| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265687
Identifier: 124265687
GI number: 124265687
Start: 535465
End: 535941
Strand: Reverse
Name: 124265687
Synonym: Mpe_A0494
Alternate gene names: NA
Gene position: 535941-535465 (Counterclockwise)
Preceding gene: 124265688
Following gene: 124265686
Centisome position: 13.25
GC content: 72.54
Gene sequence:
>477_bases ATGCAACACCCCCCGAAAGCCGACCGCCGCCGCACCCTGACCCGCCTGTGTGCGCTGCTCGCGATACCGGTCCTGCCCGC GTCGGCCGAGCCCGGCCGGCCGCTGATCGACGTCTGGAAGAGCCCGACCTGCGGCTGCTGCAAGGACTGGATCCGGCATC TCGAAGCCCACGGCTTCATGGTGCGGGCCCACGACGACGGCAACACCGATGCGCGAGCCCGCCTGGGCATGCCGCTGCGC TACGGCTCGTGCCACACCGCGAGCGTGGGCGGCTATGCGATCGAGGGCCATGTGCCGGCGCGCGAGGTGCGGCGACTGCT GAGGGAGCGGCCACAGGCCGTGGGGCTGGCCGTGCCGGCCATGCCGATCGGTTCGCCCGGCATGGACGGCCCGGAGTACG GCGGCCGCCGAGATCCCTACGAGGTACTGCTGGTGCAGCGCGACGGCCGTTCGGCCGTCTACCAGGCCTACCCCTGA
Upstream 100 bases:
>100_bases CCGCGAGATCGAGGTCCAGGTCCGCAAGCCCGACCGGCACGGCCCGCACTGACGCAGGCCCGGCCTGCCCCGACCACCAC TTCAGCGATCAGAACCAACC
Downstream 100 bases:
>100_bases ACGGGACCCGCGACACGGAGCCGCCCGATGAAGAAAAGCCCCATGACCGCCCTGCTGCTCGCCGCCGCCACGACGCTGGC GGGTGCCCAGCCCCTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MQHPPKADRRRTLTRLCALLAIPVLPASAEPGRPLIDVWKSPTCGCCKDWIRHLEAHGFMVRAHDDGNTDARARLGMPLR YGSCHTASVGGYAIEGHVPAREVRRLLRERPQAVGLAVPAMPIGSPGMDGPEYGGRRDPYEVLLVQRDGRSAVYQAYP
Sequences:
>Translated_158_residues MQHPPKADRRRTLTRLCALLAIPVLPASAEPGRPLIDVWKSPTCGCCKDWIRHLEAHGFMVRAHDDGNTDARARLGMPLR YGSCHTASVGGYAIEGHVPAREVRRLLRERPQAVGLAVPAMPIGSPGMDGPEYGGRRDPYEVLLVQRDGRSAVYQAYP >Mature_158_residues MQHPPKADRRRTLTRLCALLAIPVLPASAEPGRPLIDVWKSPTCGCCKDWIRHLEAHGFMVRAHDDGNTDARARLGMPLR YGSCHTASVGGYAIEGHVPAREVRRLLRERPQAVGLAVPAMPIGSPGMDGPEYGGRRDPYEVLLVQRDGRSAVYQAYP
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17373; Mature: 17373
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHPPKADRRRTLTRLCALLAIPVLPASAEPGRPLIDVWKSPTCGCCKDWIRHLEAHGFM CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCEE VRAHDDGNTDARARLGMPLRYGSCHTASVGGYAIEGHVPAREVRRLLRERPQAVGLAVPA EEECCCCCCCCHHHCCCCEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHCEEECCC MPIGSPGMDGPEYGGRRDPYEVLLVQRDGRSAVYQAYP CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCC >Mature Secondary Structure MQHPPKADRRRTLTRLCALLAIPVLPASAEPGRPLIDVWKSPTCGCCKDWIRHLEAHGFM CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCEE VRAHDDGNTDARARLGMPLRYGSCHTASVGGYAIEGHVPAREVRRLLRERPQAVGLAVPA EEECCCCCCCCHHHCCCCEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHCEEECCC MPIGSPGMDGPEYGGRRDPYEVLLVQRDGRSAVYQAYP CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA