| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265803
Identifier: 124265803
GI number: 124265803
Start: 642664
End: 643941
Strand: Direct
Name: 124265803
Synonym: Mpe_A0610
Alternate gene names: NA
Gene position: 642664-643941 (Clockwise)
Preceding gene: 124265802
Following gene: 124265807
Centisome position: 15.89
GC content: 70.42
Gene sequence:
>1278_bases ATGAATGTCGCCTATCTCGACCCTCCTTACAGCCGCTACTTCCACGAGCTGGCGGCGCGGTTGGCTCGGCCTTCGGGCGG CAGTGTCGTCGCCCTGCTGTCCTGTCCGGCCTATCGCCTGTACGCGGGGGGCGACCGCGCGCAGGTCTGGGAGCCGGGTG CGCCGGCGCAGGCGCACGACGTGCCACCGGCCTTCGAGCGGGCGGGCTGGGCGCAGACCGACTCGCCGGAATTCCGGCGC GCCTTCTCGCACGCCGTGGAGTGGTTCAAGGAGCGTTTCACCGCTGAACACACCGACGTCTGCCTGGTGTTCTCCGATGC CCGGCCGTTCTCGCAGGCGGCGCACCTGGCGGCGCAGCAGCTGGGCGTCGTCTGCGTGTTCTTCGAGCGCGGCGCCTTCC GCTACCGCACCGCGAGCCTGAGCACGCAGGGGCTCAATGCGCGCTTCTGCCTGCAGCAGGCGCAGCAATCGCCCCTGCTC GAGGCGCTCCCGCTCTTCGATCTGCCGCCGCGCCGGGCGATCGAGCCCTGGTTGAAGCTGCGTTTCGTGGGCTTCATGGC GCTCAACGGCCTGCTCGGCGCGCTGCAGCCGCAGCGCCGGCCGATGCAGCACAAGAGCTACCACTTCTTCAACTACCTGC GCATCGCCCTCAAGCAGTTCGGCGCCGAGCATCCCGAACTGCCGCTCGCGCAGGCCCCGGAACCGCCGGCCACCGACGGG CCGGTGGTGGTGCTGCCGCTGCAGCTGCCGACGGATTCGCAGTTCGTCATGTACTCGCCGTTCCGGCACAACCAGGAACT GATCGATTTCGTGGCCCGTCAGATGCGGAACGCGCTGCCCGGGACCCCGCTGCTGGTGAAGAAGCACCCGATGGATGTGC GCAGCTACCGGCTGCCGGCCGGCGCGCGCTGGATCGACGGCAGCCTGGCGCGCTTCAACGAGCGTCCCGCGGTGTTCGTC TGCCTCAATTCGAACGTGGGCTTCGAGGCGGCGATCCATGGCAAGCCGGTGCTGTGCTTCGCCGACAGCTTCTACACCGG CCACCCGAGCGTGACGCGGGTGAGCCGCGAGGACTTCGCACCACAGCTCGCGGCCGCGGCGGCGCGGCCCGATGACCTGG CGGCGGGCAGGGCACTGCGCGCGGCCGTGCTGCGGCATTGCCAGGCGCCGGGCGACGTGTGGGCCTACAGCGCCGAAGAC TTGGCACTGACGCGGGACATCGTGGCGACGCACTACGATGCGGCCCGGCTGTCGTCCGGGGCTGCGCCGCCTGCCTGA
Upstream 100 bases:
>100_bases ATGTGCGCAGTGCCGGAGTACCGGGCTGTCGGCGAGACCATCGCGGCCGCTTCCTCGGGTGACGTGCCTTTTCCTGTGGA CCCGGAATAGATCGCTCGGC
Downstream 100 bases:
>100_bases CGCGGTCCGGCCGCCCCTCAGTCGTCGAGGCCTGCCAGGGTCGCGGCCACTTCCGCGGGCAGCGGCGTGAACAGCGCGTC GCCCCGCAGGAGGTGAGCGA
Product: putative capsule polysaccharide export protein
Products: NA
Alternate protein names: Capsule Polysaccharide Export Protein
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MNVAYLDPPYSRYFHELAARLARPSGGSVVALLSCPAYRLYAGGDRAQVWEPGAPAQAHDVPPAFERAGWAQTDSPEFRR AFSHAVEWFKERFTAEHTDVCLVFSDARPFSQAAHLAAQQLGVVCVFFERGAFRYRTASLSTQGLNARFCLQQAQQSPLL EALPLFDLPPRRAIEPWLKLRFVGFMALNGLLGALQPQRRPMQHKSYHFFNYLRIALKQFGAEHPELPLAQAPEPPATDG PVVVLPLQLPTDSQFVMYSPFRHNQELIDFVARQMRNALPGTPLLVKKHPMDVRSYRLPAGARWIDGSLARFNERPAVFV CLNSNVGFEAAIHGKPVLCFADSFYTGHPSVTRVSREDFAPQLAAAAARPDDLAAGRALRAAVLRHCQAPGDVWAYSAED LALTRDIVATHYDAARLSSGAAPPA
Sequences:
>Translated_425_residues MNVAYLDPPYSRYFHELAARLARPSGGSVVALLSCPAYRLYAGGDRAQVWEPGAPAQAHDVPPAFERAGWAQTDSPEFRR AFSHAVEWFKERFTAEHTDVCLVFSDARPFSQAAHLAAQQLGVVCVFFERGAFRYRTASLSTQGLNARFCLQQAQQSPLL EALPLFDLPPRRAIEPWLKLRFVGFMALNGLLGALQPQRRPMQHKSYHFFNYLRIALKQFGAEHPELPLAQAPEPPATDG PVVVLPLQLPTDSQFVMYSPFRHNQELIDFVARQMRNALPGTPLLVKKHPMDVRSYRLPAGARWIDGSLARFNERPAVFV CLNSNVGFEAAIHGKPVLCFADSFYTGHPSVTRVSREDFAPQLAAAAARPDDLAAGRALRAAVLRHCQAPGDVWAYSAED LALTRDIVATHYDAARLSSGAAPPA >Mature_425_residues MNVAYLDPPYSRYFHELAARLARPSGGSVVALLSCPAYRLYAGGDRAQVWEPGAPAQAHDVPPAFERAGWAQTDSPEFRR AFSHAVEWFKERFTAEHTDVCLVFSDARPFSQAAHLAAQQLGVVCVFFERGAFRYRTASLSTQGLNARFCLQQAQQSPLL EALPLFDLPPRRAIEPWLKLRFVGFMALNGLLGALQPQRRPMQHKSYHFFNYLRIALKQFGAEHPELPLAQAPEPPATDG PVVVLPLQLPTDSQFVMYSPFRHNQELIDFVARQMRNALPGTPLLVKKHPMDVRSYRLPAGARWIDGSLARFNERPAVFV CLNSNVGFEAAIHGKPVLCFADSFYTGHPSVTRVSREDFAPQLAAAAARPDDLAAGRALRAAVLRHCQAPGDVWAYSAED LALTRDIVATHYDAARLSSGAAPPA
Specific function: Unknown
COG id: COG3562
COG function: function code M; Capsule polysaccharide export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47037; Mature: 47037
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVAYLDPPYSRYFHELAARLARPSGGSVVALLSCPAYRLYAGGDRAQVWEPGAPAQAHD CCCEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCCCC VPPAFERAGWAQTDSPEFRRAFSHAVEWFKERFTAEHTDVCLVFSDARPFSQAAHLAAQQ CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH LGVVCVFFERGAFRYRTASLSTQGLNARFCLQQAQQSPLLEALPLFDLPPRRAIEPWLKL HCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH RFVGFMALNGLLGALQPQRRPMQHKSYHFFNYLRIALKQFGAEHPELPLAQAPEPPATDG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PVVVLPLQLPTDSQFVMYSPFRHNQELIDFVARQMRNALPGTPLLVKKHPMDVRSYRLPA CEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHEECCC GARWIDGSLARFNERPAVFVCLNSNVGFEAAIHGKPVLCFADSFYTGHPSVTRVSREDFA CCCCCCCHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCEECCHHHHH PQLAAAAARPDDLAAGRALRAAVLRHCQAPGDVWAYSAEDLALTRDIVATHYDAARLSSG HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCHHHHCCC AAPPA CCCCC >Mature Secondary Structure MNVAYLDPPYSRYFHELAARLARPSGGSVVALLSCPAYRLYAGGDRAQVWEPGAPAQAHD CCCEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCCCC VPPAFERAGWAQTDSPEFRRAFSHAVEWFKERFTAEHTDVCLVFSDARPFSQAAHLAAQQ CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH LGVVCVFFERGAFRYRTASLSTQGLNARFCLQQAQQSPLLEALPLFDLPPRRAIEPWLKL HCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH RFVGFMALNGLLGALQPQRRPMQHKSYHFFNYLRIALKQFGAEHPELPLAQAPEPPATDG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PVVVLPLQLPTDSQFVMYSPFRHNQELIDFVARQMRNALPGTPLLVKKHPMDVRSYRLPA CEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHEECCC GARWIDGSLARFNERPAVFVCLNSNVGFEAAIHGKPVLCFADSFYTGHPSVTRVSREDFA CCCCCCCHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCEECCHHHHH PQLAAAAARPDDLAAGRALRAAVLRHCQAPGDVWAYSAEDLALTRDIVATHYDAARLSSG HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCHHHHCCC AAPPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA