: NA
Gene position: 655172-653850 (Counterclockwise)
Preceding gene: 124265814
Following gene: 124265812
Centisome position: 16.2
GC content: 70.9
Gene sequence:
>1323_bases ATGATCGGACCGGTCTCGCTTTCTCGCGCCGGCGCGCGGATCGCCGCGATGGCCGGGTTGCTGCTGCTGCCGGCGCTGGC CTCGCTGACACTGGCCGCCTCGCCGGCGGCACCGCCGGCCTGCGGCGTGGTGAAGTCCTTCGAGCGCTGCGACGACGGCC GGCAGCGCTGCGAACGGGTCGCCGCCTACGACGTGCCGGACTACTGGCACGGTCTCGCGCAGTGCCTGCGTGGCCTGCGC GACCGCTGGTCGCGCGACGGTCCGGACGCACCGGTCCCGGTCGGTGCCGCCGGCGATGCCGAGGTCGGCGTCGCGACCCT GGTGCGGCGCCAGGTGATGCTGGAAATGGCCACCGGACCGGTGCGCTTCGCCGCCCAGGGCCGCCCCGTTGCCGATCTGC GCCTCGACGACATCTTCGACGCCCGCGGCACGCCGCGGCGCGGCTTCGACCGCGCCGTGTTGCTGAACGATCGCGGCATG GCCTACAACGCGATGGGCCAGAGCGGGCTGGCCTATTTCCTGTATCAGATGGCCGCGCTCGCCGACCGCGGCGGCTACCC CCAGGCCGCCACCGACACGGCGTTCTATCGAGCCCTCGCTCACGGCGCGATTGCTACCGTGCTGACACCGGTCGCAGAAG GCGGCCTCGCCGCCTCGCGTCCCTGCGACGACGACGCGGCACGGCGCTGCACCTGGTACCACTCGATCACACGCCGCGAT CAGCCCACCGAGGCCGGTGCCACGCTGAATCAGCACCTTCATGCGGTCCGCGACCTCGGTCTCATCGCCGACCTGGTGCG CAAACAGCGCTGGAACGAGGGTATCGACTTCAACCGCGCGATCGCGGAGGGCCTCGACCAACTCGCCTTCTCGGCCGGCA GCACGAGGCCCGGTGCCATGCCGAACCTGCGCGATTTCCTTTCACCGCCAGCCGGCCAGGCGCGCGTGCGCTGGGCCTAT TACGGCTTGAATCCCACTGCGGCCGACGGACGGCGAGCCTATTTTTTGGGCTTCGGCGGCAAGGACTGCAACTACCACTT GCACGTGCTCGACCTGTTGTCGCAGATCCTGCAGCGGGCCAAGGCCCAGGGCTTCCTGGCCCGCTACGAGACACCTCTGC TGGCATGTGATTCCGCGCTCGTCGAGATGGAGCGCGCCGCGCGTCTGCGGTCCACCCACGCCACCGACCCCAGGCTGTGG TCGACGCCCACTGCCGGACGAGACTACGCTTGCCCGAGGCTCAGCGCCGGCGCGGCGCCGGACGACGACAATGACAGCTT CCTCGAGAAGCGGCTGGCGGCCTGCCCGACCCCGCAGCGCTGA
Upstream 100 bases:
>100_bases CGCGCGGCCTGACGCAGATCCTGTACCAGATCGCCATCGCGGCGAAGGTCGCACTCGACCTCTGAGGCGACGGCACGCGC CGAACCCGTCGGAGCCGAAC
Downstream 100 bases:
>100_bases CCGAGACCTCTCCCTTTCATCACCCTTGCCGGGCCCCCCCGCAGTCGGAGCACCCCCGTGAGCACCGCCGTCTCCACCCC ACCTACTCGCCTGCAATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MIGPVSLSRAGARIAAMAGLLLLPALASLTLAASPAAPPACGVVKSFERCDDGRQRCERVAAYDVPDYWHGLAQCLRGLR DRWSRDGPDAPVPVGAAGDAEVGVATLVRRQVMLEMATGPVRFAAQGRPVADLRLDDIFDARGTPRRGFDRAVLLNDRGM AYNAMGQSGLAYFLYQMAALADRGGYPQAATDTAFYRALAHGAIATVLTPVAEGGLAASRPCDDDAARRCTWYHSITRRD QPTEAGATLNQHLHAVRDLGLIADLVRKQRWNEGIDFNRAIAEGLDQLAFSAGSTRPGAMPNLRDFLSPPAGQARVRWAY YGLNPTAADGRRAYFLGFGGKDCNYHLHVLDLLSQILQRAKAQGFLARYETPLLACDSALVEMERAARLRSTHATDPRLW STPTAGRDYACPRLSAGAAPDDDNDSFLEKRLAACPTPQR
Sequences:
