| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is gpmB [H]
Identifier: 124265523
GI number: 124265523
Start: 361175
End: 361876
Strand: Reverse
Name: gpmB [H]
Synonym: Mpe_A0330
Alternate gene names: 124265523
Gene position: 361876-361175 (Counterclockwise)
Preceding gene: 124265524
Following gene: 124265522
Centisome position: 8.95
GC content: 71.65
Gene sequence:
>702_bases ATGCCGCAGTCGCAACTCACCCGCATCGTCGCGGTACGCCACGGCGAGACCGCGTGGAACGTCGACACGCGCATCCAGGG CCAGCTCGACATCGGCCTGAACGACAAGGGCCGCTGGCAGGCCGGGCGCGTGGCGCAGGCCCTCAGCGGCGAAGGCCTCG ACGTGGTCTATGCCAGCGACTTGGCGCGCGCCCATGACACCGCACTCGCCATCGGCGCGGCCGCCGGGCTCGCGGTTCGG ACCGACCGCGGACTGCGCGAACGAGCCTTCGGTCGGTTCGAGGGCCAGACCTGGGCGGACATCGAGACCCACTGGCCCGC CGAGAGCGCGCGCTGGCGGGCGCGCGATGTCGACTTCGGCCCGGAAGGTGGCGAGACCTTGCGTGCCTTCTACGCGCGCG TGGTCGATACCGCCGAGCGGCTGGCAAGCCGCCATCCGGGCCAGGTGATCGCACTGGTGGCGCACGGCGGCGTGATGGAC TGTCTGTATCGCGCCGCAGCGCGCGTTGGCCTCGACGCGCCGCGCACCTGGCAGCTCGGCAACACCGCGGTCAACCGGCT GCTGTACACGCCCGAGGGCTTTACGCTGGTCGGCTGGAGCGACACCTCGCACCTCGATGGCCTGCAGCACGATGAGTTCA GCGACGGCGCCCGCGATAGCCAACCTGCCGCTGCGGGCGACAAGGTCGGCCACGCGGCCTGA
Upstream 100 bases:
>100_bases GCGCGCAAGTGCGGGCTGCGATGCGCGGCCATGTGCTGGCGGAGGCGTCCTTCAGCGGCGGCTACAGCCTCAACGCACGT CTGAACGCGAGCGGCACCTG
Downstream 100 bases:
>100_bases GTCGACTCGCCCGATGCGTCCTGCTCCCGCCCGGGTCGGTGATCCCGTTGACGCGATCGACAGCCCCGCGCTGGTGGTGG AAATCGACGCCTTCGAGCGA
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASDLARAHDTALAIGAAAGLAVR TDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFGPEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMD CLYRAAARVGLDAPRTWQLGNTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA
Sequences:
>Translated_233_residues MPQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASDLARAHDTALAIGAAAGLAVR TDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFGPEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMD CLYRAAARVGLDAPRTWQLGNTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA >Mature_232_residues PQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASDLARAHDTALAIGAAAGLAVRT DRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFGPEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMDC LYRAAARVGLDAPRTWQLGNTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=217, Percent_Identity=31.7972350230415, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786857, Length=173, Percent_Identity=30.0578034682081, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 25190; Mature: 25059
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASD CCHHHHEEEEEEECCCEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEHHH LARAHDTALAIGAAAGLAVRTDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFG HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCCCC PEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMDCLYRAAARVGLDAPRTWQLG CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECC NTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA HHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PQSQLTRIVAVRHGETAWNVDTRIQGQLDIGLNDKGRWQAGRVAQALSGEGLDVVYASD CHHHHEEEEEEECCCEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEHHH LARAHDTALAIGAAAGLAVRTDRGLRERAFGRFEGQTWADIETHWPAESARWRARDVDFG HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCCCC PEGGETLRAFYARVVDTAERLASRHPGQVIALVAHGGVMDCLYRAAARVGLDAPRTWQLG CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEECC NTAVNRLLYTPEGFTLVGWSDTSHLDGLQHDEFSDGARDSQPAAAGDKVGHAA HHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA