Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265574

Identifier: 124265574

GI number: 124265574

Start: 414832

End: 415929

Strand: Reverse

Name: 124265574

Synonym: Mpe_A0381

Alternate gene names: NA

Gene position: 415929-414832 (Counterclockwise)

Preceding gene: 124265577

Following gene: 124265569

Centisome position: 10.28

GC content: 69.85

Gene sequence:

>1098_bases
GTGGAACAGATTACTGCAAGGCCAATCGTTCGAGTAGGGGTGGATCTGGCCAAGCGCTTGATGCAGGTGCACGCGGTGGA
CGCGGTCGGGCGGGTGGTGACGGCGCGCGCGCTGGCACGCGAGAAGTTCCTGCCGTGGTGCGCGCAGTTGCCGCCGGGCT
GCGTCGTGGCGATGGAGACCTGTGGCGGTGCGCACCACTGGGCGCGCCGATTGAGGGCCATGGGTCTGGAGTCCCGGCTC
GTCGCCGGCCACTTCGTCGGCCCGTACCGCATGGAAGGCCGGCGCGGCAAGAACGACGCCAACGACGCGGCCGCGGTGTG
TGAAGCCGCGGGCCGCCCGCACATGCGTTTCGTGCCGACCAAGACCGCCGAGCAGCAAGCCGTGCTGGCCGTGCACCGGC
TGCGCGAAGGTGTCAAGGAAGAACGCACCGCGTGCATCAACCGCATCCGCGGGTTGCTCGCCGAGTTCGGCCTGGTCTTC
GCGCAACGTCCCGAAGTGCTGCGCACCGAGCTGGCCGACGTCATCGAGGACGCAAGCAACGAGCTGCCGCACCTGGCGCG
CGTGGCGCTGCAGCGTGCTCAGCTGCAATGGAGCGAGCTGGAAGGCCACCTCGCCTGGTGCGACGAGCGCATCGCGGCGC
ACGTCAAGACGGACGAGCAAGCCAAGACGGCAGCGCAGCTCATGGGGATCGGGCCGGTCACGGCCTCCGCGCTGGCCGCC
AGCGTGGGCGAGTTCCGGCAGTTCCGCACCGGCGCGCAGTTCGGCGCCTGGCTCGGGCTGGTGCCGAGCCAGCACTCCAG
CGGCGGCAAGACCAGCCTCGGGCGCATCACCAAGCGCGGCGACGACTACCTGCGCACGCTGCTGATTCAAGGGGCGAAGT
CGGCGGTGATGACGGCGCACAAGCGACGAGACCGGATCTCGCAGTGGCTGGTTCAGCTCACGGCGCGTGTGGGCTGGCAA
AAGGCCGTGGTGGCCATGGCCAACAAGAACGCGCGCATCCTGTGGGCGGTGCTGGCCAGGGGGCGGCGCTTCGACGCCGA
TCACGTCTCGGTCAAGCCCGATGGTTGCGCGATGGCTGTCCCGGCCACGGCGGCCTGA

Upstream 100 bases:

>100_bases
AGCGAATACGAAGGGACTTCCCACCTTCGGGCCACGGCGTCAAAGCGCCAAGATTGGTGGTGTCGAGTCATCAATCTCAA
GCCATTGAAAGGGGAAGTCC

Downstream 100 bases:

>100_bases
CCAACGACCCAGGCATCTGACGAAAATCGATCTTCCCGAGGACGTGCGCACGTAGATGCATCCACAGGTCAGACCGGCGG
CGGGCTAGCTCGACTAACCC

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MEQITARPIVRVGVDLAKRLMQVHAVDAVGRVVTARALAREKFLPWCAQLPPGCVVAMETCGGAHHWARRLRAMGLESRL
VAGHFVGPYRMEGRRGKNDANDAAAVCEAAGRPHMRFVPTKTAEQQAVLAVHRLREGVKEERTACINRIRGLLAEFGLVF
AQRPEVLRTELADVIEDASNELPHLARVALQRAQLQWSELEGHLAWCDERIAAHVKTDEQAKTAAQLMGIGPVTASALAA
SVGEFRQFRTGAQFGAWLGLVPSQHSSGGKTSLGRITKRGDDYLRTLLIQGAKSAVMTAHKRRDRISQWLVQLTARVGWQ
KAVVAMANKNARILWAVLARGRRFDADHVSVKPDGCAMAVPATAA

Sequences:

>Translated_365_residues
MEQITARPIVRVGVDLAKRLMQVHAVDAVGRVVTARALAREKFLPWCAQLPPGCVVAMETCGGAHHWARRLRAMGLESRL
VAGHFVGPYRMEGRRGKNDANDAAAVCEAAGRPHMRFVPTKTAEQQAVLAVHRLREGVKEERTACINRIRGLLAEFGLVF
AQRPEVLRTELADVIEDASNELPHLARVALQRAQLQWSELEGHLAWCDERIAAHVKTDEQAKTAAQLMGIGPVTASALAA
SVGEFRQFRTGAQFGAWLGLVPSQHSSGGKTSLGRITKRGDDYLRTLLIQGAKSAVMTAHKRRDRISQWLVQLTARVGWQ
KAVVAMANKNARILWAVLARGRRFDADHVSVKPDGCAMAVPATAA
>Mature_365_residues
MEQITARPIVRVGVDLAKRLMQVHAVDAVGRVVTARALAREKFLPWCAQLPPGCVVAMETCGGAHHWARRLRAMGLESRL
VAGHFVGPYRMEGRRGKNDANDAAAVCEAAGRPHMRFVPTKTAEQQAVLAVHRLREGVKEERTACINRIRGLLAEFGLVF
AQRPEVLRTELADVIEDASNELPHLARVALQRAQLQWSELEGHLAWCDERIAAHVKTDEQAKTAAQLMGIGPVTASALAA
SVGEFRQFRTGAQFGAWLGLVPSQHSSGGKTSLGRITKRGDDYLRTLLIQGAKSAVMTAHKRRDRISQWLVQLTARVGWQ
KAVVAMANKNARILWAVLARGRRFDADHVSVKPDGCAMAVPATAA

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 39906; Mature: 39906

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQITARPIVRVGVDLAKRLMQVHAVDAVGRVVTARALAREKFLPWCAQLPPGCVVAMET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEHH
CGGAHHWARRLRAMGLESRLVAGHFVGPYRMEGRRGKNDANDAAAVCEAAGRPHMRFVPT
CCCHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEECCC
KTAEQQAVLAVHRLREGVKEERTACINRIRGLLAEFGLVFAQRPEVLRTELADVIEDASN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
ELPHLARVALQRAQLQWSELEGHLAWCDERIAAHVKTDEQAKTAAQLMGIGPVTASALAA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
SVGEFRQFRTGAQFGAWLGLVPSQHSSGGKTSLGRITKRGDDYLRTLLIQGAKSAVMTAH
HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCHHHHHHHHH
KRRDRISQWLVQLTARVGWQKAVVAMANKNARILWAVLARGRRFDADHVSVKPDGCAMAV
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEEC
PATAA
CCCCC
>Mature Secondary Structure
MEQITARPIVRVGVDLAKRLMQVHAVDAVGRVVTARALAREKFLPWCAQLPPGCVVAMET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEHH
CGGAHHWARRLRAMGLESRLVAGHFVGPYRMEGRRGKNDANDAAAVCEAAGRPHMRFVPT
CCCHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEECCC
KTAEQQAVLAVHRLREGVKEERTACINRIRGLLAEFGLVFAQRPEVLRTELADVIEDASN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
ELPHLARVALQRAQLQWSELEGHLAWCDERIAAHVKTDEQAKTAAQLMGIGPVTASALAA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH
SVGEFRQFRTGAQFGAWLGLVPSQHSSGGKTSLGRITKRGDDYLRTLLIQGAKSAVMTAH
HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHCHHHHHHHHH
KRRDRISQWLVQLTARVGWQKAVVAMANKNARILWAVLARGRRFDADHVSVKPDGCAMAV
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEEC
PATAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]