>Translated_440_residues MIGPVSLSRAGARIAAMAGLLLLPALASLTLAASPAAPPACGVVKSFERCDDGRQRCERVAAYDVPDYWHGLAQCLRGLR DRWSRDGPDAPVPVGAAGDAEVGVATLVRRQVMLEMATGPVRFAAQGRPVADLRLDDIFDARGTPRRGFDRAVLLNDRGM AYNAMGQSGLAYFLYQMAALADRGGYPQAATDTAFYRALAHGAIATVLTPVAEGGLAASRPCDDDAARRCTWYHSITRRD QPTEAGATLNQHLHAVRDLGLIADLVRKQRWNEGIDFNRAIAEGLDQLAFSAGSTRPGAMPNLRDFLSPPAGQARVRWAY YGLNPTAADGRRAYFLGFGGKDCNYHLHVLDLLSQILQRAKAQGFLARYETPLLACDSALVEMERAARLRSTHATDPRLW STPTAGRDYACPRLSAGAAPDDDNDSFLEKRLAACPTPQR >Mature_440_residues MIGPVSLSRAGARIAAMAGLLLLPALASLTLAASPAAPPACGVVKSFERCDDGRQRCERVAAYDVPDYWHGLAQCLRGLR DRWSRDGPDAPVPVGAAGDAEVGVATLVRRQVMLEMATGPVRFAAQGRPVADLRLDDIFDARGTPRRGFDRAVLLNDRGM AYNAMGQSGLAYFLYQMAALADRGGYPQAATDTAFYRALAHGAIATVLTPVAEGGLAASRPCDDDAARRCTWYHSITRRD QPTEAGATLNQHLHAVRDLGLIADLVRKQRWNEGIDFNRAIAEGLDQLAFSAGSTRPGAMPNLRDFLSPPAGQARVRWAY YGLNPTAADGRRAYFLGFGGKDCNYHLHVLDLLSQILQRAKAQGFLARYETPLLACDSALVEMERAARLRSTHATDPRLW STPTAGRDYACPRLSAGAAPDDDNDSFLEKRLAACPTPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47547; Mature: 47547
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGPVSLSRAGARIAAMAGLLLLPALASLTLAASPAAPPACGVVKSFERCDDGRQRCERV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AAYDVPDYWHGLAQCLRGLRDRWSRDGPDAPVPVGAAGDAEVGVATLVRRQVMLEMATGP HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC VRFAAQGRPVADLRLDDIFDARGTPRRGFDRAVLLNDRGMAYNAMGQSGLAYFLYQMAAL EEEECCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHH ADRGGYPQAATDTAFYRALAHGAIATVLTPVAEGGLAASRPCDDDAARRCTWYHSITRRD HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC QPTEAGATLNQHLHAVRDLGLIADLVRKQRWNEGIDFNRAIAEGLDQLAFSAGSTRPGAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PNLRDFLSPPAGQARVRWAYYGLNPTAADGRRAYFLGFGGKDCNYHLHVLDLLSQILQRA CCHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHH KAQGFLARYETPLLACDSALVEMERAARLRSTHATDPRLWSTPTAGRDYACPRLSAGAAP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDDNDSFLEKRLAACPTPQR CCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MIGPVSLSRAGARIAAMAGLLLLPALASLTLAASPAAPPACGVVKSFERCDDGRQRCERV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AAYDVPDYWHGLAQCLRGLRDRWSRDGPDAPVPVGAAGDAEVGVATLVRRQVMLEMATGP HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC VRFAAQGRPVADLRLDDIFDARGTPRRGFDRAVLLNDRGMAYNAMGQSGLAYFLYQMAAL EEEECCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHH ADRGGYPQAATDTAFYRALAHGAIATVLTPVAEGGLAASRPCDDDAARRCTWYHSITRRD HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC QPTEAGATLNQHLHAVRDLGLIADLVRKQRWNEGIDFNRAIAEGLDQLAFSAGSTRPGAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PNLRDFLSPPAGQARVRWAYYGLNPTAADGRRAYFLGFGGKDCNYHLHVLDLLSQILQRA CCHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHH KAQGFLARYETPLLACDSALVEMERAARLRSTHATDPRLWSTPTAGRDYACPRLSAGAAP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDDNDSFLEKRLAACPTPQR CCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA