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The map label for this gene is yibD [H]

Identifier: 124265807

GI number: 124265807

Start: 647959

End: 649548

Strand: Direct

Name: yibD [H]

Synonym: Mpe_A0614

Alternate gene names: 124265807

Gene position: 647959-649548 (Clockwise)

Preceding gene: 124265803

Following gene: 124265808

Centisome position: 16.02

GC content: 68.36

Gene sequence:

>1590_bases
ATGAACATCGAACACGACGTCCGGCCTGTCCCGGCTCCCGTGGTGCTGACGATCGGCATTCCGGCCTACAACGCGGCGGC
CTCGATCGAGGCCGCGGTCCTTTCGATCCTGCGGCAGACCTGGCGCGGTTCGATGGAGATCCTGATCGTCGACGATGGCA
GCACTGACCGGACGGTCCAGATCGCCAACCGCCTGGCACAGCAGTACGGTGCAGTCCGGGTCGTGCAACACGGCGAGAAC
CTGGGTCGGCCCGCGGCACGCAACACCATCCTGCGCGAGAGCCGGGGCGAGTACATGACCTGGGCGGATGCCGATGACGA
GTGGTACCCGAACAAGCTGGCGGTGCAGTTCGACGAACTGCTGGCCAGCGCCGAGGCTCAGGCGGGCGAGCCGGTCATCT
GCATGAGTTCGTTCGACTGGCGCTGGTCGCACTCGGGCAAGCTGCAGCACCGCGTGCCCGACGTCACCAGCGATCCGTTG
AAGGCTTTTCTGAGCGGCCGCGTCGGCGCCTACCTCTGGACCATGCTGGCGCGCACCCAGACCTTCCGCGACGTGGGCGA
GTTCGACGCTCAGTTGCCTCGACTGCAGGACCTCGACTTCCTGATCCGCTTCGCGGCCCGGGGCGGGAGATTGATCGTCA
GCAACCCGGCCCGGCCGCTGTGCGTGTATCACAAGAACGACGACGACAAGCCCGGGCGCGTGATCGCGCAGTCGATGTCG
CACATCTGGCGCAAGCACTATCCGCTGTACCGGCAGTACGGCCGCGGCTTCTGCCGTGGCGCGCGGCGCAGGCACTTGTT
GCTGGCTTCGCGCCACGCCTTCAGCAACGAAGGCCGCCTGCTTGAACGACGACGACAAGCCCGGGCGCGTGATCGCGCAG
TCGATGTCGCACATCTGGCGCAAGCACTATCCGCTGTACCGGCAGTACGGCCGCGGCTTCTGCCGTGGCGCGCGGCGCAG
GCACTTGTTGCTGGCTTCGCGCCACGCCTTCAGCAACGAAGGCCGCCTGCTTGGTACGGCCTACTACCTGCGCGCCGCGC
TGGCCAGCCCGGGCTGGCTGCTAGGTCCTCTCAAGGCCAGGCTGCGAGGCGCCCCCCCAAGCCCACCGTCGAAGGTGCCG
CGGACGGACCGGCTCGAGGCCGAAGGCTTCGAGCCCATCGTGCGGTCTGCGGCCGCCATCGTGTCCGTCGACGTGGTGAT
GTCGCTGTCGGCCCAGCACGATGCCGCCCTGGGTCGTCATTTCGGCGACTGGAGCGACATCACGCGCAGCCGCGGCATGC
TTTATGTGCCTCGGACGATCGGCCTGCCCAAGGGAGCCGCCGACCACGCAGCCCTGCTCGACCTGCTGGACGCCGGCGAC
GATGCTTCAAAGCGGGCTGCGCGGCGTTTGCTCGAAGCCGCGGTGCTGTCCAGCACCGATGGCGCGAGTTCGGTGCTCTA
CCTTGGCGCGCCGGTCGAACTGGACCGCCATTCGGTGGCCACGGTGCGTTCGGGCGTGGAGCGCTGCGTGCGTCTGCTCG
GTCGCCTGGCCGCGACGCTGGCTGCTCAGCCGCGGCCCGTGCGCGTGAGGCTGCATCTGCTGGTGCCTGA

Upstream 100 bases:

>100_bases
GGCGGGCGCTGATCGAACGCCTCCCGGCAGGCGGCGCGGAGCGGCCCGGTAGTATGCCGTTCGACTCCCAGACGATTGCC
ACGAAGGCCACACGCCCCCG

Downstream 100 bases:

>100_bases
CACCGAGACGCTGCTGTGGCGTCGCTATTTGATGGCGATCGAGAACGGCCGCGAGGCCAACCTCGAGCGCTGGGTGCAGG
CCCTGAGCCCATCCGACGCA

Product: cell wall biogenesis glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MNIEHDVRPVPAPVVLTIGIPAYNAAASIEAAVLSILRQTWRGSMEILIVDDGSTDRTVQIANRLAQQYGAVRVVQHGEN
LGRPAARNTILRESRGEYMTWADADDEWYPNKLAVQFDELLASAEAQAGEPVICMSSFDWRWSHSGKLQHRVPDVTSDPL
KAFLSGRVGAYLWTMLARTQTFRDVGEFDAQLPRLQDLDFLIRFAARGGRLIVSNPARPLCVYHKNDDDKPGRVIAQSMS
HIWRKHYPLYRQYGRGFCRGARRRHLLLASRHAFSNEGRLLERRRQARARDRAVDVAHLAQALSAVPAVRPRLLPWRAAQ
ALVAGFAPRLQQRRPPAWYGLLPARRAGQPGLAARSSQGQAARRPPKPTVEGAADGPARGRRLRAHRAVCGRHRVRRRGD
VAVGPARCRPGSSFRRLERHHAQPRHALCASDDRPAQGSRRPRSPARPAGRRRRCFKAGCAAFARSRGAVQHRWREFGAL
PWRAGRTGPPFGGHGAFGRGALRASARSPGRDAGCSAAARAREAASAGA

Sequences:

>Translated_529_residues
MNIEHDVRPVPAPVVLTIGIPAYNAAASIEAAVLSILRQTWRGSMEILIVDDGSTDRTVQIANRLAQQYGAVRVVQHGEN
LGRPAARNTILRESRGEYMTWADADDEWYPNKLAVQFDELLASAEAQAGEPVICMSSFDWRWSHSGKLQHRVPDVTSDPL
KAFLSGRVGAYLWTMLARTQTFRDVGEFDAQLPRLQDLDFLIRFAARGGRLIVSNPARPLCVYHKNDDDKPGRVIAQSMS
HIWRKHYPLYRQYGRGFCRGARRRHLLLASRHAFSNEGRLLERRRQARARDRAVDVAHLAQALSAVPAVRPRLLPWRAAQ
ALVAGFAPRLQQRRPPAWYGLLPARRAGQPGLAARSSQGQAARRPPKPTVEGAADGPARGRRLRAHRAVCGRHRVRRRGD
VAVGPARCRPGSSFRRLERHHAQPRHALCASDDRPAQGSRRPRSPARPAGRRRRCFKAGCAAFARSRGAVQHRWREFGAL
PWRAGRTGPPFGGHGAFGRGALRASARSPGRDAGCSAAARAREAASAGA
>Mature_529_residues
MNIEHDVRPVPAPVVLTIGIPAYNAAASIEAAVLSILRQTWRGSMEILIVDDGSTDRTVQIANRLAQQYGAVRVVQHGEN
LGRPAARNTILRESRGEYMTWADADDEWYPNKLAVQFDELLASAEAQAGEPVICMSSFDWRWSHSGKLQHRVPDVTSDPL
KAFLSGRVGAYLWTMLARTQTFRDVGEFDAQLPRLQDLDFLIRFAARGGRLIVSNPARPLCVYHKNDDDKPGRVIAQSMS
HIWRKHYPLYRQYGRGFCRGARRRHLLLASRHAFSNEGRLLERRRQARARDRAVDVAHLAQALSAVPAVRPRLLPWRAAQ
ALVAGFAPRLQQRRPPAWYGLLPARRAGQPGLAARSSQGQAARRPPKPTVEGAADGPARGRRLRAHRAVCGRHRVRRRGD
VAVGPARCRPGSSFRRLERHHAQPRHALCASDDRPAQGSRRPRSPARPAGRRRRCFKAGCAAFARSRGAVQHRWREFGAL
PWRAGRTGPPFGGHGAFGRGALRASARSPGRDAGCSAAARAREAASAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=138, Percent_Identity=34.0579710144928, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 58560; Mature: 58560

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEHDVRPVPAPVVLTIGIPAYNAAASIEAAVLSILRQTWRGSMEILIVDDGSTDRTVQ
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
IANRLAQQYGAVRVVQHGENLGRPAARNTILRESRGEYMTWADADDEWYPNKLAVQFDEL
HHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
LASAEAQAGEPVICMSSFDWRWSHSGKLQHRVPDVTSDPLKAFLSGRVGAYLWTMLARTQ
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
TFRDVGEFDAQLPRLQDLDFLIRFAARGGRLIVSNPARPLCVYHKNDDDKPGRVIAQSMS
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHH
HIWRKHYPLYRQYGRGFCRGARRRHLLLASRHAFSNEGRLLERRRQARARDRAVDVAHLA
HHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QALSAVPAVRPRLLPWRAAQALVAGFAPRLQQRRPPAWYGLLPARRAGQPGLAARSSQGQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCC
AARRPPKPTVEGAADGPARGRRLRAHRAVCGRHRVRRRGDVAVGPARCRPGSSFRRLERH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
HAQPRHALCASDDRPAQGSRRPRSPARPAGRRRRCFKAGCAAFARSRGAVQHRWREFGAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PWRAGRTGPPFGGHGAFGRGALRASARSPGRDAGCSAAARAREAASAGA
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIEHDVRPVPAPVVLTIGIPAYNAAASIEAAVLSILRQTWRGSMEILIVDDGSTDRTVQ
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
IANRLAQQYGAVRVVQHGENLGRPAARNTILRESRGEYMTWADADDEWYPNKLAVQFDEL
HHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
LASAEAQAGEPVICMSSFDWRWSHSGKLQHRVPDVTSDPLKAFLSGRVGAYLWTMLARTQ
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
TFRDVGEFDAQLPRLQDLDFLIRFAARGGRLIVSNPARPLCVYHKNDDDKPGRVIAQSMS
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHH
HIWRKHYPLYRQYGRGFCRGARRRHLLLASRHAFSNEGRLLERRRQARARDRAVDVAHLA
HHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QALSAVPAVRPRLLPWRAAQALVAGFAPRLQQRRPPAWYGLLPARRAGQPGLAARSSQGQ
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCC
AARRPPKPTVEGAADGPARGRRLRAHRAVCGRHRVRRRGDVAVGPARCRPGSSFRRLERH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
HAQPRHALCASDDRPAQGSRRPRSPARPAGRRRRCFKAGCAAFARSRGAVQHRWREFGAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PWRAGRTGPPFGGHGAFGRGALRASARSPGRDAGCSAAARAREAASAGA
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]