| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is lldD [H]
Identifier: 124265553
GI number: 124265553
Start: 395603
End: 396715
Strand: Reverse
Name: lldD [H]
Synonym: Mpe_A0360
Alternate gene names: 124265553
Gene position: 396715-395603 (Counterclockwise)
Preceding gene: 124265554
Following gene: 124265552
Centisome position: 9.81
GC content: 69.81
Gene sequence:
>1113_bases ATGTTCTACGACTACGCCGACTCGGGCTCCTGGACCGAGGGCACCTACCGCGCCAACGAGACCGACTTCGCCCGCATCCT GCTGCGCCAGCGCGTGGCGGTGAACATGGAGGGCCGCTCGCTGCGCACCACCCTGGCCGGCCAGGACTGCGCCATGCCGG TCGTGATCGCCCCCACCGGCCTGACCGGCATGCAGCACGCCGACGGCGAGATCCTGGGCGCGCGCGCGGCCGAGGCCTTC GGGGTGCCGTTCACGCTGTCGACGATGAGCATCTGCTCGATCGAGGACATCGCCGCGCACACGAAGGCGCCGTTCTGGTT CCAGCTGTACTGGATGCGCGACCGCGATTTCATGGAGCGGCTGATCGAGCGAGCCAAGGCGGCACGCTGCTCGGCGCTGG TGCTGACGCTGGACCTGCAGGTGCTGGGGCAGCGCCACAAGGATCTGAAGAACGGCATGACGGCGCCGCCCAAGCCGACG CTGGCGAACCTGATCAACCTGGCGATGAAGCCGCGCTGGTGCCTGGGGATGGCCGGGACGCGGCGCCACAGCTTCGGCAA CCTGGTGGGGCATGCCAAGGGGGTGAGCGACATGTCTTCGCTGGGGACGTGGACGAAGGAGCAGTTCGATCCGCGGCTGA GCTGGGACGATGTGGCGTGGATCAAGCAGCGCTGGGGCGGCCGGCTGATCCTGAAGGGGATCATGGAGGTGGCCGACGCG AAGCTGGCGGCCGACAGCGGGGCCGACGCGATCGTGGTGTCGAACCACGGGGGGAGGCAGCTCGATGGGGCGCCGTCCTC GATCGCGGCGCTGCCGGCGATCGCCGAGGCGGTGGGCGACCGGATCGAGGTGTGGATGGACGGGGGGATCCGCTCGGGCC AGGACGTGCTCAAGGCGGTGGCCCTGGGAGCGCGCGGCACGATGATCGGGCGGGCCTTCCTGTACGGGCTGGGCGCGATG GGCCAGGCCGGCGTGACACGCGCCCTCGAGATCATCCGCAACGAGCTCGACATCACCATGGCCTTCACCGGCCATACCGA TATCAGACGGGTGGGGCGCGAGATCCTGCTGAACGCGCCGACGCCGCCTGTCCGCACGGACCGAGGGAGGTGA
Upstream 100 bases:
>100_bases TGCCGGACCGCGCACGCCCCGCCACTGCGACGCCACTCCCATGCCCGTGATCACCTGCATCGAAGACCTGAGGGTTCTGG CCCGGCGCCGGGTGCCGAGG
Downstream 100 bases:
>100_bases GCCCGCCCTCGATCCCGACGCACGCACACCCCACCGACAAAAGACACACCGGCCGCCCGGCCCCCGACGGGCGCATGCGG CCGCGCATCGAACACCAACA
Product: L-lactate dehydrogenase (cytochrome)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MFYDYADSGSWTEGTYRANETDFARILLRQRVAVNMEGRSLRTTLAGQDCAMPVVIAPTGLTGMQHADGEILGARAAEAF GVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMERLIERAKAARCSALVLTLDLQVLGQRHKDLKNGMTAPPKPT LANLINLAMKPRWCLGMAGTRRHSFGNLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGIMEVADA KLAADSGADAIVVSNHGGRQLDGAPSSIAALPAIAEAVGDRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAM GQAGVTRALEIIRNELDITMAFTGHTDIRRVGREILLNAPTPPVRTDRGR
Sequences:
>Translated_370_residues MFYDYADSGSWTEGTYRANETDFARILLRQRVAVNMEGRSLRTTLAGQDCAMPVVIAPTGLTGMQHADGEILGARAAEAF GVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMERLIERAKAARCSALVLTLDLQVLGQRHKDLKNGMTAPPKPT LANLINLAMKPRWCLGMAGTRRHSFGNLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGIMEVADA KLAADSGADAIVVSNHGGRQLDGAPSSIAALPAIAEAVGDRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAM GQAGVTRALEIIRNELDITMAFTGHTDIRRVGREILLNAPTPPVRTDRGR >Mature_370_residues MFYDYADSGSWTEGTYRANETDFARILLRQRVAVNMEGRSLRTTLAGQDCAMPVVIAPTGLTGMQHADGEILGARAAEAF GVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMERLIERAKAARCSALVLTLDLQVLGQRHKDLKNGMTAPPKPT LANLINLAMKPRWCLGMAGTRRHSFGNLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGIMEVADA KLAADSGADAIVVSNHGGRQLDGAPSSIAALPAIAEAVGDRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAM GQAGVTRALEIIRNELDITMAFTGHTDIRRVGREILLNAPTPPVRTDRGR
Specific function: Unknown
COG id: COG1304
COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]
Homologues:
Organism=Homo sapiens, GI11068137, Length=360, Percent_Identity=34.7222222222222, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI54234014, Length=354, Percent_Identity=35.8757062146893, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI7705393, Length=354, Percent_Identity=35.8757062146893, Blast_Score=209, Evalue=3e-54, Organism=Escherichia coli, GI1790033, Length=360, Percent_Identity=44.1666666666667, Blast_Score=313, Evalue=1e-86, Organism=Caenorhabditis elegans, GI193208036, Length=354, Percent_Identity=38.135593220339, Blast_Score=227, Evalue=7e-60, Organism=Caenorhabditis elegans, GI32566217, Length=271, Percent_Identity=35.4243542435424, Blast_Score=148, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6323587, Length=363, Percent_Identity=31.6804407713499, Blast_Score=176, Evalue=5e-45, Organism=Drosophila melanogaster, GI281363140, Length=346, Percent_Identity=37.8612716763006, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI78707190, Length=346, Percent_Identity=37.8612716763006, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI78707188, Length=346, Percent_Identity=37.8612716763006, Blast_Score=229, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR012133 - InterPro: IPR000262 - InterPro: IPR008259 - InterPro: IPR020920 [H]
Pfam domain/function: PF01070 FMN_dh [H]
EC number: =1.1.2.3 [H]
Molecular weight: Translated: 40308; Mature: 40308
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00557 FMN_HYDROXY_ACID_DH ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYDYADSGSWTEGTYRANETDFARILLRQRVAVNMEGRSLRTTLAGQDCAMPVVIAPTG CCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCC LTGMQHADGEILGARAAEAFGVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMER CCCCCCCCCCEEECHHHHHCCCCEEECHHHHHCHHHHHHHCCCCEEEEEEEECCHHHHHH LIERAKAARCSALVLTLDLQVLGQRHKDLKNGMTAPPKPTLANLINLAMKPRWCLGMAGT HHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCC RRHSFGNLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGIMEVADA CCCHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH KLAADSGADAIVVSNHGGRQLDGAPSSIAALPAIAEAVGDRIEVWMDGGIRSGQDVLKAV HHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHH ALGARGTMIGRAFLYGLGAMGQAGVTRALEIIRNELDITMAFTGHTDIRRVGREILLNAP HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEECCC TPPVRTDRGR CCCCCCCCCC >Mature Secondary Structure MFYDYADSGSWTEGTYRANETDFARILLRQRVAVNMEGRSLRTTLAGQDCAMPVVIAPTG CCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCC LTGMQHADGEILGARAAEAFGVPFTLSTMSICSIEDIAAHTKAPFWFQLYWMRDRDFMER CCCCCCCCCCEEECHHHHHCCCCEEECHHHHHCHHHHHHHCCCCEEEEEEEECCHHHHHH LIERAKAARCSALVLTLDLQVLGQRHKDLKNGMTAPPKPTLANLINLAMKPRWCLGMAGT HHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCCCC RRHSFGNLVGHAKGVSDMSSLGTWTKEQFDPRLSWDDVAWIKQRWGGRLILKGIMEVADA CCCHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH KLAADSGADAIVVSNHGGRQLDGAPSSIAALPAIAEAVGDRIEVWMDGGIRSGQDVLKAV HHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHH ALGARGTMIGRAFLYGLGAMGQAGVTRALEIIRNELDITMAFTGHTDIRRVGREILLNAP HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEECCC TPPVRTDRGR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA